Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00378 ATGGAGGTGGAACCTTGCTCTTTCTTCCATGTGATTGTCTTCCTGGGGTTGTCTGTTCTCCTTTTGTCCGAAATCTGTTTGGCTGGTATTCAAACTGTTGGCAGTATCAAACCAGGGTTTCAAGGTTCTCAAATGACATGGATTGACAAAGATAACGggttgtttcttttgtcaaaaaGCCGAGAATTTGCCTTCGGCTTTAAGACCACAGAGGACATAACTTTGTTTCTACTAGTAATCATCCACATGGGAAGCAACAGAGTGGTTTGGACTGCAAATAGAGCACAAGCTGTTAGTAATTCTGATAAATTTGTGTTTGATGAAAACGGTAATGCCCTTTTACGGAAAGGGGAAACCGTGGTTTGGTCCACCAACACAGGCGGCAAAGGAGTTTCTTTAATGAAATTGCAGGACACAGGAAACTTGGTTTTTCTCACAAACGATAGCAGAATAGTTTGGCAGAGTTTCAGCCATCCAGCAGATACCTTGTTACCAGGGCAGAACTTCACAGAGGGAATGAAACTTATCAGTGAACCTAGCTCCAATTACAACTTGACCTATTTTCTTGAGATCAAATCTGGTGATGTTATCCTTTCTGCTGATTTCCAAACACCACAACCTTATTGGTCTGTCAAGAAGGAAAATCGTAAAACCATCAACAAAGATGGTGATGTGGTTTCTTCAGCATCTTTGAGTGCAAATTCTTGGAGGTTCTATGATCAAAACAAAGCCTTCTTGTTGCAATTCATTTTTGCCCAAGATTCAGATGTAAATGCCACTTGGATTGCAGTTCTTGGTAGTGATAGCTTTATCACTTTCTACAATCTTCAAAGTGGAGGGTCAAATGGTGcttcaacaacaaaaatacCACAAGATTTTTGCAGCACGCCTGAACCTTGTGATTCATATAACATATGCAGTGGTAATAACAGGTGCCGCTGCCCTTCGGTCCTCAGCTCTCATCAAAATTGCAAACCAGGTATCGTTTCTCCTTGTAGTGAATCAGAACTTCCCATGGAGCTTTTAAAAGCTGATGATATCTCCAATTACTTTGCACTTGGATTCATCCAACCCTCTTCAAAAACTGATTTAAATGGTTGCAAAAATTCTTGCCTTGGAAACTGCACATGCCTTGCTATGTTTTTCCACAACAGTTCAGGGAACTGTTTCCTGTTGGACAAAGTAGGAAGTTTCCAGAACTCTGATACAGATTCTGGTTTTGTATCTTACATTAAGGTCTCCAGTGCCGGAGGCACAGGCATTGGGGGCGGTGGAAGCAGCACTAAACACACCATAGTGGTTGTGGTGATTGTCATTTCAACGTTGTTTGTTATTTCTTGTCTGCTCTGTTTGGGACTTAAATATCACAGGAAGAAGCAAAAAGGGCATGAGTCTCCTCAACAGAGTTCAGAAGAGGACAATTTCTTGGAGAATTTAACTGGAATGCCAATCCGTTTCAGCTACAAAGATTTGGAAACTGCAACTAATAACTTTTCGGTGAAGCTTGGGCACGGGGGTTTTGGCTCAGTTTATAAAGGAGTTCTACCAGATGGAACTCAACTAGCTGTGAAGAAGTTGGAAAGCATTGGCCAAGGGAAAAAAGAGTTCAGGGCTGAAGTTAGCATCATTGGCAgcattcatcatcttcatttgGTCAGGCTTAAAGGTTTTTGTGCTGAAGGATCCCATCGGCTTCTTGCTTATGAGTTTATGGCAAATGGATCATTGGATAAATGGAtattcaagaagaaagaagagttcTTGTTGGATTGGGATACAAGGTTTAATATAGCTCTGGGAACAGCAAAAGGATTGGCTTACCTACACGAAGACTGTGATTCAAAGATTGTTCATTGTGATATCAAACCTGAAAATGTACTTCTTGATGATCATTTTCATGCCAAAGTTTCAGACTTTGGATTGGCTAAGCTCATGAATCGTGAACAAAGCCATGTCTTTACAACACTAAGGGGCACCAGAGGGTATCTTGCACCAGAGTGGATCACAAACTATGCCATATCAGAGAAAAGTGATGTTTATAGTTATGGAATGGTATTGCTAGAGATAATCGGAGGAAGGAAAAATTATGATGCTACTCAATCTTCAGAGAAATCCCACTTCCCAACTTATGCTTTTAAGATGATGAATGAAGGGAAACTCGAGGATATTCTGGATTCAAAGCTGATAATAGACGAACACGACGAAAGGATTCAAACTTCTATTAAAGTTGCATTGTGGTGCATACAGGAAGATATGTCTTTGAGGCCTTCTATGACCAAGGTTGTCCAGATGCTCGAGGGTCTTTGCACTGTTCCTAAGCCACCAACTAGTTCTCCCTTGGGTTCTCGCCTATTCTCAACTTTCTTCAATTCCAACAGCGGGGAGGGCACTTCTTCAGGCCCATCAGACTATAACAGCGATGCTTATCTTTCTGCAGTTCGTCTTTCAGGACCAAGATA 2459 0.4022 