Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00468 ATGGGCTATCTGAATTCCGTTTTGTCCTCTTCAAGCCAAATTCATGCTGCTGAAGATGCTCCTGTGAGCGGCGGGGGCCtcagTCAGAATGGCAAGTTCAGTTATGGGTATGCTAGCTCCCCTGGCAAGAGATCTTCAATGGAAGATTTCTATGAGACAAGAATTGATGGTGTTGATGGAGAAATTGTTGGCCTTTTCGGAGTTTTTGATGGTCACGGTGGTGCTCGGGCTGCTGAGTATGTTAAGCAAAACCTCTTCAGTAATTTGATCAGACATCCAAAATTTATATCTGATACGAAATCAGCTATAGCTGATGCATATACCCATACAGACTCCGAATTTctgaaattagaaaataaccaaaacaGGGATGCTGGATCAACTGCTTCCACTGCCATCCTAGTTGGGGACCGTTTACTTGTTGCAAATGTTGGTGACTCCAGAGCTGTAATATGCAGGGGTGGTAATGCCATTGCTGTTTCTCGAGATCACAAGCCAGATCAAACTGATGAGAGGCAGAGAATTGAAGATGCTGGGGGCTTTGTCATGTGGGCTGGAACTTGGAGAGTTGGTGGTGTTCTTGCTGTTTCTCGAGCATTTGGTGATAGACTCCTGAAGCCGTATGTTGTTGTTGATCCTGAAATCCAGGAAGTAAAAATTGATAGCTCTTTGGAGTTTCTTATACTAGCTAGTGATGGACTATGGGACGTTGTCTCAAATGAGGAAGCTGTTGCTATGATcaaaccaattggagatgcAGAGGAAGCAGCAAAGAGGTTGATGCAGGAGGCATATCACAGAGGTAGTTCTGATAATATCACTTGTGTTGTGGTCCGTTTCTTGATGAACCAAGGCACTTCTTCTCGTAGTAACAGCGCTGGTGTCCGTCAGTA 893 0.4278 MGYLNSVLSSSSQIHAAEDAPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEIVGLFGVFDGHGGARAAEYVKQNLFSNLIRHPKFISDTKSAIADAYTHTDSEFLKLENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKPYVVVDPEIQEVKIDSSLEFLILASDGLWDVVSNEEAVAMIKPIGDAEEAAKRLMQEAYHRAY 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00468 269 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 3 267 - -
Bva10g00468 269 Pfam Protein phosphatase 2C 63 267 IPR001932 -
Bva10g00468 269 SMART PP2C_4 24 268 IPR001932 -
Bva10g00468 269 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Bva10g00468 269 Gene3D - 26 269 IPR036457 -
Bva10g00468 269 CDD PP2Cc 33 269 IPR001932 -
Bva10g00468 269 SUPERFAMILY PP2C-like 28 267 IPR036457 -
Bva10g00468 269 PANTHER ALPHABET, ISOFORM E-RELATED 3 267 - -
Bva10g00468 269 ProSiteProfiles PPM-type phosphatase domain profile. 34 269 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00468 Bva-Chr10 4705995 4710729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00468 1 267 PP2C-type Phosphatase Gene Family AT4G31750 91.011 1.50e-179 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00468 K17506 - gmx:100795017 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00468 10 4705995 4710729 Bva10g00468 10 4705995 4710729 ECH