Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00473 ATGGTTTGCGAAATGGAGAATGACTGTATTGAGGACATGGACATTGAAGTCCTCTCTTCTATGTGGCCTGAAGATATTGGAAGTGATGCAGGAAAGCAGTTTAACATCGAGCGGCCAGGAAAGGATCAAGATATGCTGGAGGAGGTGACCATAATGGAGGAGCCAACTATAGTTGATTTCAAGCGTCTCATGGAGCTCACCAATTATACGGATACAGGGTCTTCTCAGCTAGCTTCACTCATGAAACATTGGGAATATAAGCAAGCCAATGCAGTACGACTTCTCAGAGAAGAACTAGACAACCTCAGCAAACAGAGGCGGGAAGTTGAGCTCAGGAAGTTGGAGATATTGGAAGAACATCGATTCGAGGAAGAAAGATATGGTCTTGATAAGCGGCCAGTTTCTATATTGGATGAAGTTTATGATTTATGGCAAGATTTGCCTCGCAGGAAAAATGATGTTGTTATCCAAAACAAGCGAATTGAAATAGATGCTGAGTATGATACTGTTGTGTACTGGAAACAACGAGCCCTGAATTTGGAGAAACTGCTGGAAGCAAGTGTCCAGAGAGAGCAGATTCTTTCAGAAAAATTGCAGGAAAGCATAATGAATCTTGAAAGGCAGTCCTCACCTGTGGAAGAACTGTCCCAGATTCTCAAGAGAGCAGataatttcttacattttataCTCCAAAATGCACCTGTTGTTATTGGCCATCAGgACAAAGAGTTGCGCTATCGCTTTATCTATAATCATTTTCCAAGTTTGCAAGAGGAGGACATTATAGGAAGAACAGATGTTGAAATTTTCACAGGATCTGGTGTCAAGGAATCTCAAGATTTCAAGAGAGAAGTTCTGGAAAAAGGACTGCCAGCAAAAAGAGAAATCACCTTTGAGACAGAATTATTTGGATCAAAGACATTCCTCATTTACGTAGAACCTGTCTTTAGCAAGGCAGGGGAGACAATTGGTATAAATTATATGGGAATGGATATAACAGATCAGgtaagaaaaagagaaaggatgGCAAAGATTCGGGAAGAGATTGCGGTTCAGAAAGCCAAAGAAACAGAACTGAATAAAACCATTCACATTACAGAGGAGACTATGCGAGCAAAACAGATGTTGGCAACAATGTCTCATGAGATAAGGTCTCCTCTGTCTGGGGTTGTTAGCATTGCTGAAATTCTTTCTACCACAAAACTTGATCGGGAACAAAAACAGCTCTTGAATGTCATGTTATCTTCGGGTGATTTGGTTCTTCAACTTATAAACGACATACTTGATCTTTCCAAGGTTGAGTCAGGAGTTATGAAGTTAGAAGCTACCAAATTCCGACCAAGAGAGGTAGTAAAGCATGTACTTCAGACCGCCGCAGCATCAATGCAGAAAATGTTAACCTTAGAAGGACATGTGGCAGATGATGTTCCCATTGAGGTGATTGGAGATGTATTAAGAATTCGACAAATTCTCACAAATTTAATCAGCAATGCAGTAAAGTTTACACATGAAGGCAAAGTTAGCATAGACCTTTACGTTGTTCCACAGCCATCATTTGCAAAAGCAGAAGAAAGCCAAAGCCAGCAGAAGATTCCTGCAGACAAATCAGGCGTTTCAGCCAATGgactaaaagaagaaaaatatcatccaACATCTCAAAACAGCAGCAATCAAAATTCTGTTGATGGGCAAAAACTTGCTGACCATTCCAACCGAAATCATGTATTCGGCGATGAATGCAGATCTCCGGTGAAGAGTGAATGCTCAGTGAATGGAGATACTGAGGACAGACATCATTCAATTGAAACAACAGCGTGGATACGTTGTGATGTGCGTGACACGGGAATTGGAATACCAGAAAATGCTATACCTACTTTATTTAAGAGGTACATGCAAGTCAGTGCTGACCACGCTCGAAAGTATGGTGGCACAGGGTTAGGGCTAGCAATATGCAAACAACTGGTTGAGTTGATGGGGGGTCGTCTAACGGTGTCCAGCAAAGAACATCATGGTTCTACATTCACATTTATTCTACCATACAAGGTTTCAACCGCTTGCGATCATTCCGAGGATTCCGATGAGCTCTCAGACATGGAAAACGATGACGACGACGACGATACCACTGAGGGTTTCTTTCAATTCCAACCACGCACTTTGGGCTCTCTGTTCTCTTCCAATGGGTCGAGCCGAACCCAGAGATTACTACCACACAAAATTGGGTCGCATAAATTTAATGGCTTTTCAGCGAATAATTACTCATTCCCCTCTCCTAATAACACGAGACCAAGAGGGTCGCCTTCAGTTGAAGATGCATCCTTCCTCGTTGATGCTCCGGAGATGTCCGAATCAGCAAGCTCATCAAGTCAGCACAGCACAGAGACAGAGAACGAGAATGTAATTAGTAAGGGCAAACAGGGTCAAGATAAGACATATGCTCAATCACATAATGGCAGTGTCAGCACAGATTCTTGTCATCTTAAGGAGGAAACTAGAGAAATGGGTGTAACaacaaaatcaatccaaacccAGCAAACATGTCAGAGTCAAGACAAGTCAAATATAACTTTGCAATGTGTTACCAGCAGCAAAACATCAGGAGTATCCCAACCTACATCAAAGACTAGGATTCTTCTTGTTGAAGACAATAAGATCAATGTAATGGTGACACAGTCTATGATGAAGCAGTTAGGCCAAAGCATAGACGTTGTCAATAACGGAATTGAAGCCGTTCGTGCAGTTCAGCGCCGTAGTTATGATCTTGTTCTCATGGATGTGTGCATGCCAGTTATGACTGGCCTCGAGGCTACAAAGCTTATTAGATCTTTTGAGGAAACTGGCAACTGGGAGGCTGCGTCAAGAGCTGGAATTGAGCCTGCCCTACCCATGTCAGATTTGTCACATGATAATGAAGGTCCTTTAACTTCCAGAAAGCGGATTCCCATCATCGCGATGACAGCAAATTCTTTGTCGGAGAGTGCAGAAGAGTGTTATGCACACGGCATGGACTCATTTGTGTCAAAGCCTGTGACtttccaaaaattgaaagaatgcCTCGAACAATATCTAGCGtg 3071 0.4122 MVCEMENDCIEDMDIEVLSSMWPEDIGSDAGKQFNIERPGKDQDMLEEVTIMEEPTIVDFKRLMELTNYTDTGSSQLASLMKHWEYKQANAVRLLREELDNLSKQRREVELRKLEILEEHRFEEERYGLDKRPVSILDEVYDLWQDLPRRKNDVVIQNKRIEIDAEYDTVVYWKQRALNLEKLLEASVQREQILSEKLQESIMNLERQSSPVEELSQILKRADNFLHFILQNAPVVIGHQDKELRYRFIYNHFPSLQEEDIIGRTDVEIFTGSGVKESQDFKREVLEKGLPAKREITFETELFGSKTFLIYVEPVFSKAGETIGINYMGMDITDQVRKRERMAKIREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSIAEILSTTKLDREQKQLLNVMLSSGDLVLQLINDILDLSKVESGVMKLEATKFRPREVVKHVLQTAAASMQKMLTLEGHVADDVPIEVIGDVLRIRQILTNLISNAVKFTHEGKVSIDLYVVPQPSFAKAEESQSQQKIPADKSGVSANGLKEEKYHPTSQNSSNQNSVDGQKLADHSNRNHVFGDECRSPVKSECSVNGDTEDRHHSIETTAWIRCDVRDTGIGIPENAIPTLFKRYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVSSKEHHGSTFTFILPYKVSTACDHSEDSDELSDMENDDDDDDTTEGFFQFQPRTLGSLFSSNGSSRTQRLLPHKIGSHKFNGFSANNYSFPSPNNTRPRGSPSVEDASFLVDAPEMSESASSSSQHSTETENENVISKGKQGQDKTYAQSHNGSVSTDSCHLKEETREMGVTTKSIQTQQTCQSQDKSNITLQCVTSSKTSGVSQPTSKTRILLVEDNKINVMVTQSMMKQLGQSIDVVNNGIEAVRAVQRRSYDLVLMDVCMPVMTGLEATKLIRSFEETGNWEAASRAGIEPALPMSDLSHDNEGPLTSRKRIPIIAMTANSLSESAEECYAHGMDSFVSKPVTFQKLKECLEQYLA 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00473 1023 CDD HisKA 373 432 IPR003661 GO:0000155|GO:0007165
Bva10g00473 1023 Coils Coil 92 119 - -
Bva10g00473 1023 MobiDBLite consensus disorder prediction 573 595 - -
Bva10g00473 1023 SMART HKATPase_4 482 682 IPR003594 -
Bva10g00473 1023 CDD REC_hyHK_CKI1_RcsC-like 876 1018 - -
Bva10g00473 1023 ProSiteProfiles Histidine kinase domain profile. 378 682 IPR005467 -
