Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00404 ATGGGGAAGCCCACTGGGAAGAAGAAGGATGTTGTTGTCCAGAAGGCTACAAATGCAAACGTCAAGCCAAGCAAGCCTTCTGAAAGGACCTCCAAAGCTTTTGATGAAGACACAGCAATGTTCATCAACATGTCACAAGAGCTCAAGGAAGAAGGTAACAGACTATTCCAGAAGAAGGATCATGAAGGCGCTATGTTGAAGTATGAGAAGGCCCTCAAGCTCCTTCCCAGTAACCATATTGATGTCGCCCACCTACGGAGTAATATGGCATCCTGTTATATGCAATTGGGTCTGGGGGAATACCCTCGAGCAATTAACGAATGCAATTTAGCATTGGAAGTATCACCCAGATATAGTAAAGCTCTGTTGAAAAGGGCAAAGTGCTATGAAGCATTGAATCGGTTGGATTTGGCACTGAGAGATATTAAAACTGTTTTGAGTGTGGAGCCTAGTAATCTTACTGCATTGGAGATGCTGGACAGTGTGAAGAAgatgatggaagaaaaaggTATCACTGTTGATGATAAAGAGATTGGCTTAGCTAGTGTTGAGAGCTCTGCTGCTTCTCGTTTGCGAAAAGCGGTCAAAgagaaattaaggaaaaagaaaaataaaaaaattgacgaTAAGGCAGAGGATAAGGTCGTTGTTCAAGAGAATGCGAATGCTGTTAAGGATAAAGAAGTGGTTCCAACAACAACTGAGGAAGAAAAACTTATAGTTGAACCcgttaaagaagaaaaagtggtCACAAGGACTGTGAAGTTGGTACTTGGAGAGGATATAAGGTGGGCACAGTTACCAGTGAATTGTAGTGTGAAGTTGGTAAGGGATATTGTAAGGGATCGGTTTCCAGGATTGAAGGGTGTTCTTGTGAAGTACAGGGATCAGGAAGGTGATTTGGTTACAATCACAACTACTGATGAACTAAGGCTAGCTGAATCTTCAGGTCTCCTTCAGGGCCCCCTTGGTTCACTTCGATTCTATATTACGGAAGTCAATCCAGACCAGGAACCACCATATGATGAAATAACCAATGACGATGAGGTGCAAATTGATGGTGGAAAAGAAATTGCTATTACTGAGAATGGGGTTATGGAAGAAGGCAACAATGTTGTTGCAAATAGGATGACTAGTGCGGAGGACTGGATTATCCAGTTTGCAAGGATGTTCAAGAACCATGTTGGGTTTGATTCTGATGTATATTTGGATCTTCATGAACTTGGAATGAAACTATATTCGGAAGCAATGGAGGATACAGTAACTAATGATGACGCTCAAGAACTTTTTGAAATTGCTGCCGATAAATTTCAAGAGATGGCAGCTTTGGCAGTATTTAATTGGGGGAATGTTCACATGTCCAGGGCAAGGAAGCGGGTTTCTGTTCCAGAAGATGGGTCAAGGGAATATGCTTTTGAGCATATTAAAGTTGCTTATGATTGGGCGCAAAAGGAGTACATAAAAGCAGAAATGAGATACGGAGAAGCCTTGAAAATCAAACCAGACTTATACGAGGGGTTTCTTGCTCTTGGGCATCAGCAGTTTGAGCAAGCAAAGCTCTGCTGGTATTATGCAATAGCATGTAAGATGGATTTAGAAGCTGGCCCTTCTGATGAGGTTCTACAGCTCTACAACAAGGCGGAGGACAACATGGAGAAAGGCATGTTGATGTGGGAGGAGATGGAGGAGCAACGTTTAAATGGACTATCAAAAGCAGATAAGTTTAAAGCTCATTTAGAGAAAATGGGTTTGGATAGTCTTATCAAAGATGTCTCTTCTGATGAAGCTGCAGAGCAGGCTGCAAACATGAGGTCacaaatatatcttttatggGGTTCCTTATTGTATGAGCGTTCTGTTGTTGAATACACGCTAGGCCTACCAACATGGGAAGAATGTTTGGAGGTGTCAGTCGAGAAGTTTGAACTTGCTGGAGCTTCTCCAACAGATATAGCTGTCATGATAAAGaatcattgctccaatcaaGCAGCAGTAGAAGGTTTGGGGTTCAAAATTGATGAGATTATTCAAGCATGGAACGACATGTACGATGCCCACAGGTGGCAGTTTGGTGTTCCTTCTTTCCGACTTGAACCATTGTTTCGTCGGCGTTGCGTCTGTTTTGTTGGTTTTATAGGGATTTTTTCTCCATACTGCATTGGTTTAGCTCATGAATTGGAGCTGGGtggattttcatttcttctttgtCTGTG 