MEVEPCSFFHVIVFLGLSVLLLSEICLAGIQTVGSIKPGFQGSQMTWIDKDNGLFLLSKSREFAFGFKTTEDITLFLLVIIHMGSNRVVWTANRAQAVSNSDKFVFDENGNALLRKGETVVWSTNTGGKGVSLMKLQDTGNLVFLTNDSRIVWQSFSHPADTLLPGQNFTEGMKLISEPSSNYNLTYFLEIKSGDVILSADFQTPQPYWSVKKENRKTINKDGDVVSSASLSANSWRFYDQNKAFLLQFIFAQDSDVNATWIAVLGSDSFITFYNLQSGGSNGASTTKIPQDFCSTPEPCDSYNICSGNNRCRCPSVLSSHQNCKPGIVSPCSESELPMELLKADDISNYFALGFIQPSSKTDLNGCKNSCLGNCTCLAMFFHNSSGNCFLLDKVGSFQNSDTDSGFVSYIKVSSAGGTGIGGGGSSTKHTIVVVVIVISTLFVISCLLCLGLKYHRKKQKGHESPQQSSEEDNFLENLTGMPIRFSYKDLETATNNFSVKLGHGGFGSVYKGVLPDGTQLAVKKLESIGQGKKEFRAEVSIIGSIHHLHLVRLKGFCAEGSHRLLAYEFMANGSLDKWIFKKKEEFLLDWDTRFNIALGTAKGLAYLHEDCDSKIVHCDIKPENVLLDDHFHAKVSDFGLAKLMNREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDATQSSEKSHFPTYAFKMMNEGKLEDILDSKLIIDEHDERIQTSIKVALWCIQEDMSLRPSMTKVVQMLEGLCTVPKPPTSSPLGSRLFSTFFNSNSGEGTSSGPSDYNSDAYLSAVRLSGPR 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00378 819 Pfam Protein kinase domain 500 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00378 819 CDD B_lectin 52 159 IPR001480 -
Bva10g00378 819 SMART serkin_6 496 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00378 819 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 6 819 - -
Bva10g00378 819 SUPERFAMILY Protein kinase-like (PK-like) 476 766 IPR011009 -
Bva10g00378 819 ProSiteProfiles Bulb-type lectin domain profile. 41 157 IPR001480 -
Bva10g00378 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 87 182 IPR036426 -
Bva10g00378 819 CDD STKc_IRAK 502 768 - -
Bva10g00378 819 Gene3D Transferase(Phosphotransferase) domain 1 571 773 - -
Bva10g00378 819 SMART blect_4 39 159 IPR001480 -
Bva10g00378 819 ProSiteProfiles PAN/Apple domain profile. 332 415 IPR003609 -
Bva10g00378 819 Pfam D-mannose binding lectin 88 170 IPR001480 -
Bva10g00378 819 CDD PAN_AP_plant 332 413 - -
Bva10g00378 819 ProSitePatterns Protein kinases ATP-binding region signature. 502 525 IPR017441 GO:0005524
Bva10g00378 819 Gene3D - 49 158 IPR036426 -
Bva10g00378 819 ProSiteProfiles Protein kinase domain profile. 496 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00378 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Bva10g00378 819 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 6 819 - -
Bva10g00378 819 Gene3D Phosphorylase Kinase; domain 1 457 570 - -
Bva10g00378 819 PIRSF SRK 7 815 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00378 Bva-Chr10 4245985 4249567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00378 439 777 Receptor kinase-like Gene Family AT5G20050 44.011 2.06e-97 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bva10g00378 Pkinase 5.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00378 - - cit:102623355 1197.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00378 10 4245985 4249567 Bva06g02393 06 15394056 15397306 BWGD