Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00360 ATGATGATGACTCTTACTCAGTCCGTTCGGCTAAAGTCCATGGTCGTTCAGTGTGCTCATGGTGAGCGTTTCCTTCTAGGGCAGCCCACTTCTACCACTCTCACTTTGTCGCGCACACCTATATTCTGGTCCGTCCTTCATTCCTCTCCCGCTCGTAACCTGGGCTCTACTATTGCCGCCGCATCTTCATCTTccagaaggaaaaagaagaaaagttTATCTCGTAATCATGTTAAGGGGGGGActgaggaggaggaggaggatgCTTTCGAGCTACTATTTAAACAACTGGAAGAAGATCTCAAAAATGATGATTTATCCATAGATGATAGCAATGATGAGATAACTGAGGAAGACCTTGCCAGGTTTGAACAGGAGTTAGGGGATGCACTGGGGGACGTAGATACAGAAACATTAGACTCAGTCATAAATGATACTGAAACTGATAATATTGAAGAAGACGATGTTGATGAAAGACCAGTGGAGCTTAAAAATTGGCAGCTGCGGAGATTGGCTAAAGCTTTAAAAGATGGACGGCGTAAAACAAGTATCAAAAGTCTTGCTGCTGAGCTTTGTCTTGATAGAAGTATCGTTCTTGAATTACTTCGTGACCCTCCTCCAAATCTTCTAATGATGAGTCTTGCATTACCTGACAAGCCCGCCGCAACATTATCGGTGTCTGAAACCAAGCCCACAGTAGCTGTTCCTGAGGAAACGAGAGTGGATCCAGAAGGACCTGGAACGAAAGCTAAATTACCTGTTCATGTCATGCACAATAGATGGTCTGATCAAAAGAGATTGAAAAAGGCGCAAGTTGACACTCTTGAAAGAGTTTATAGAAGGACAAAGCGGCCCACTAATGCTATGATCAGCAGTATCGTGCACGTAACGAACCTTCCTCGTCGTAGAGTTGTGAAATGGTTCGAAGACAAACGCACTGAGGATGGAGTTCCAGATAAACGCCTTCCGTATCAGCGCGCTGACTCCCCGGTTCCTTA 998 0.4299 MMMTLTQSVRLKSMVVQCAHGERFLLGQPTSTTLTLSRTPIFWSVLHSSPARNLGSTIAAASSSSRRKKKKSLSRNHVKGGTEEEEEDAFELLFKQLEEDLKNDDLSIDDSNDEITEEDLARFEQELGDALGDVDTETLDSVINDTETDNIEEDDVDERPVELKNWQLRRLAKALKDGRRKTSIKSLAAELCLDRSIVLELLRDPPPNLLMMSLALPDKPAATLSVSETKPTVAVPEETRVDPEGPGTKAKLPVHVMHNRWSDQKRLKKAQVDTLERVYRRTKRPTNAMISSIVHVTNLPRRRVVKWFEDKRTEDGVPDKRLPYQRADSPVP 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00360 332 ProSiteProfiles 'Homeobox' domain profile. 258 318 IPR001356 GO:0003677
Bva10g00360 332 Pfam Homeodomain 266 313 IPR001356 GO:0003677
Bva10g00360 332 PANTHER ZINC-FINGERS AND HOMEOBOXES RELATED 59 327 - -
Bva10g00360 332 CDD homeodomain 264 312 IPR001356 GO:0003677
Bva10g00360 332 Gene3D - 260 319 - -
Bva10g00360 332 SUPERFAMILY Homeodomain-like 264 324 IPR009057 -
Bva10g00360 332 MobiDBLite consensus disorder prediction 58 85 - -
Bva10g00360 332 MobiDBLite consensus disorder prediction 310 332 - -
Bva10g00360 332 Coils Coil 94 114 - -
Bva10g00360 332 PANTHER HOMEOBOX PROTEIN 8 59 327 - -
Bva10g00360 332 MobiDBLite consensus disorder prediction 225 250 - -
Bva10g00360 332 SMART HOX_1 264 322 IPR001356 GO:0003677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Bva10g00360 Homeodomain 3.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00360 - - jre:108985138 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00360 10 4164259 4167127 Bva10g00360 10 4164259 4167127 ECH