2213 0.4031 MGKPTGKKKDVVVQKATNANVKPSKPSERTSKAFDEDTAMFINMSQELKEEGNRLFQKKDHEGAMLKYEKALKLLPSNHIDVAHLRSNMASCYMQLGLGEYPRAINECNLALEVSPRYSKALLKRAKCYEALNRLDLALRDIKTVLSVEPSNLTALEMLDSVKKMMEEKGITVDDKEIGLASVESSAASRLRKAVKEKLRKKKNKKIDDKAEDKVVVQENANAVKDKEVVPTTTEEEKLIVEPVKEEKVVTRTVKLVLGEDIRWAQLPVNCSVKLVRDIVRDRFPGLKGVLVKYRDQEGDLVTITTTDELRLAESSGLLQGPLGSLRFYITEVNPDQEPPYDEITNDDEVQIDGGKEIAITENGVMEEGNNVVANRMTSAEDWIIQFARMFKNHVGFDSDVYLDLHELGMKLYSEAMEDTVTNDDAQELFEIAADKFQEMAALAVFNWGNVHMSRARKRVSVPEDGSREYAFEHIKVAYDWAQKEYIKAEMRYGEALKIKPDLYEGFLALGHQQFEQAKLCWYYAIACKMDLEAGPSDEVLQLYNKAEDNMEKGMLMWEEMEEQRLNGLSKADKFKAHLEKMGLDSLIKDVSSDEAAEQAANMRSQIYLLWGSLLYERSVVEYTLGLPTWEECLEVSVEKFELAGASPTDIAVMIKNHCSNQAAVEGLGFKIDEIIQAWNDMYDAHRWQFGVPSFRLEPLFRRRCVCFVGFIGIFSPYCIGLAHELELGGFSFLLCL 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00404 737 PANTHER PROTEIN PHOX4 1 705 - -
Bva10g00404 737 ProSiteProfiles TPR repeat profile. 45 78 IPR019734 GO:0005515
Bva10g00404 737 SMART PB1_new 251 333 IPR000270 GO:0005515
Bva10g00404 737 MobiDBLite consensus disorder prediction 1 33 - -
Bva10g00404 737 SUPERFAMILY TPR-like 35 167 IPR011990 GO:0005515
Bva10g00404 737 Gene3D - 244 332 - -
Bva10g00404 737 Pfam PB1 domain 251 316 IPR000270 GO:0005515
Bva10g00404 737 ProSiteProfiles TPR repeat profile. 119 152 IPR019734 GO:0005515
Bva10g00404 737 SMART tpr_5 83 118 IPR019734 GO:0005515
Bva10g00404 737 SMART tpr_5 45 78 IPR019734 GO:0005515
Bva10g00404 737 SMART tpr_5 119 152 IPR019734 GO:0005515
Bva10g00404 737 PANTHER PROTEIN CLMP1 1 705 IPR044517 -
Bva10g00404 737 SUPERFAMILY CAD & PB1 domains 250 343 - -
Bva10g00404 737 CDD PB1 253 313 - -
Bva10g00404 737 Gene3D Tetratricopeptide repeat domain 36 174 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00404 Bva-Chr10 4371501 4375874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00404 28 152 Calmodulin-binding Proteins AT3G25230 29.104 3.26e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00404 - - jre:109002799 1018.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00404 10 4371501 4375874 Bva06g02369 06 15283920 15288475 BWGD