Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00440 ATGGCGGAATCAGCGTGCCTTGATACTTCTTTGAATCTAAATCTCAGTCCGTCTCGCCACATGGATGTTGCGGCAGAGATGTTGGTGGAAGAGTTGCATCGATTGAGTAGTGAGAACAAGAAACTAAGTGAGAGGCTGAGCCGCATGTGCGAGAGCTACAATGCTTTGCAGAATCATTTGAGGGAATTGGTATTAGTGGacgagaggaagagaaaggcaGCTCCGCATCATCACGAGAGTGTGTTTGGCATCAGGAATGAGTGCAGTATTAGCGAGGAACCGTGCAAGAAGCCCTGCAGGGAAATCACCACAACACCAAAGgtttctaaatattttgtacGAACCCAACAATCTGACAACAGCTTATATGTGAAGGATGGATATCAGTGGAGGAAATATGGTCAAAAGGTTACCAGAGATAACCCATCTCCTAGGGCTTACTTTAGGTGCTCCTTTGCCCCAGGCTGCCCGGTCAAAAAGAAGGTGCAGAGAAGCGTACAGGACCCAAGAGTGTTGGTAGCAACTTACGAAGGAGAGCACAACCACTCGCCAAGAGCCGAAGCCGCCGCTGTTTCGTCATCTTCGCTCTCACCCTTACCCATAGCTATGGATAGAACTGCTGGCCTCCCCACTCTAACGCTTGACCTAGTCCACCCATCATCTGCAGGATTACTTCATCAGAATGCCCAAAACACCATTAACCACTTGTTGGTTCAAAAAATGGCTTCTTCTTTGACAAGAGATCCCAATTTCACGGCAGCACTTGCCACTGCCATTTTGGACCAcactactta 794 0.4572 MAESACLDTSLNLNLSPSRHMDVAAEMLVEELHRLSSENKKLSERLSRMCESYNALQNHLRELVLVDERKRKAAPHHHESVFGIRNECSISEEPCKKPCREITTTPKVSKYFVRTQQSDNSLYVKDGYQWRKYGQKVTRDNPSPRAYFRCSFAPGCPVKKKVQRSVQDPRVLVATYEGEHNHSPRAEAAAVSSSSLSPLPIAMDRTAGLPTLTLDLVHPSSAGLLHQNAQNTINHLLVQKMASSLTRDPNFTAALATAILDHTT 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00440 264 SUPERFAMILY WRKY DNA-binding domain 120 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva10g00440 264 SMART WRKY_cls 124 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva10g00440 264 Coils Coil 25 45 - -
Bva10g00440 264 ProSiteProfiles WRKY domain profile. 119 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva10g00440 264 PANTHER WRKY TRANSCRIPTION FACTOR 40-RELATED 23 262 - -
Bva10g00440 264 Gene3D WRKY domain 108 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva10g00440 264 Pfam WRKY DNA -binding domain 125 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva10g00440 264 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 23 262 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00440 Bva-Chr10 4570927 4572345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00440 4 259 WRKY Transcription Factor Family AT1G80840 45.172 1.84e-71 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva10g00440 WRKY 3.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00440 - - gmx:100127373 253.447