Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00421 ATgataattcttcttcttctgcttcttgTTATTCTTCGTGAACCCATTTGGGTTTTTGCAACGCCTGGCCGTCTTCTTTCCTCGCCTCTACCCTCGCCCATTTCTCCAATCTCCTCAGCACTGACTGCTTTGCCCTCGGGTATTCATGCGGGGAATGAAGAACACCGAATGaattcaaataagaaaatgctAATAGAGCTCGTCGGAGCTGGCACTTCACTTGTTGCTGTCATTTTGTGTCTTTTATGCTTGTGGATTCATTATAGGAAGCTTCCatccaaatccaaaagaaaaagttgtaaAAACTCGGATGCTGAGAAAGGGGTGGCGTTAGCTCCATTTTTGAGTAAATTCAATTCCATAAGGCTGGTTGGCATGAAGGGGTCTGTtccaataattgaatataagcAAATAGAAAATTCGACAAACAATTTCCGGGAGAGTAACATCTTGGGTCAGGGTGGATTTGGACGTGTTTACAAGGCTCGCTTGGAAGATAATTTTGATGTTGCAGTTAAGAAACTACACTGTCAAACTCAGAATGCCGAGAGAGAATTtgagAATGAGGTGGATTTGCTGAGTAAAATTCAGCACACAAATGTAATTTCTTTACTGGGTTGCAGCATTAATGGCGACACCAAGTTTATTGTCTGTGAACTAATGCAAAATGGATGCCTGGAAACTCAATTACATGGGCCTTCTCATGGGTCGGCACTAACTTGGCATAGAAGATTGAAGATTGCTCTTGATACAGCAAGAGGATTAGAATATCTACACGAGCACTGTCGCCCTCCGGTGATCCATGGAGATCTGAAATCATCTAATATTCTTTTAGATGCAGACTTCAATGCCAAGCTTTCTGATTTTGGTCTCGCCGTAGCTGATGGGTCCCAGAACAAGAATAACATGAAGCTCTCAGGCACATTGGGTTATGTAGCCCCGGAATATCTTTTAGATGGTAAATTGACTGATAAAAGTGATGTCTATGCTTATGGAATTGTGCTTCTTGAGCTTCTATTAGGAAGAAGGCCTGTGGAAAAAACGTCACCAGCTCAGTGCCAATCCATTGTCACATGGGCCATGCCACAGCTCACTGACCGATCCAAGCTACCAAACATTGTGGATCCCGTGATTAAGAATACAATGGATCTGAAGCATTTGTACCAGGTTGCTGCAGTAGCTGTGCTATGCGTGCAACCAGAACCGAGTTACCGGCCACTGATCACAGACGTTCTCCACTCGCTCATCCCTCTTGTTCCTATTGAGCTCGGAGGAACCTTGACAATTTCACAAGTTAAAGAACGTGTCCATCCTGCTCACTCACCACTATCTCCCACTCCCAGTCACTA 1349 0.4159 MIILLLLLLVILREPIWVFATPGRLLSSPLPSPISPISSALTALPSGIHAGNEEHRMNSNKKMLIELVGAGTSLVAVILCLLCLWIHYRKLPSKSKRKSCKNSDAEKGVALAPFLSKFNSIRLVGMKGSVPIIEYKQIENSTNNFRESNILGQGGFGRVYKARLEDNFDVAVKKLHCQTQNAEREFENEVDLLSKIQHTNVISLLGCSINGDTKFIVCELMQNGCLETQLHGPSHGSALTWHRRLKIALDTARGLEYLHEHCRPPVIHGDLKSSNILLDADFNAKLSDFGLAVADGSQNKNNMKLSGTLGYVAPEYLLDGKLTDKSDVYAYGIVLLELLLGRRPVEKTSPAQCQSIVTWAMPQLTDRSKLPNIVDPVIKNTMDLKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLIPLVPIELGGTLTISQVKERVHPAHSPLSPTPSH 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00421 449 Pfam Protein tyrosine and serine/threonine kinase 148 382 IPR001245 GO:0004672|GO:0006468
Bva10g00421 449 PANTHER OS01G0750732 PROTEIN 32 436 - -
Bva10g00421 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Bva10g00421 449 ProSiteProfiles Protein kinase domain profile. 145 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00421 449 SUPERFAMILY Protein kinase-like (PK-like) 123 415 IPR011009 -
Bva10g00421 449 PANTHER BNAA04G14780D PROTEIN 32 436 - -
Bva10g00421 449 CDD STKc_IRAK 151 418 - -
Bva10g00421 449 SMART serkin_6 145 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00421 449 Gene3D Phosphorylase Kinase; domain 1 111 220 - -
Bva10g00421 449 ProSitePatterns Protein kinases ATP-binding region signature. 151 174 IPR017441 GO:0005524
Bva10g00421 449 Gene3D Transferase(Phosphotransferase) domain 1 221 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00421 Bva-Chr10 4464275 4467355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00421 15 361 Receptor kinase-like Gene Family AT1G80640 47.411 1.22e-96 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Bva10g00421 PK_Tyr_Ser-Thr 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00421 - - gmx:100812044 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00421 10 4464275 4467355 Bva06g02354 06 15207591 15211139 BWGD