Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00442 ATGAGCTTGTTCTGGAAGTTCTTTCTTAAGAAGCCACCCGACGGGCTTCTAGAAATATCTGAAAGGGTTTATGTCTTCGATTACTGCTTCACCATGGATGTTTTGgaagaaagtaaatataaagagTATGTTGGGGGAATTATAAAACAACTTCACGATCACTTTCCTGATGCTTCATTTATGGTCTTTAACTTTCGGGAGGGAGACAATGAAAGCCAGATTGCAAGCATTTTGTGTGAGTATGATATGAATGTGGTGGACTATCCTCGACAGTATGAAGGTTGCCCGTTGCTTACCACGGAGATGATCCACCACTATTTGAGATCGGGTGAAAGCTGGCTTCAACTTGGGCAACAAAATGTTCTCTTGATGCATTGTGAACGATCTGGGTGGCCAGTTCTGGCATTTATGCTGGCTGCACTCTTGATTTATAGGAAGCAGTATACTGGGGAGCAGAAAACTTTAGACATGATATACAAGCAAGCAAATCCGGAACTATTGCAGTTGATGTCACCACTAAATCCATTACCCTCACAATTGAGGTATCTTCAGTATATATCGAGAAGAAATGTTGGTCCACAATGGCCTCCTTTAGATAGGGCACTTACATTGGATTGTGTTATTATAAGATTCATACCTAATATGGACGAAGAGGGTGGTTGCCGTCCTATATTTAGGATATATGGACCAGATCCTTTTATGGCTGCTGATCGGACATCCAAACTTCTCTTTTCGACTCCTAAAAGGAGCAAACTTGTTCGACATTACAAGCAGGCAGATTGTGAACTGGCGAAGATTGACATCCATTGCCATGTTCAAGGCGATGTTGTTCTTGAATGTATTAATCTGGGTGATGATTTGGAACGTGAACAAATGATTTTTCGAGTCATGTTTAATACAGCATTCATaagatcaaatattttaatgctGAACCGTGATGAAATTGACATATTATGGAACATTGCTAATGACCAGTTCCCAAAAGATTTTAGAGTAGAGGTTCTTTTCTCAGATATGGATGCTTCTTctgttatttcaattgatCTGCCTTGTATTGAGGACAAAGAAGGCCTTCCTGCTGAAGCATTTGCAAAGGTTCAAGAGATATTCAGCAACGTTGACTGGTTAGGTACAAAGACAGAGGTCGCCAATGTGCTCCAGCAGATCAAAGTATCAAATATCCTTCTGGAAAGATTGGACAGTGGGTTTTCTGCTACAACAAGTAGCTTGCTAAAGGAGTCATTGTCTGGAAAGTTTACATTTGAACCAAAGAGACTGCTAGAAAATGATATCAAGAATTTGGCATCTAACGTCCAGGGGAACCCATCTGATTCCTCATTTGAATCATCTGTAGAAacgcccctagaaaagaagaTTGAACCATTAGAACTGAAAACATTGTCTGAGAATAACATCAGGAACCCTGCATCCATAGGTCTGGGGAAACAATGCGTTCCCTTAGTTGGACTCTCAGTAGCATCAAATATCCTTTCTGAAAAGTTGGACAGCGGAGTTTCTGATGCAACAAGCAACTCTCCGAAGGAGTCATTGTCtggaaaatttgaattagAACCGAAGAGACCGCCAAGAATTGATATCAAGAATTTGGCATCTAATTTTCAGGGGATACCATCTGTTTCCTCGTTTCAGTCATCTTTTGATATTTCTCCTAATCAGAAGATAGAAACTACAATAGGAAAGGCATCATCTGAAAGTAACATCAAGAGTCCTGCATCTATAGGTCCAGGGAAACATTCTGTTTCCTCAATTGGACTTTTAACAAATTCAGATtctaataaaatgaagatTGAAGCCTTAGAATCATGGGAAGCAATAATGGATCAAGGGAAGCAATCTACTCCCTTAATTGAACCAGCCATGGATgggaatttgataaaaaagaagactGAGCCACTGGAATCAACGACAATGTCAGAAAATGATATCAAGAGCCCCACATCCTCACCTCAACTGAAACAATCTGTTCCTTCATTTCAACCTGCAATTGAtgcaaattcaattaaaaagaagattgAACCTCAAGAGTTGCGGGTTGTCCTTCAATTGCCTGCTCAATCTAAAATCATATCTCCACGGGTGCATCAAGCTTCTAGATCTGCACCAGTTCCTTATTGTACTTCTTTGCAAGGTTCAACGGTACCTATCTCAAGATATCAAAGTGCACCATCAGTTCTCGGAATAACAGCTTTGTTGCAGGATCATGTTGTAACGGATACCAAGGAAGAAGTTACTCATACAATAGCAGAGCCTACCCCTTCTACTGTTTCTCCTTCAGTCTCAAAGGTGCCAAGATCTATTGAGCCAAGTTCCTCGTGCATTCCTCCAGCATTGCTGCCATCTTTCTCATTAAAATCTTCATTGGATGCTTCTACTGCCGTAGAGAAGACTTTCAGGTCCATTGCTCTCACAACTGCTGCTACTCCTCCACCTCGTTGTCCTCCTCAATTGCATCAGCCTACTCCAAATTTGATGCAATCTGTGGCTGTCCAGCACCAAGAGATTACAATGCATGAAAGAAGTCAGAAATCAATGGTGTCTCCTCCTCTACCTCCACCACCTTCCCCTCCAGGGGCTACCAAGAGCTCTTTTGCCACCCCTCCTCCTCCTACTTCCTCTTCCCTGAAAAGCTCATTTTCAACCCCTCCTCTGTCACCTTCAGCCCAATCACAAACCTTTTCATTTCCTGGAAAATCTCCATACTCTGTTGTCAAAGATTCAATTATAACCCAGCCTCCCCCTCCCccacctccacctccacctccacctcAAACTTCAACTGAGCAGaccttattttcaaaatctccTTCCCCTCCTCCATCTGAGAGCATGAACAACTCTGCTATTATCTCTGGCCCACCTCCACCCCCAAGACATTCTGGAATCACATCTGGTCCTGTTTCATCATCAGTGCCACCACCACCCGCTCCTCCAAATTCTGCATCCAGAAATTCTGTGTCCAAGAATTGCACTACTGTTCCACCTGTGCCTCCTCCTCCTTCCCCATATCCTAATTTGTTACCAAAATCCGGTACTTCTCCTCTGCAATCCCCTCCCAATGTTGGTAATGGAAATGTACCACCTCCAGTTCCAGGACCACCTTCTGGTGTTCCATTTGGTGCAAAGGGACGCGGCCCATTACGAGCTAATCCAAAAGGTCAGACTCAAACTAAAAGGAGTAACTTGAAGCCTTACCATTGGTTAAAGCTAACGAGGGTGGTGCAAGGCAGCTTATGGGCTGAGACACAGAAACTGGACGATGCTTCTAAGGCTCCAGAGTTTGACATGTCAGAACTTGAGAGTCTTTTCTCTGCAGTTGCTCCAAATTCTGATCATGGAAGAAAAGGAGGCGAATCTAATCGTCATGCCTCAAGGCCAAAAGCTGACAAAGTTCAACTGATTGAGCTCAGACGGGCATATAATTGCGAGATCATGctttcaaaagtcaaaatccCCATGCCAGATCTAATGAGCTCTGTGCTTGCGTTGGATGATTCTGCATTAGATGTTGATCAGATTGAGAACCTCATAAAGTTCTGTCCAACCAAAGAAGAGATGGAATTGCTCAAGGGCTATAATGGAGACAAGGACAATTTGGGGAAGTGTGAACAGTTCTTCTTAGAATTGATGAAAGTGCCGAGAGTCGAATTGAAGCTAagagttttctcttttaaaatacaattctGCTCCCAGgtTTCTGAGCTTAGAAGGGACTTAAATATTGTCAATTCTGCTTCTGAAGAGATAAGGAATTCAGTCAAATTGAAAAGGATCATGCAGACCATTCTTTCTCTGGGTAACGCTTTGAACCATGGGACTGCAAGAGGTTCTGCTGTTGGATTTCGATTGGATAGTCTCCTTAAACTCACTGATACACGAGCGCGGAACAACAAGATGACTCTCATGCATTATCTTTGCAAGAACAGTGCCACTGATTTTATGCCTTATTGGATGAAGTCATTGAATTGCCTACTCCAAGTGCTTGCTGAAAAGCTTCCAGAACTTCTAGATTTCCCTAAAGACCTTGTGTCTTTGGAGGCTTCAACCAAGatacaattgaaatatttagcAGAGGAAATGCAAGCTATCAGCAAAGGACTGGAGAAAGTAGTTCAGGAATTGACTGCATCAGAGAATGATGGACCTGTGTCAGAAAATTTCTGCAAGATTTTAAAGGAATTCCTTTGTGATGCTGAAGCTGAAGTGAGGTCTTTGGCTCAACTTTATTCTATTGTGGGTAGAAATGCAGATGCGTTGACTCTATACTTTGGAGAAGATCCTGCACGTTGCCCCTTTGAGCAAGTTGTATCGACTCTGCACAACTTTGTGAAGATGTTCGTACGAGCACATGAAGAAAATTGCAAGCAGCTTGAATTCGAAAGAAAGAGAGCAGAGAAGGAAGCGGAACAAGAAAAGTTGAAGCTAGCTGCTAAAATGGAGTGTGAACAAATGGTACGGACCCCCGTCAAGAGTGGCAGAATTAAATG 4505 0.4047 MSLFWKFFLKKPPDGLLEISERVYVFDYCFTMDVLEESKYKEYVGGIIKQLHDHFPDASFMVFNFREGDNESQIASILCEYDMNVVDYPRQYEGCPLLTTEMIHHYLRSGESWLQLGQQNVLLMHCERSGWPVLAFMLAALLIYRKQYTGEQKTLDMIYKQANPELLQLMSPLNPLPSQLRYLQYISRRNVGPQWPPLDRALTLDCVIIRFIPNMDEEGGCRPIFRIYGPDPFMAADRTSKLLFSTPKRSKLVRHYKQADCELAKIDIHCHVQGDVVLECINLGDDLEREQMIFRVMFNTAFIRSNILMLNRDEIDILWNIANDQFPKDFRVEVLFSDMDASSVISIDLPCIEDKEGLPAEAFAKVQEIFSNVDWLGTKTEVANVLQQIKVSNILLERLDSGFSATTSSLLKESLSGKFTFEPKRLLENDIKNLASNVQGNPSDSSFESSVETPLEKKIEPLELKTLSENNIRNPASIGLGKQCVPLVGLSVASNILSEKLDSGVSDATSNSPKESLSGKFELEPKRPPRIDIKNLASNFQGIPSVSSFQSSFDISPNQKIETTIGKASSESNIKSPASIGPGKHSVSSIGLLTNSDSNKMKIEALESWEAIMDQGKQSTPLIEPAMDGNLIKKKTEPLESTTMSENDIKSPTSSPQLKQSVPSFQPAIDANSIKKKIEPQELRVVLQLPAQSKIISPRVHQASRSAPVPYCTSLQGSTVPISRYQSAPSVLGITALLQDHVVTDTKEEVTHTIAEPTPSTVSPSVSKVPRSIEPSSSCIPPALLPSFSLKSSLDASTAVEKTFRSIALTTAATPPPRCPPQLHQPTPNLMQSVAVQHQEITMHERSQKSMVSPPLPPPPSPPGATKSSFATPPPPTSSSLKSSFSTPPLSPSAQSQTFSFPGKSPYSVVKDSIITQPPPPPPPPPPPPQTSTEQTLFSKSPSPPPSESMNNSAIISGPPPPPRHSGITSGPVSSSVPPPPAPPNSASRNSVSKNCTTVPPVPPPPSPYPNLLPKSGTSPLQSPPNVGNGNVPPPVPGPPSGVPFGAKGRGPLRANPKGQTQTKRSNLKPYHWLKLTRVVQGSLWAETQKLDDASKAPEFDMSELESLFSAVAPNSDHGRKGGESNRHASRPKADKVQLIELRRAYNCEIMLSKVKIPMPDLMSSVLALDDSALDVDQIENLIKFCPTKEEMELLKGYNGDKDNLGKCEQFFLELMKVPRVELKLRVFSFKIQFCSQVSELRRDLNIVNSASEEIRNSVKLKRIMQTILSLGNALNHGTARGSAVGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLDFPKDLVSLEASTKIQLKYLAEEMQAISKGLEKVVQELTASENDGPVSENFCKILKEFLCDAEAEVRSLAQLYSIVGRNADALTLYFGEDPARCPFEQVVSTLHNFVKMFVRAHEENCKQLEFERKRAEKEAEQEKLKLAAKMECEQMVRTPVKSGRIK 1482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00442 1482 ProSiteProfiles C2 tensin-type domain profile. 199 339 IPR014020 -
Bva10g00442 1482 Pfam Formin Homology 2 Domain 1060 1433 IPR015425 -
