Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00434 ATGGCAAAGTGTCACCGGAAGGACGTCGGATCTCTGGTTCTTGGCCATCGCGATCCTACTAGAAATGCAACCGTTGGCGGCCACTTCCGGCTTTGGAACACCTTCTCCGCTTCCTCATTTCGCCGCATCATTTTTGACGCCGTTAGCTGTGGTGGTAGCTCTCGTTATCACCACCGTAATCGCGATGACTTTAGCTGCTCCTTCTCAACGACGAGATCAGACTCTGGTAACTTGAAGGAAAAACAGAGACAGGGAGATTCCAAGTCTCGTACAAAACCGAATGCGAGGTCCGAGAAGTTATCGGATCTTCTGAATATTGCAGAATCTGAAACTGACgccgaaacgaagaagaaggaagatgaATTGGAGGAGCTGAAGCGAATCGTGAAGGAGTTGCAGGGAGAGGATTTGATGAAGCAGCAAATGGCTGCGTCCAATGTGAGATTGCTCGCCAAGGAAGACTTGAAAATCAGAGGGACACTGGCAATGCTCGGAGCAATTCCTCCTTTAGTTGGAATGCTTGATTTGGAAGACGTTCAATCTCAGATCGCTTCGCTCTATGCGTTACTCAATCTAGGGATCGGCAACGATGCAAACAAAGCAGCCATTGTCAAAGTTGGCGCTGTTCATAAGATGCTAAAGTTGATTGACTCCCCTGTGGCACCAGATTCCTCAGTCTCTGATGCAATTGTTGCAAATTTCCTTTGTTTGAGTGCTTTGGATTCCAACAAACCAGTAATTGGATCCTCCGGTGCAGTACCTTTCCTTGTTAAAACCcttgaaaatttagaaaataaaactagcCCCCAAGCTAAGCAAGACTCTCTCCGAGCGCTGTACAATCTTTCAATCTTCCCAAACaatatttcattcattttggaAACGGATTTGGTTCCATTTCTGATAAACACATTAGGAGACATGGAAGTCAGTGAAAGAATCCTCTCAATCCTAAGCAATTTGGTGTATACTCCACAGGGTCGAAAAGCCATTAGTGCTGTGACAGATGCAATTCCAATTGTGGTTGATGTATTGAATTGGACGGACTCACCAGGATGCCAAGAAAAGGCATCATACATTTTGATGATTATGGCACATAAAGCCTACGGTGACAGGCAGGCCATGATTGAGGCAGGGATTGTGTCATCACTGCTTGAGTTGACGCTTCTGGGTACCACATTGACACAGAAAAGGGCCTCAAGACTATTGGAATGTTTAAGGGTAGATAAGGGGAAGCAGGTTTCGGGGAGTTACGGTAGAAACTTAGGTGCAACTGTGTCTGCTCCTATTTGTGGCTCTTCATCGTCATCATGTCCAGAGCCAAATGGAGGTGGAAAAGAGTGTTTGGAGTTGGAGGAAGACATGATGAGTGAGGAGAAGAAGGCAGTGAAGCAATTAGTCCAGCAGAGTTTGCAAAACAACATGAGGAAAATTGTGAAAAGGGCTCATTTGCCTCAAGATTTTGTTCCATCAGAGCATTTCAAGTCATTCACTTCAAGTTCGACTTCCAAGAGCTTGCCTTTTTG 1526 0.4384 MAKCHRKDVGSLVLGHRDPTRNATVGGHFRLWNTFSASSFRRIIFDAVSCGGSSRYHHRNRDDFSCSFSTTRSDSGNLKEKQRQGDSKSRTKPNARSEKLSDLLNIAESETDAETKKKEDELEELKRIVKELQGEDLMKQQMAASNVRLLAKEDLKIRGTLAMLGAIPPLVGMLDLEDVQSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIDSPVAPDSSVSDAIVANFLCLSALDSNKPVIGSSGAVPFLVKTLENLENKTSPQAKQDSLRALYNLSIFPNNISFILETDLVPFLINTLGDMEVSERILSILSNLVYTPQGRKAISAVTDAIPIVVDVLNWTDSPGCQEKASYILMIMAHKAYGDRQAMIEAGIVSSLLELTLLGTTLTQKRASRLLECLRVDKGKQVSGSYGRNLGATVSAPICGSSSSSCPEPNGGGKECLELEEDMMSEEKKAVKQLVQQSLQNNMRKIVKRAHLPQDFVPSEHFKSFTSSSTSKSLPF 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00434 508 Coils Coil 449 469 - -
Bva10g00434 508 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 508 - -
Bva10g00434 508 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 508 - -
Bva10g00434 508 Gene3D - 121 407 IPR011989 -
Bva10g00434 508 SUPERFAMILY ARM repeat 124 407 IPR016024 -
Bva10g00434 508 SMART arm_5 196 239 IPR000225 GO:0005515
Bva10g00434 508 SMART arm_5 285 323 IPR000225 GO:0005515
Bva10g00434 508 SMART arm_5 154 194 IPR000225 GO:0005515
Bva10g00434 508 SMART arm_5 240 284 IPR000225 GO:0005515
Bva10g00434 508 MobiDBLite consensus disorder prediction 76 101 - -
Bva10g00434 508 Coils Coil 115 135 - -
Bva10g00434 508 MobiDBLite consensus disorder prediction 66 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00434 Bva-Chr10 4525127 4527841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00434 114 420 U-box Gene Family AT2G23140 31.715 1.09e-31 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00434 - - zju:107422474 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00434 10 4525127 4527841 Bva06g02341 06 15132413 15135651 BWGD