Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00439 ATGGAGGTGGAGAAGAACAGTCTGTTCGGCAAATATGAAATGGGTAGGCTTCTGGGGAAAGGGACTTTCGCCAAAGTCTACCATGGCAAACACATAGCCAGTGGCGAGAGTGTTGCAATCAAAGTGATAAGCAAAGAGCAAGTGAGGAGAGAGGGGATGATGGAGCAGATCAAGCGCGAGATATCGGTGATGCGCTTGGTTCGACACCCAAACATAGTGGAACTCAAAGAAGTGATGGCCACCAAGACCAAGATTTTCTTCGTAATGGAGTACGTCCGAGGCGGCGAGCTGTTCGCCAAGGTTGCAAAAGGCAAGCTCAAAGAAGATATGGCTCGCAAATACTTCCAACAGTTAATTAGCGCCGTTGATTTCTGTCACAGCAGGGGTGTCTCCCACCGCGATCTCAAGCCTGAAAATTTGTTGCTGGATGAGAGTGAGAACCTCAAAATCTCAGATTTCGGTCTATCAGCTTTGCCAGAACAGCTCCGCAACGATGGGCTTCTCCATACCCAGTGCGGGACCCCTGCATATGTGGCCCCGGAAGTGTTGAGGAGAAAGGGGTACGATGGATCCAAAACTGATATTTGGTCCTGTGGTGTGATCTTATATGTTTTGCTTGCtggttttcttcctttccagGAGGAGAATCTTATGTGTATGTATAATAAGGTTTTCAAAGCAGATTTCCAATATCCGCCCTGGTTTTCTGCTGAATCGAGGAGATTGATTTCCAAAATCCTCGTGGCCGACCCGGATAGGAGAATCACTATTCCTGCTATAATGCGGGTCCCTTGGTTTCGTAGAGGTTTCTCGAGCCCGCCGGCGTTTCATTTACAACAACCCGTTTCGGACAGGGACGCCGATGCAGAAACGGAAATTTCCAAAACCAAGGTGTCGTTGCCCAAGTTTTTCAATGCCTTCGAGTTCATTTCGTCAATGTCTTCTGGGTTCGACTTGTCTGGGTTGTTCGAGAACACGAGGAAAACAGGGTCAGTGTTTACGTCCAAGTGTTCAGCTACGACAATTCTGTCCAAGATTGAGAAGGTAGCAAAGGGGCTGAGTTTCAAGTTAGCGACGGCGAAGGACTTCAAAATTGGGTTGCAAGGGCCCTCGGAGGGGAGAAAGGGGGGGTTGTTCGTGACGGCGGAGGTGTTCGAGGTGGCACCGGAGGTCGCCATCGTTGAGTTTTCAAAGACTTCCGGCGACACTTTGGAATACGCCAAGTTTTGCGAGGAAGATGTTAGGCCTGCACTGAAAGACATTGTCTGGACGTGGCAAGGTGACAACATCTGCAACGGGTA 1301 0.4865 MEVEKNSLFGKYEMGRLLGKGTFAKVYHGKHIASGESVAIKVISKEQVRREGMMEQIKREISVMRLVRHPNIVELKEVMATKTKIFFVMEYVRGGELFAKVAKGKLKEDMARKYFQQLISAVDFCHSRGVSHRDLKPENLLLDESENLKISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRRKGYDGSKTDIWSCGVILYVLLAGFLPFQEENLMCMYNKVFKADFQYPPWFSAESRRLISKILVADPDRRITIPAIMRVPWFRRGFSSPPAFHLQQPVSDRDADAETEISKTKVSLPKFFNAFEFISSMSSGFDLSGLFENTRKTGSVFTSKCSATTILSKIEKVAKGLSFKLATAKDFKIGLQGPSEGRKGGLFVTAEVFEVAPEVAIVEFSKTSGDTLEYAKFCEEDVRPALKDIVWTWQGDNICNG 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00439 433 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Bva10g00439 433 Pfam NAF domain 301 356 IPR004041 GO:0007165
Bva10g00439 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Bva10g00439 433 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00439 433 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00439 433 Gene3D Transferase(Phosphotransferase) domain 1 92 271 - -
Bva10g00439 433 CDD CIPK_C 305 419 - -
Bva10g00439 433 SUPERFAMILY Protein kinase-like (PK-like) 9 298 IPR011009 -
Bva10g00439 433 Gene3D Kinase associated domain 1, KA1 299 424 - -
Bva10g00439 433 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 25-RELATED 4 432 - -
Bva10g00439 433 Gene3D Phosphorylase Kinase; domain 1 2 91 - -
Bva10g00439 433 CDD STKc_SnRK3 11 265 - -
Bva10g00439 433 PANTHER - 4 432 - -
Bva10g00439 433 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00439 433 ProSiteProfiles NAF domain profile. 299 324 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00439 Bva-Chr10 4564635 4566501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00439 1 429 CBL-interacting serine-threonine protein kinases AT5G10930 70.682 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bva10g00439 Pkinase 3.2e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00439 - - tcc:18587713 717.227