Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00355 ATGGATTCTCTTGAAACTTTCAGAAACACCGTTAACACTACAACGTCCACATCCACAGCCACTGCCACTTCTTTATCGGAATTCCCTCCGGTTCAAGAATCCACATTTTTCCGTTCTGTAAACAATTTATCTCCAATAATACCTGCCAAAGCTTCTCATCTGGCACGGGGTTTCCTTGGACTCAATTCCCCGCCTCTTGTGTTTACATCACCACATATAAGTTCACAATGTGAAACACATTTCTTGAAAAGGCCTCAATTAtctcaatttgaaatttctcaaTGGGACACCGGAGGCAATGGTTTCATTGATGATCCTGACAATTCCAAGAAATCAGCTTTTCTCCCGCCGGTGAAGGTTATAACTGACGCTCAGAAGGATCTTTTAATCAAGAATGGTGGGAACATGCAGCATCGCAGTTCTTCACCATGTGTCAATGAATATTTAGTTGATCATGTGGATGTTGTGAAACAATCTAATGAGATAGTTGAATCATCCCAGAGTGACGTACCTTGCTCaaaggaaatcatatcaaaatttCATGGCCACAGTGACAATTATGAAGGCGTTGATGAACCATATAAATTAGAAGGTGAGAAAACAGATGTTGGATCGCTCTCTAAAGAGTGTGGAAAATCAGAGAAACAACAGTGTGATAACTCATTTGTCCAGTTAATGCAGGCTGGTCTAAGGCATCGTGGCATGCATCGACGTTGTCTTCAATATGAGGTGGCTGCGTCAAATGCTTTTGGCAACATTAACAGCTCCCCGCTTCCTGTACACACTCTAGAAGATTCAAAAGCATGGGCTGCCTTCTcagaattaaaagatttagatGTGACTTCAATCAAAAAGAAGATGGTCCAGTGTCCTGAACTTGTTAATTCCTTAATTCCTCCACAATTTAGTGGAAATTTCCCTGTGACAGGTTCCAAGCCATCAGGTATTGGGTTGCATTTGAATAGCACAGTAGATGCTATGCCACTTGGTCATGCTGCTTTTACTCATAGGCAGGACATGAAGTCGGCATCTTCAATCTGCCATAACGTGGAGAACATGTACAGATgcttaatttcatcaaatatgGATGGGCAATCTTCAGTTGGCATTGAAGATGAGAGGCGTGAAATTACTGCCTCCATAGTTTCAGTTTCTGCCACACCTGAGTCTGCTAGCACCATGGatccttcaaatttattggACTATGTTGAGCATACTGCAGGTATTCAAAATAAGAGGAAACTAAGTCCTAAAGAAGCTGGGAATGCCGAGGAAATCAATCAACCAAgccccaaaaataaaaaGACGAAAATATCAGTCACCAGCGATGGTGCTGGTTGTAAACGGTGCAACTGTAAGAAGAGTAAATGTTTAAAACTTTATTGTGATTGTTTTGCTGCCGGAATGTATTGTGATGAAACTTGTTCATGCCAAGACTGCTACAATAGACTAGAATATGAAGATACAGTTCTTGAGACAAAGCAACAAATTGAATCACGTAATCCACTTGCATTTATTCCGAAGATTGTACAGCGTGCCACTGATTTTCCATTAAATAATATGGAAGTTGATAATGTATCGACACCATCATCAGCAAGGCACAAAAGAGGTTGCAATTGCAAAAGGTCAATGTGTCtgaaaaaatattgtgaatGCTATCAGGTTAATGTCGGATGCTCAAGTGCATGTCGATGCGAAGGATGTAAGAATACCTTTGGCAAGAAAGAAGATTATATTGCAACGGAACATGCGCTCAGTAAAGGGTTGAGCGGCAGAGTTGAAAAGATATCACATAGTACATTCCACAATAAGCAGGAAATGGTGGCAAACAAGACGGATTTATTACGTGGAGAATTGTTTGATATGCACCGGCTCTCCCCTCTGACACCATCATTGCAATGCTCAGATCAAGGAAAAGAAGCAGCAAAATCTCGAGTTCTTACTGGAAAATATCTTCCATCACCCGAATGTGACGCCACTGCGTTTCCACCTCGTGCAAAATTCGCCCACTCACTGGAAAATCCAGAGCGCAGTCTTGTGCTTCTTGAAACAAATGAGACGGTGGAAACTGAGTACTGTGATTGGCAACTAGATCGTGATAACATGGAAATAATGGATCAACCACCATTGAGATGTACTTCAGTGAACAACGCAGGTCAATTCACTCCTCTGTCTAATGCTTCCTCAATGGCTAGGACTGCAACATTTCTATCTTTAAGGCAATGGGCACATCTTCCACAAGAAGTCCAACAGTTCCATGGAAATAGTAGCCTCTTATCTGGTGGTTCTCATCATTGGCGTAGTTCACCAATTACACCAACGgcaaaattaaatgagattaataaTGTAGTGTGTCCTGAATCAGCCAGCAGACTTTTTGACATTCTAGAGGATGAAACACCTGAGATCTTAAAGGAAGCATCAATTCCCATCAAGTCCGTAAAATCAAGTTCCCCAAATCAGAAGCGAGTTTCTCCTCCAGAGAGTCATGCACGTGAGCTTGAGTCAGGAGGCCTGAGGAACGGAaggaaatttataataaacgcTATGCCTTCTTTCCCACCATTGACCCCTTGCATTGATTCCAAAGGCACTAGTCATGAGAATTTGGATACCGGTACAGGAAAGTG 