Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00373 ATGCAACTGCTACACGGAACGCTTGAGGCAACCATATATCAAGTGGACAAGCTACACACTGGATGCAACTTTGATTTTTGCGGAAAGGGCACAAAACATAGAGGGAAGAAATTTCTTGCCCAAGTCAAGGGATGTGTACTCTGCCGGCCAGAGATTGTTGGGACGAGACTCTATGCAACAGTTGATTTAGACAAGGCACGGGTTGGACGAACCAGAATGGTACGCAATGAAGCTCACAGCCCCAAGTGGAACGAGCGCTTTCACATTTACTGTGCCCATAGCATCTCAAACATTATATTCACTGTCAAAGATGATAATCCCATTGGAGCAACTCTGATAGGCAGAGCTTACGTACCTGTTGAGCAAGTCATCAAGGGCTCAACATTTGAAAGATGGCTTGAGATACTAGATGAAGATTCTCATCCTATACGCGGTGGCTCTAGAATCTATGTTAAAATATGTTTCGTCAATGTCACTGGTGATGGCTTCAGTCCCTGGTCTAAAGGAATAAGCAGTCAAGAGTTTCTAGGAGTTCCTCGCACATTTTTCAATCAAAGGCGTGGCTGCAAAGTTACTTTATACCAAGATGCCCATCTCACAAATGATTTCCTCCCTTTTATTCCCCTCTCTGGAGGAAAAGACTATAAGCCTAGTAGGTGCTGGGAGGACATTTTCACCACCATTATGAATGCTAAGCATTTCATTTACATAACTGGCTGGTCTGTTTACACTCAAATAACCTTAACTAGGGACCAATGGAGGCCAATTCCTGATGAAAACATCACCCTTGGGGAGCTGCTCAAGAAGAAAGCTGATGAAGGAGTGAAAGTTCTTATGCTTCTTTGGAATGACAGAACTTCTGTCGTGGAACTGAAGAAATCTGGTTTGATGGAAACCCATGATGAGGAGAATGCAGATTACTTTAGGAACACAAAAGTCCAGTGTGTTCTGTGTCCCCGTAATCCTGATGACGGTAAGAGCATCGTTCAAGgctttcaaatttcaacaatGTTTTCTCACCACCAGAAGACACTAGTTGTTGACAGTGAAGTACCCGGTGTTGAAGAATCCCACAAGCGAAGGGTCATAAGTTTTGTTGGTGGTATCGATCTCTGTGATGGAAGATATGATACGCAAGAACATCCTTTGTTTTCAACTTTGGGAACAATCCACCGTGATGATTTCCATCAGCCAAACTTTACAGGTGCTTCAATCAAGAAAGGTGGTCCAAGGGAGCCGTGGCATGATATTCACTGTCAACTTGAAGGACCAGTGGCTTGGGATGTCTTGTACAATTTTGAGCAGAGGTGGGAGAAGCAAGTTGGAAAGCAACACCTATTTCCCTTTAGCGCGCTTGACGAAATCCTGGTCCCTCCATCTGATGTAACAACAACAGAAGATGAAGAGACCTGGACTGTTCAGTTATTTAGATCCATTGATGGTGGTGCGGTTTCTGGATTCCCTCAATCGCCAGAGGAAGCTGCTGAATATGGCCTTGTTAGTGGGAAAGATAACGTCATCGACAGAAGTATTCAGGATGCATACATAAATGCTATTCGGCGAgcaaaaaatttcatctacATTGAAAATCAATACTTTATAGGGAGTTCATATGGCTGGCGTGCATCTGATATCGTAGTCGAGGATATTGGAGCTTTGCACCTTATACCAAAGGAGCTGTCATTGAAGATTGTTAGTAAAATTGAAGCAGGAGAGAGATTTTCCGTCTACATTGTGATCCCAATGTGGCCAGAAGGCTTACCTGAAAGTGCTTCAGTTCAACCAATATTAGATTGGCAGAGGAGGACCATGGAGATGATGTATTGTGACATTGCAGCagccattaaaaagaaaggaattgaTGCCCATCCGAGGGATTATTTAACATTCTTCTGCCTTGGAAACAGGGAGGGTAAGAAAGATGGAGAATATGCTCCTCCAGAGACACCAGAGCCTGACAGTGATTACAGTAGAGCACAAAAATCTAGGCGCTTCATGATATACGTTCATTCTAAGATGATGATAGTTGATGATGAATACATAATCATTGGTTCTGCCAACATTAACCAGAGATCAATGGATGGTTCAAGGGACACTGAGATTGCAATGGGTGCATTCCAACCACGCCATCTGACAGCTAATGGAGAAGCCAGAGGTCAAATATATGGGTTTCGACGAGCATTATGGTATGAGCATTTTGGGGATCCAGTAAACAATGCAGTCTTGCAATATCCAGAAAGTGAGGAGTGCATCAAACTTGTGAATCTTCTTGCCCAGAATAACTGGGAAATATACTCCAATGAAACATTTGATGAAGGTAGATCAGTTCACCATCTCTTGCGTTACCCAGTAGAAGTAAACGATGATGGAACCATATCAACACTGCAAGGGTTTGAATGTTTTCCTGACACCAAGGCTCCTATTCTGGGCTCCAAATCTGATTATCTTCCCTCAGTCCTCACCACCTA 