Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00429 ATGGAAACACTGAGTAACGAGCCATATCTGTGTGATAACCCCAGCATCTTCTCTGTTCCAGAGGCTCCTCCTAGTCCAAGTACACCGTTGCAGAATGCACAGGAAGAGAAGCAGCAGCAATCTGTTGAGGAAgacgaagaagaaaaagaggcaAAGTTAGAGACTTCACTGGATCTGAATGTTGCTGGTGATTATTCTGCTATTAGGTGCAATACAGAGCTTAATCTCTTCAAATGTTCTGATATGGGTTCACCTAAAAGTTCATCAGAAAACCCTTTTGGTTCTGAAACTGAACCACCAAGAGTTTTCTCTTGCAACTACTGCCAGAGAAAGTTCTACAGTTCACAAGCGCTCGGAGGACACCAAAATGCCCATAAGAGGGAGAGATCAATAGCAAAAAGAGGACAAAGATTAGGAGCACAGGTAATGGCTTCCGCAGCAGCTTTTGGTCACCCTTTTCTGCATAATCACCGTTATACAAGCATGGCTTCTCTACCTCTGCACGGTGCTTGTAATAGACCTCTTGGAATTCAAGCACACTCTTTGATCCAGAAGCCTTCTCACATATCGATCGGAAGCACTTATGGACACCATGGCTGGTCAAGACCACTCATTGGTCAACAACCTGGAATAGGGAAACTAGCAATGGAAAATTTTCACAGAACAGCATCAAGAGGCAGTGTAGGTAGATTTGACACGGTAAAAACGATGATGAGTTCTGCAGCCACAGAAGAAATCACTGAATATTTGGTAGCTGGAACTCGTTTGAAGAAGAATCATGAAGAGATGAAGCAGCAGCTTGATTTGTCCCTCAAGCTCTG 821 0.4287 METLSNEPYLCDNPSIFSVPEAPPSPSTPLQNAQEEKQQQSVEEDEEEKEAKLETSLDLNVAGDYSAIRCNTELNLFKCSDMGSPKSSSENPFGSETEPPRVFSCNYCQRKFYSSQALGGHQNAHKRERSIAKRGQRLGAQVMASAAAFGHPFLHNHRYTSMASLPLHGACNRPLGIQAHSLIQKPSHISIGSTYGHHGWSRPLIGQQPGIGKLAMENFHRTASRGSVGRFDTVKTMMSSAATEEITEYLVAGTRLKKNHEEMKQQLDLSLKL 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00429 273 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 273 - -
Bva10g00429 273 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 1 273 IPR044246 GO:0009788
Bva10g00429 273 Coils Coil 30 52 - -
Bva10g00429 273 ProSiteProfiles Zinc finger C2H2 type domain profile. 103 130 IPR013087 -
Bva10g00429 273 ProSitePatterns Zinc finger C2H2 type domain signature. 105 125 IPR013087 -
Bva10g00429 273 Gene3D Classic Zinc Finger 89 150 - -
Bva10g00429 273 SUPERFAMILY beta-beta-alpha zinc fingers 101 130 IPR036236 -
Bva10g00429 273 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00429 Bva-Chr10 4498057 4499121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00429 1 273 C2H2 Transcription Factor Family AT5G10970 42.955 3.77e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva10g00429 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00429 - - gmx:100819663 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00429 10 4498057 4499121 Bva06g02348 06 15181041 15182137 BWGD