Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00374 ATGACGACATTGCTACATGGGACCCTTCAAGTGACCATATATCAAATAGATAGGCTACATCATGGATTCAACTTTGATTGCTTTCAACAGgGTACAAGAAACCGGGGGAAGAAAGCTCTGGCCCAACTCAAGAATTGTATCTTGTGCCGATGCCAGCCTGAGATTGTTGGGATTGGGCGGTCACTGTATGCAACGGTTGATTTAGATAAAGCAAGGGTTGGGCGAACgagaaaagtagaaaatgaACCCAAGTGGGACGAGACCTTTCACATATACTGTGCTCATCAGATCTCACATATTATATTCACTGTCAAAGAAGATGATCCTATTGGAGCAACACTAATTGGAAGAGCTTACGTGCCAGTTGAGGAAGTCATGAGGGGCTACATGGTGGAGACGTGGGTTAGGATATTAGATGAAGAGAATAATCCTATACCAGGTGGCTCTAAAATCCATGTCAAGATGCAATTCTTCCATGTTAGCAATGACGAACACTGGTCTCAAGGAATAAGAAGTCCACGTTTTGCTGGAGTCCCTCGTGTATTTTTCCCTCAAAAGAATGGTTGCAAAGTTACTTTGTATCAAGATGCCCATGTCCAAGATGGTTCTCTGCCTTATTTCTCACTCTCCGGAAGAAAATCTTATGAGCCTGCTAGATGCTGGGAGGATATCTTCAAAGCCATTATGGATGCTAAGCATTTCATTTACATAACTGGCTGGTCTGTTTACACTGAAATAACCTTAATTAGAGATCCAAGAAGGTATATTCCTGGGGGAAACATGGCCCTGGGGAATCTGCTCAAGTTGAAAGCAGATCAAGGAGTCAAAGTTCTTATGCTTGTTTGGGATGACAGAACTTCTTCTGAACAACTGAAAAATGATGGCATGATGACAACCCATGATCAGGAAACTGAAGAATACTTTCGTAACACAAATGTACATTGTGTTCTGTGCCCTCGTAATCCTGATGGTGGAAGAAGCATGGTTCAAGGCGTTGAGATTTCAACAATGGCCACTCACCACCAAAAGACACTAGTTGTTGACAGTGAAGTAGCCGGTGGAGGATCCAAACGGAGGATAGTAAGTTTTGTTGGTGGTATTGATCTCTGTGATGGGAGATATGACATCCAAGAACATCCTTTATTTGCAACTCTAAATTCAATGCATTCTCAAGATTTTCATCAGCCAAACTTCCCGGGCGCTTCAATTAAGAAAGGCGGTCCAAGGGAGCCTTGGCATGATATTCATTGCAGGCTAGAAGGTCCAGTGGCTGGGGATGTCTTGGACAATTTTGAGCAAAGATGGAAGAAGCAAGTTGGGACGGAATACCTACTCACAGAAAgccagaaaaatgaaattctagtCCCTTCATCTTATATTACAGCTTCAAATGATCAAGAGAGTTGGACTGTTCAGTTGTTCAGGTCTATAGACGGTGGTGCCGCTTATGGCTTCCCTGAAGACCCAGATGAAGCAGCTGAAAAGGGTCTTGTCAGTGGGAAAGATAACATCATTGACAGAAGCATTCAGGATGCCTACATCAATGCTATTCGTCGAgcaaaaaatttcatctacATCGAAAATCAGTATTTCCTAGGGAGTTCATATGGTTGGCATGCATCTGATATCAAAGTTGAGGATATTGGAGCTTTGCACCTCATACCGAAGGAGCTGTCTTTGAAGATTGTTAGCAAGATTGAAGCGGGAGAGATATTCTCTGCCTACATTGTGATCCCTATGTGGCCAGAAGGCATACCTGAAAGTGATTCAGTTCAAGCAATATTAGATTGGCAAAGGAGGACCATGGAGATGATGTATTCTGACATTGCAGCAGCCATTCAAAAGAAGGGAATTAATGCCCACCCAAGGGATTATTTGACATTCTTCTGCCTTGGAAACAGAGAGGGCAGGAATTATGAAGAATATCCTCCTCCAGAGAGACCAGAACCTGACAGTGATTATAGCAGAGCACAGAAAGCTAGGCGCTTCATGATATATGTTCATGCAAAGATGATGATAGTTGATGATGAATACATAATCATTGGTTCTGCCAACATCAACCAGAGATCAATGGATGGTGGAAGGGACACTGAGATTGCAATGGGTGCATTCCAACCATATCACCTAACAGCTTATGGTTCAGCTAAAGGTCAGATATATGGGTTCCGGCGAGCATTATGGTATGAGCATCTTGGGGATCTTCCTGGTCAAGTCTTGGACAATCCAGAAAGTGAGGAATGCATCAAACTTGTGAATCGTCATGCTGAGAGGAATTGGGAAATATACTCAAGGGAAAGATTTGATCAAGGTAGGCAGTTTCACCACCTCATGCGCTACCCAGTAGAAGTAACAAAGAATGGAGCAGTAACAACACTGCCAGGGTTTGAACATTTTCCAGACACCAAGGCTCCTATTTTGGGCTCCAAACGCGATTACCTCCTTCCCATTCTCACCACCTA 2459 0.4242 