Bva10g00473 1023 SMART REC_2 874 1018 IPR001789 GO:0000160
Bva10g00473 1023 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 5 1022 - -
Bva10g00473 1023 Gene3D - 867 1023 - -
Bva10g00473 1023 Coils Coil 188 208 - -
Bva10g00473 1023 MobiDBLite consensus disorder prediction 692 709 - -
Bva10g00473 1023 MobiDBLite consensus disorder prediction 748 766 - -
Bva10g00473 1023 MobiDBLite consensus disorder prediction 748 825 - -
Bva10g00473 1023 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 457 679 IPR036890 -
Bva10g00473 1023 Gene3D PAS domain 212 348 - -
Bva10g00473 1023 MobiDBLite consensus disorder prediction 547 566 - -
Bva10g00473 1023 SMART HisKA_10 371 436 IPR003661 GO:0000155|GO:0007165
Bva10g00473 1023 CDD HATPase_EvgS-ArcB-TorS-like 487 679 - -
Bva10g00473 1023 PANTHER HISTIDINE KINASE CYTOKININ RECEPTOR 5 1022 - -
Bva10g00473 1023 Gene3D - 367 435 - -
Bva10g00473 1023 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 370 436 IPR036097 GO:0000155|GO:0007165
Bva10g00473 1023 Gene3D - 436 686 IPR036890 -
Bva10g00473 1023 MobiDBLite consensus disorder prediction 688 711 - -
Bva10g00473 1023 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 482 680 IPR003594 -
Bva10g00473 1023 ProSiteProfiles Response regulatory domain profile. 875 1022 IPR001789 GO:0000160
Bva10g00473 1023 MobiDBLite consensus disorder prediction 779 821 - -
Bva10g00473 1023 Pfam His Kinase A (phospho-acceptor) domain 373 436 IPR003661 GO:0000155|GO:0007165
Bva10g00473 1023 Pfam Response regulator receiver domain 876 944 IPR001789 GO:0000160
Bva10g00473 1023 PRINTS Bacterial sensor protein C-terminal signature 642 660 IPR004358 GO:0016310|GO:0016772
Bva10g00473 1023 PRINTS Bacterial sensor protein C-terminal signature 607 621 IPR004358 GO:0016310|GO:0016772
Bva10g00473 1023 PRINTS Bacterial sensor protein C-terminal signature 666 679 IPR004358 GO:0016310|GO:0016772
Bva10g00473 1023 SUPERFAMILY CheY-like 872 1022 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00473 Bva-Chr10 4731511 4737115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00473 1 545 Histidine Kinase Gene Family AT5G10720 68.991 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva10g00473 HATPase_c 1.2e-28 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00473 - - gmx:100796072 1491.48