Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00431 ATGACAGTGGAGACTGGAAGGGATGATCCCAGAGACCAATTTCCTGTAGGAATGCGTGTTCTTGCCGTTGACGATGATCCTACTTGTCTGTTAGTGCTGGAAACTCTGCTTCGAAGATGTCAATATCACGTAACCACAACTAGTCAGGCAACAACTGCATTGAAGATGTTGAGGGAAAACAGAGATAAGTTTGACCTTGTCATCAGTGATGTCCATATGCCAGATATGGATGGATTTAAGCTGCTTGAGCTCGTGGGACTTGAGATGGATCTCCCTGTCATAATGTTGTCTGCAAATGGTGATCCCAAGCTGGTGATGAAGGGAATAACTCATGGAGCTTGTGATTATCTGCTGAAACCTGTTCGAATTGAGGAGCTAAAGAACATTTGGCAGCATGTAATCCGGAGGAAGAAGTTTGACAGAAAGGATGGGAACAAAGGCGGCAACCAAGATAAAGCTCATTCTGGTAGCAGCAATGGACTAGGGTCAGCAGGTATTGGAAATTCAGATCAAAATGGAAAGCTCACCAAAAAAAGGAAGGATcaggatgaagaagaagatgaggaaAATGAGGATGGCCCTGAAAATGACGACCCCTCAACCCAGAAGAAGCCTAGAGTTGTCTGGTCTGTGGAGCTGCACCGCAAGTTTGTTGCTGCTGTTAATCAGTTAGGAATTGATAAGGCTGTaccaaagaaaattcttgattTGATGAATGTCGAGAAGCTTACTAGGGAGAATGTAGCAAGCCATCTCCAGAAGTATAGGCTTTATCTGAAGAGAATTAGCTGTGTGGCAAACCAACAGGCTAATATGGTGGCAGCTTTAGGTAGTGCAGATCCATCCTATTTGAGAATGAGTTCTCTGAGTGGCCTTGGACATTTACAAACACTGAATGGTTCTGGGCAGTTTCAGAACAATGTTTTCAAATCCTTCCCACCTAGTGGGATGATTGGTAGATTGAACACTCCTGCTGGTCTTGGTGTGCATGGATTGCCTTCTTCTGGAATTCTTCCGTTGGGTCATCATGgccaaaatttaaacaattccATGAATAATCCACTCAATTTTCCGTCAACCATAGTTGGTGGTAACCAGAATGCTAGTGCAATTCAGGGTGTGCCAGTGTCTATGGGGCTTGATCAATTACGACAAAATAAGGCCATTACTACTGTTGAAGACCTGGCTACTGATATTGATGATAAAACAATTTTGACCATCACAAATAAACTAACAGATCCAAAAGCGCGCGCACCACTTATGGGTGTCACAAACAACTCATTCATGTTAGAAACACAAGGGAGTAGAGGATATGAGAATCTATCTTCAGTAGCCTCTCAACATTCAGAATTCTCTTTGTCTTCACTTGATCATGGCAGGTGTAGTGATAATTGGTCAACAGCAGTGCAGTCATCTGGGATCCACCCAAATTCTTCTTACCCATCCACTCAGCGTTTTAGACAGGCTGCTTTATCTCTTACAGATAACATGCCTTCTACACGCATGCATGTGTCAAATCCAAGTGCTGCTTCATCTGTCACTTCTCTCTCCGCTCAATCCCATGATTCAATAACAGATATGCACTCCAAAGGAACCGTTTTTACTAATTCACCTGCGCAAGTAAGCAATAATGCCCCTTTTCAAGGCTGGGACGACCATAATCAGGACTTCAATTTCCACTCAATGAACTCTCTCATTCCTGCAAATGGTGCTGTTGATCCCTCGGGGCATGCTACAATAAACTCTGCTTTCCACAGGAACTTGGAATTTAACGTTGGTGACCTTTTACAGATGAAGCATGATGAGGTGGCCAAATCAGCTAAAAAGACCCTGTTAAAACCGAATCATGGGTATATCATGGACCAACAGAAGGCACAACACAGTCGCATCTCTAATAACCTTGGTTCATTGGAAGACTTGGTCAGTACAATGATGAAACAGGAACGGAATAAGGTGAAGTTAATGGAAGGAGAGTTCGTATGCGATAGTTACTCTGGTGGGGCATCTATGTG 2012 0.4225 MTVETGRDDPRDQFPVGMRVLAVDDDPTCLLVLETLLRRCQYHVTTTSQATTALKMLRENRDKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKFDRKDGNKGGNQDKAHSGSSNGLGSAGIGNSDQNGKLTKKRKDQDEEEDEENEDGPENDDPSTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSADPSYLRMSSLSGLGHLQTLNGSGQFQNNVFKSFPPSGMIGRLNTPAGLGVHGLPSSGILPLGHHGQNLNNSMNNPLNFPSTIVGGNQNASAIQGVPVSMGLDQLRQNKAITTVEDLATDIDDKTILTITNKLTDPKARAPLMGVTNNSFMLETQGSRGYENLSSVASQHSEFSLSSLDHGRCSDNWSTAVQSSGIHPNSSYPSTQRFRQAALSLTDNMPSTRMHVSNPSAASSVTSLSAQSHDSITDMHSKGTVFTNSPAQVSNNAPFQGWDDHNQDFNFHSMNSLIPANGAVDPSGHATINSAFHRNLEFNVGDLLQMKHDEVAKSAKKTLLKPNHGYIMDQQKAQHSRISNNLGSLEDLVSTMMKQERNKVKLMEGEFVCDSYSGGASM 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00431 670 MobiDBLite consensus disorder prediction 150 172 - -
Bva10g00431 670 Pfam Response regulator receiver domain 20 128 IPR001789 GO:0000160
Bva10g00431 670 MobiDBLite consensus disorder prediction 140 203 - -
Bva10g00431 670 CDD REC_typeB_ARR-like 20 134 - -
Bva10g00431 670 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 645 IPR045279 GO:0009736
Bva10g00431 670 PIRSF RR_ARR_type-B 1 668 IPR017053 GO:0003677|GO:0003700|GO:0009736
Bva10g00431 670 Pfam Myb-like DNA-binding domain 206 256 IPR001005 -
Bva10g00431 670 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 201 260 IPR017930 -
Bva10g00431 670 Gene3D - 17 154 - -
Bva10g00431 670 SMART REC_2 18 130 IPR001789 GO:0000160
Bva10g00431 670 ProSiteProfiles Response regulatory domain profile. 19 134 IPR001789 GO:0000160
Bva10g00431 670 SUPERFAMILY CheY-like 17 140 IPR011006 -
Bva10g00431 670 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 204 257 IPR006447 GO:0003677
Bva10g00431 670 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR10 1 645 - -
Bva10g00431 670 Gene3D - 200 263 - -
Bva10g00431 670 SUPERFAMILY Homeodomain-like 201 261 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00431 Bva-Chr10 4505708 4510169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00431 1 670 Response Regulator Gene Family AT2G25180 44.331 1.20e-142 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Bva10g00431 Response_reg 1.1e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00431 - K14491 gmx:100809002 844.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00431 10 4505708 4510169 Bva06g02346 06 15168374 15173509 BWGD