MTTLLHGTLQVTIYQIDRLHHGFNFDCFQQGTRNRGKKALAQLKNCILCRCQPEIVGIGRSLYATVDLDKARVGRTRKVENEPKWDETFHIYCAHQISHIIFTVKEDDPIGATLIGRAYVPVEEVMRGYMVETWVRILDEENNPIPGGSKIHVKMQFFHVSNDEHWSQGIRSPRFAGVPRVFFPQKNGCKVTLYQDAHVQDGSLPYFSLSGRKSYEPARCWEDIFKAIMDAKHFIYITGWSVYTEITLIRDPRRYIPGGNMALGNLLKLKADQGVKVLMLVWDDRTSSEQLKNDGMMTTHDQETEEYFRNTNVHCVLCPRNPDGGRSMVQGVEISTMATHHQKTLVVDSEVAGGGSKRRIVSFVGGIDLCDGRYDIQEHPLFATLNSMHSQDFHQPNFPGASIKKGGPREPWHDIHCRLEGPVAGDVLDNFEQRWKKQVGTEYLLTESQKNEILVPSSYITASNDQESWTVQLFRSIDGGAAYGFPEDPDEAAEKGLVSGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSYGWHASDIKVEDIGALHLIPKELSLKIVSKIEAGEIFSAYIVIPMWPEGIPESDSVQAILDWQRRTMEMMYSDIAAAIQKKGINAHPRDYLTFFCLGNREGRNYEEYPPPERPEPDSDYSRAQKARRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGGRDTEIAMGAFQPYHLTAYGSAKGQIYGFRRALWYEHLGDLPGQVLDNPESEECIKLVNRHAERNWEIYSRERFDQGRQFHHLMRYPVEVTKNGAVTTLPGFEHFPDTKAPILGSKRDYLLPILTT 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00374 819 Pfam C2 domain 8 136 IPR000008 -
Bva10g00374 819 Gene3D C2 domain 6 170 IPR035892 -
Bva10g00374 819 ProSiteProfiles C2 domain profile. 1 135 IPR000008 -
Bva10g00374 819 SMART pld_4 336 373 IPR001736 GO:0003824
Bva10g00374 819 SMART pld_4 663 690 IPR001736 GO:0003824
Bva10g00374 819 SUPERFAMILY Phospholipase D/nuclease 496 736 - -
Bva10g00374 819 Gene3D Endonuclease Chain A 209 465 - -
Bva10g00374 819 Pfam Phospholipase D Active site motif 336 373 IPR001736 GO:0003824
Bva10g00374 819 Pfam Phospholipase D Active site motif 664 690 IPR001736 GO:0003824
Bva10g00374 819 CDD C2_plant_PLD 1 158 - -
Bva10g00374 819 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 663 690 IPR001736 GO:0003824
Bva10g00374 819 PANTHER PHOSPHOLIPASE D ALPHA 3 3 819 - -
Bva10g00374 819 PIRSF PLD_plant 1 819 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bva10g00374 819 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 336 373 IPR001736 GO:0003824
Bva10g00374 819 SUPERFAMILY Phospholipase D/nuclease 165 445 - -
Bva10g00374 819 Pfam Phospholipase D C terminal 738 809 IPR024632 -
Bva10g00374 819 PANTHER PHOSPHOLIPASE D 3 819 IPR015679 -
Bva10g00374 819 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 160 IPR035892 -
Bva10g00374 819 SMART C2_3c 8 134 IPR000008 -
Bva10g00374 819 Gene3D Endonuclease Chain A 479 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00374 Bva-Chr10 4221362 4224756 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00374 4 819 Phospholipase D Gene Family (Wang group) AT3G15730 63.956 0.0 1078
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00374 K01115 - gmx:100791688 1211.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00374 10 4221362 4224756 Bva10g00374 10 4221362 4224756 ECH