Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00383 ATGGAGCTTCACTTAAGTCTGGCTCTTCCAACCTGCAATCCAGTTGAGGGATGCGACCAAAAAAACCATGTCTTGGCGTTAAAACAGAAGGCGGGTTCAGAATTATGGGCACCGAGTTGTCGTTTGGAAagcaaaaaacattttaaaaacaagCGTAGCTTTCAAGATTCTTTTGGACAGTCTTTGACTGTGTCTTCGGACTCTTTACTGGTATGGAGCGGACAACcaaatgaagaagatgaacgcaatggaaagaaaaacagGAACACTGACATAGCAAACAAGAATgacaatgaaaaaaatcaaGTGGTGGGTTGGCCACCCATTAAAGAATGGAGGAAGAAGATACTCCATCTCCCTCAGCATCATGGAGGCCAGATCAGAAATGATAGAGGGCCAGCAGAAAATAAAGGCAGAGGATCAAACTCCTTATACGTCAAAGTGAAGATGGAGGGAGTAGCAATAGGAAGGAAGATCGATTTAAGACTCTATAACTCGTATAGGACTCTGACAAGCACGTTGGTTAGCATGTTTGCCAACTACCAAAAACTTAAGGAAGAAGGAACAAGTTATACACTTACCTATCAAGACGAAGAAGGGGATTGGCTACTTGCTGGGGATGTTCCGTGGCAATCCTTCATTGATTCCGTGCAGCGTTTGGAGATATTAAGGAATGGCAATGAAACTACTTG 692 0.3945 MELHLSLALPTCNPVEGCDQKNHVLALKQKAGSELWAPSCRLESKKHFKNKRSFQDSFGQSLTVSSDSLLVWSGQPNEEDERNGKKNRNTDIANKNDNEKNQVVGWPPIKEWRKKILHLPQHHGGQIRNDRGPAENKGRGSNSLYVKVKMEGVAIGRKIDLRLYNSYRTLTSTLVSMFANYQKLKEEGTSYTLTYQDEEGDWLLAGDVPWQSFIDSVQRLEILRNGNETT 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00383 230 MobiDBLite consensus disorder prediction 73 102 - -
Bva10g00383 230 Gene3D - 138 230 - -
Bva10g00383 230 ProSiteProfiles PB1 domain profile. 143 230 IPR000270 GO:0005515
Bva10g00383 230 PANTHER AUXIN-RESPONSIVE PROTEIN IAA29 1 226 - -
Bva10g00383 230 SUPERFAMILY CAD & PB1 domains 140 222 - -
Bva10g00383 230 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 1 226 IPR003311 GO:0005634|GO:0006355
Bva10g00383 230 Pfam AUX/IAA family 187 227 IPR033389 -
Bva10g00383 230 Pfam AUX/IAA family 5 182 IPR033389 -
Bva10g00383 230 MobiDBLite consensus disorder prediction 78 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00383 Bva-Chr10 4277435 4278879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00383 132 222 B3 DNA Binding Superfamily AT2G46530 36.264 7.89e-12 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bva10g00383 AUX_IAA 5.9e-43 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00383 10 4277435 4278879 Bva10g00383 10 4277435 4278879 ECH