Bva10g00442 1482 MobiDBLite consensus disorder prediction 503 517 - -
Bva10g00442 1482 MobiDBLite consensus disorder prediction 1027 1042 - -
Bva10g00442 1482 MobiDBLite consensus disorder prediction 871 904 - -
Bva10g00442 1482 Pfam C2 domain of PTEN tumour-suppressor protein 200 337 IPR014020 -
Bva10g00442 1482 MobiDBLite consensus disorder prediction 843 1066 - -
Bva10g00442 1482 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1135 1459 - -
Bva10g00442 1482 Coils Coil 1434 1461 - -
Bva10g00442 1482 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1058 1459 IPR015425 -
Bva10g00442 1482 MobiDBLite consensus disorder prediction 933 955 - -
Bva10g00442 1482 MobiDBLite consensus disorder prediction 998 1013 - -
Bva10g00442 1482 MobiDBLite consensus disorder prediction 852 870 - -
Bva10g00442 1482 Gene3D Protein tyrosine phosphatase superfamily 14 190 IPR029021 -
Bva10g00442 1482 Gene3D Formin, FH2 domain 1077 1471 IPR042201 -
Bva10g00442 1482 SMART PTEN_C2_2 197 338 IPR014020 -
Bva10g00442 1482 SMART it6_source 1057 1480 IPR015425 -
Bva10g00442 1482 MobiDBLite consensus disorder prediction 1112 1134 - -
Bva10g00442 1482 MobiDBLite consensus disorder prediction 915 932 - -
Bva10g00442 1482 MobiDBLite consensus disorder prediction 503 525 - -
Bva10g00442 1482 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 339 IPR035892 -
Bva10g00442 1482 MobiDBLite consensus disorder prediction 642 661 - -
Bva10g00442 1482 Gene3D - 196 342 - -
Bva10g00442 1482 PANTHER FORMIN-J 1 1473 - -
Bva10g00442 1482 MobiDBLite consensus disorder prediction 636 661 - -
Bva10g00442 1482 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Bva10g00442 1482 MobiDBLite consensus disorder prediction 1120 1134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00442 Bva-Chr10 4578063 4586757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00442 602 741 FH2 protein (formin) Gene Family AT2G25050 39.456 1.94e-14 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00442 - - var:108338170 1558.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00442 10 4578063 4586757 Bva10g00442 10 4578063 4586757 ECH