Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00452 ATGGGAATATATCTCAGCACTCCTAAAACTGAAAAATTTTCTGAAGACGGTGAGAATGACCGTCTTAGATATGGTTTATCATCCATGCAGGGGTGGCGTGCTACGATGGAAGATGCTCATGCTGCATATCCTGATCTGGATGCATCCACCTCATTTTTTGGTGTTTATGATGGTCATGGAGGTAAGGTGGTTGCAAAGTTTTGTGCCAAATTTCTTCACCAAGAAGTGCTCAAGAATGAAGCATATGCAGCTGGAGACGTAGGGACTGCTCTTCAAAAAGCTTTTTTTAGAATGGACGAGATGATGCGTGGTCAAAGGGGATGGAGGGAATTAGCAGTCTTGGGggataaaataaacaagtttACTGGGATGATAGAAGGGTTGATTTGGTCTCCTCGTGGCAGTGATAGTCATGAGCAAGCTGATGATTGGGCTTTTGAGGAGGGTCCTCATTCTGATTTTGCTGGACCAACTTCTGGGAGCACTGCCTGTGTTGCAATTATTAGAAACAACCAAATTTTTGTTGCAAATGCGGGTGATTCACGTTGTGTGATATCAAGGAAGGGTCAGGCTTACAATTTGTCAAGGGATCACAAACCTGATCTTGAgattgaaaaggaaagaattttaaaagctGGTGGTTTCATTCATGCTGGACGAGTTAATGGCAGTTTAAATCTTGCAAGAGCCATAGGTGACATGGAATTTAAACAGAATAAGTTTCTATCTGCTGATAAACAAATAGTGACTGCCAATCCTGATATAAACACTGTTGAGCTTTGTAACGATGATGAATTTCTGGTTCTAGCATGTGATGGCATCTGGGATTGCATGTCAAGCCAGCAATTGGTTGATTTCATTCATGAACAACTGCGCTCGGAAAATAAACTTTCTGTGGTTTGTGAGAGAGTACTTGACCGGTGTTTGGCACCATCAACTACTGGTGGTGAGGGTTGTGACAACATGACCATGATACTGGTGCAGTTCAAGAAACCAACCCAGTCAAAAGTGGAGAGCAGTGAAAGTTCCTA 1031 0.4122 MGIYLSTPKTEKFSEDGENDRLRYGLSSMQGWRATMEDAHAAYPDLDASTSFFGVYDGHGGKVVAKFCAKFLHQEVLKNEAYAAGDVGTALQKAFFRMDEMMRGQRGWRELAVLGDKINKFTGMIEGLIWSPRGSDSHEQADDWAFEEGPHSDFAGPTSGSTACVAIIRNNQIFVANAGDSRCVISRKGQAYNLSRDHKPDLEIEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSADKQIVTANPDINTVELCNDDEFLVLACDGIWDCMSSQQLVDFIHEQLRSENKLSVVCERVLDRCLAPSTTGGEGCDNMTMILVQFKKPTQSKVESSESS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00452 343 CDD PP2Cc 23 329 IPR001932 -
Bva10g00452 343 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Bva10g00452 343 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 336 - -
Bva10g00452 343 SMART PP2C_4 13 327 IPR001932 -
Bva10g00452 343 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Bva10g00452 343 Gene3D - 1 330 IPR036457 -
Bva10g00452 343 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Bva10g00452 343 Pfam Protein phosphatase 2C 137 314 IPR001932 -
Bva10g00452 343 PANTHER PROTEIN PHOSPHATASE 2C 1 336 IPR015655 GO:0004722|GO:0006470
Bva10g00452 343 SUPERFAMILY PP2C-like 3 331 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00452 Bva-Chr10 4629716 4635089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00452 1 342 PP2C-type Phosphatase Gene Family AT2G25070 78.363 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00452 K17499 - mnt:21408192 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00452 10 4629716 4635089 Bva06g02323 06 15025391 15030555 BWGD
Bva10g00452 10 4629716 4635089 Bva10g00452 10 4629716 4635089 ECH