Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00449 ATGGCTGCTTGTTCAAGAGCTTCTCTTGCCTTTCTATTCCTTCTTTTTGGCTTCTCTGTAGCTAAGGAAATAGTGGTTGGAGGGAAGACAGATGCTTGGAAGATCCCATCTTCTGAATCAGATTCTCTCAATCAATGGGCTGAAAGATCTCGTTTCCAAGTCGGCGATTATCTTGTGTGGAAATATGATGGTGGTAAAGACTCAGTTTTGCAAGTGAGCAAGGATGATTATGCTAATTGTAATATCTCAAACCCCATTAAGAAATACGATGATGGGAACACAAAGGTGGAGCTTGACCGTCCCGGAGCATTCTACTTCATCAGCGGGGCAAATGGACACTGTGAGAAGGGCCAAAAGTTCGTTGTGGTGGTTATGACTCCAAGAAATAGGCACATGGGCATTTCACCGGCACCTTCTCCGGCGGAGTTCGAAGGTCCATCTGCTGCTCCTAGTCCTACTAGCAGCGCCACAGCTTTGCAAGGTGGCCTCATGGTGGTGGGGGGAACATTGGCTATGTGGGTATTCTG 527 0.4725 MAACSRASLAFLFLLFGFSVAKEIVVGGKTDAWKIPSSESDSLNQWAERSRFQVGDYLVWKYDGGKDSVLQVSKDDYANCNISNPIKKYDDGNTKVELDRPGAFYFISGANGHCEKGQKFVVVVMTPRNRHMGISPAPSPAEFEGPSAAPSPTSSATALQGGLMVVGGTLAMWVF 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00449 175 CDD OsENODL1_like 22 125 IPR041846 -
Bva10g00449 175 Pfam Plastocyanin-like domain 33 118 IPR003245 GO:0009055
Bva10g00449 175 MobiDBLite consensus disorder prediction 133 155 - -
Bva10g00449 175 PANTHER EARLY NODULIN-LIKE PROTEIN 3 6 172 - -
Bva10g00449 175 ProSiteProfiles Phytocyanin domain profile. 22 126 IPR003245 GO:0009055
Bva10g00449 175 Gene3D - 20 129 IPR008972 -
Bva10g00449 175 PANTHER BLUE COPPER PROTEIN 6 172 IPR039391 GO:0009055
Bva10g00449 175 SUPERFAMILY Cupredoxins 21 125 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00449 Bva-Chr10 4619898 4620657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00449 12 172 Phytocyanin Superfamily AT2G25060 55.556 3.73e-63 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00449 - - gmx:100527857 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00449 10 4619898 4620657 Bva06g02326 06 15036745 15037570 BWGD
Bva10g00449 10 4619898 4620657 Bva10g00449 10 4619898 4620657 ECH