Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00367 ATGGCTGTGGAGCTGGACACTTTCATGAATGAGTTTGATATAGATGCAAACCACATTGGCATTGATACAAGAAGATTCACAAATCCAATTGCTGCAGTGAGTCTCAATAGCACTGCTGTTGACCTGAAAGGTGGAAGAGACATTGAGGTGAAAATAAACTGCGATGTTTATGTTGGTTTCACAGCCTCCACAGGCCAAACTTTGCCAGAAAGCCATCGGGTCCTCAACTGGGTATTCACATCAGTGCCAATTCCCTTTCAAACTGTTAAGCCCACTAAACATGGTACCATTAAGACATTACTGATAATTGTCATGCCAATTTTCGTGGTGGTGTTATTTAGCTCACTTCCATTTATTTGGGAAGCTTTGAGAAAAGATAATGCGACGAATGACAAGGAAGAAGATATACAAAACACATCAATGGCAGCTGAAGATATCCCAAAGATGTTCGCTTACCAGCAACTGTCAAAGGCCACATGCAATTTCAGCAGAGAAAATCTTTTAGACAGAGGTGGATTTGGTAGTGTTTACAAAGGCATCATGTCAGATCCTCCAAAAGCCATAGCAGTAAAGAAGATTTCAGCAACTTCTAAGCAAGGTGAAAGAGAGCACTTTGCTGAAATATGTAGAGTGAAGCTGCAAGGGTGGTGCCATGATGGTGTTCATCTTCTCTTAGTCTATGATTATATGCAAAATGGAAGCCTTGATCTCTTCATAGGCAAGGACATTCTAGACTGGCAAACCAGGCATAAGATTAATATTAACAGGATTGGCATCAGCATTGCTTTACCTTCACGAAGTGTGATTGCACAAAGAAGATTCAGGAAGGCTACCCCAGAATCAGATGTTTATAGCTTTGGCATGTTGGCACTTGAAGTCATACGTGGGAGAAGATCAAAAGGGATTTCAGAAGAGAACGGTTTGGTTGACTATGTCTGGAATTTGCATTCTCAGAATGCATTGCTTGAGTGTGCTGACAAACAACTGAAAAACCAATTTGATGAGAAAGAAGTAAAAAGGGCATTGATGACTGGGCTGGCATGGCATGCTTGCGTCCAGATTCCATGTTG 1070 0.414 MAVELDTFMNEFDIDANHIGIDTRRFTNPIAAVSLNSTAVDLKGGRDIEVKINCDVYVGFTASTGQTLPESHRVLNWVFTSVPIPFQTVKPTKHGTIKTLLIIVMPIFVVVLFSSLPFIWEALRKDNATNDKEEDIQNTSMAAEDIPKMFAYQQLSKATCNFSRENLLDRGGFGSVYKGIMSDPPKAIAVKKISATSKQGEREHFAEICRVKLQGWCHDGVHLLLVYDYMQNGSLDLFIGKDILDWQTRHKININRIGISIALPSRSVIAQRRFRKATPESDVYSFGMLALEVIRGRRSKGISEENGLVDYVWNLHSQNALLECADKQLKNQFDEKEVKRALMTGLAWHACVQIPC 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00367 356 Pfam Protein tyrosine and serine/threonine kinase 165 242 IPR001245 GO:0004672|GO:0006468
Bva10g00367 356 PANTHER - 1 253 - -
Bva10g00367 356 PANTHER - 277 347 - -
Bva10g00367 356 Gene3D Phosphorylase Kinase; domain 1 147 229 - -
Bva10g00367 356 Gene3D - 1 57 - -
Bva10g00367 356 SUPERFAMILY Protein kinase-like (PK-like) 143 301 IPR011009 -
Bva10g00367 356 Gene3D - 58 90 - -
Bva10g00367 356 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IX.1-LIKE 1 253 - -
Bva10g00367 356 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IX.1-LIKE 277 347 - -
Bva10g00367 356 Gene3D Transferase(Phosphotransferase) domain 1 265 353 - -
Bva10g00367 356 SUPERFAMILY Concanavalin A-like lectins/glucanases 2 182 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00367 Bva-Chr10 4192753 4194130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00367 1 346 Receptor kinase-like Gene Family AT3G55550 27.754 4.53e-33 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Bva10g00367 PK_Tyr_Ser-Thr 3.3e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00367 - - qsu:112005183 356.681