2468 0.425 MQLLHGTLEATIYQVDKLHTGCNFDFCGKGTKHRGKKFLAQVKGCVLCRPEIVGTRLYATVDLDKARVGRTRMVRNEAHSPKWNERFHIYCAHSISNIIFTVKDDNPIGATLIGRAYVPVEQVIKGSTFERWLEILDEDSHPIRGGSRIYVKICFVNVTGDGFSPWSKGISSQEFLGVPRTFFNQRRGCKVTLYQDAHLTNDFLPFIPLSGGKDYKPSRCWEDIFTTIMNAKHFIYITGWSVYTQITLTRDQWRPIPDENITLGELLKKKADEGVKVLMLLWNDRTSVVELKKSGLMETHDEENADYFRNTKVQCVLCPRNPDDGKSIVQGFQISTMFSHHQKTLVVDSEVPGVEESHKRRVISFVGGIDLCDGRYDTQEHPLFSTLGTIHRDDFHQPNFTGASIKKGGPREPWHDIHCQLEGPVAWDVLYNFEQRWEKQVGKQHLFPFSALDEILVPPSDVTTTEDEETWTVQLFRSIDGGAVSGFPQSPEEAAEYGLVSGKDNVIDRSIQDAYINAIRRAKNFIYIENQYFIGSSYGWRASDIVVEDIGALHLIPKELSLKIVSKIEAGERFSVYIVIPMWPEGLPESASVQPILDWQRRTMEMMYCDIAAAIKKKGIDAHPRDYLTFFCLGNREGKKDGEYAPPETPEPDSDYSRAQKSRRFMIYVHSKMMIVDDEYIIIGSANINQRSMDGSRDTEIAMGAFQPRHLTANGEARGQIYGFRRALWYEHFGDPVNNAVLQYPESEECIKLVNLLAQNNWEIYSNETFDEGRSVHHLLRYPVEVNDDGTISTLQGFECFPDTKAPILGSKSDYLPSVLTT 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00373 822 SUPERFAMILY Phospholipase D/nuclease 498 740 - -
Bva10g00373 822 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 158 IPR035892 -
Bva10g00373 822 Pfam Phospholipase D Active site motif 336 375 IPR001736 GO:0003824
Bva10g00373 822 Pfam Phospholipase D Active site motif 666 692 IPR001736 GO:0003824
Bva10g00373 822 PANTHER PHOSPHOLIPASE D 2 822 IPR015679 -
Bva10g00373 822 Pfam Phospholipase D C terminal 741 812 IPR024632 -
Bva10g00373 822 SUPERFAMILY Phospholipase D/nuclease 177 447 - -
Bva10g00373 822 Gene3D C2 domain 3 153 IPR035892 -
Bva10g00373 822 SMART C2_3c 7 132 IPR000008 -
Bva10g00373 822 ProSiteProfiles C2 domain profile. 1 133 IPR000008 -
Bva10g00373 822 CDD C2_plant_PLD 3 156 - -
Bva10g00373 822 Pfam C2 domain 36 134 IPR000008 -
Bva10g00373 822 SMART pld_4 336 375 IPR001736 GO:0003824
Bva10g00373 822 SMART pld_4 665 692 IPR001736 GO:0003824
Bva10g00373 822 Gene3D Endonuclease Chain A 211 459 - -
Bva10g00373 822 PIRSF PLD_plant 1 822 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bva10g00373 822 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 336 375 IPR001736 GO:0003824
Bva10g00373 822 Gene3D Endonuclease Chain A 480 709 - -
Bva10g00373 822 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 665 692 IPR001736 GO:0003824
Bva10g00373 822 PANTHER PHOSPHOLIPASE D ALPHA 3 2 822 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00373 Bva-Chr10 4216394 4219760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00373 2 822 Phospholipase D Gene Family (Wang group) AT3G15730 65.371 0.0 1113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00373 K01115 - gmx:100791688 1213.36