2630 0.3992 MDSLETFRNTVNTTTSTSTATATSLSEFPPVQESTFFRSVNNLSPIIPAKASHLARGFLGLNSPPLVFTSPHISSQCETHFLKRPQLSQFEISQWDTGGNGFIDDPDNSKKSAFLPPVKVITDAQKDLLIKNGGNMQHRSSSPCVNEYLVDHVDVVKQSNEIVESSQSDVPCSKEIISKFHGHSDNYEGVDEPYKLEGEKTDVGSLSKECGKSEKQQCDNSFVQAGLRHRGMHRRCLQYEVAASNAFGNINSSPLPVHTLEDSKAWAAFSELKDLDVTSIKKKMVQCPELVNSLIPPQFSGNFPVTGSKPSGIGLHLNSTVDAMPLGHAAFTHRQDMKSASSICHNVENMYRCLISSNMDGQSSVGIEDERREITASIVSVSATPESASTMDPSNLLDYVEHTAGIQNKRKLSPKEAGNAEEINQPSPKNKKTKISVTSDGAGCKRCNCKKSKCLKLYCDCFAAGMYCDETCSCQDCYNRLEYEDTVLETKQQIESRNPLAFIPKIVQRATDFPLNNMEVDNVSTPSSARHKRGCNCKRSMCLKKYCECYQVNVGCSSACRCEGCKNTFGKKEDYIATEHALSKGLSGRVEKISHSTFHNKQEMVANKTDLLRGELFDMHRLSPLTPSLQCSDQGKEAAKSRVLTGKYLPSPECDATAFPPRAKFAHSLENPERSLVLLETNETVETEYCDWQLDRDNMEIMDQPPLRCTSVNNAGQFTPLSNASSMARTATFLSLRQWAHLPQEVQQFHGNSSLLSGGSHHWRSSPITPTAKLNEINNVVCPESASRLFDILEDETPEILKEASIPIKSVKSSSPNQKRVSPPESHARELESGGLRNGRKFIINAMPSFPPLTPCIDSKGTSHENLDTGTGK 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00355 873 MobiDBLite consensus disorder prediction 859 873 - -
Bva10g00355 873 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 865 IPR044522 GO:0003700
Bva10g00355 873 SMART CXC_2 530 571 IPR033467 -
Bva10g00355 873 SMART CXC_2 442 483 IPR033467 -
Bva10g00355 873 MobiDBLite consensus disorder prediction 853 873 - -
Bva10g00355 873 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 4 1 865 - -
Bva10g00355 873 MobiDBLite consensus disorder prediction 1 21 - -
Bva10g00355 873 MobiDBLite consensus disorder prediction 409 435 - -
Bva10g00355 873 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 445 480 IPR005172 -
Bva10g00355 873 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 533 568 IPR005172 -
Bva10g00355 873 MobiDBLite consensus disorder prediction 807 838 - -
Bva10g00355 873 ProSiteProfiles CRC domain profile. 443 570 IPR005172 -
Bva10g00355 873 MobiDBLite consensus disorder prediction 808 822 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00355 Bva-Chr10 4136842 4141546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00355 795 855 CPP Transcription Factor Family AT4G14770 52.308 7.45e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Bva10g00355 TCR 4.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00355 K21776 - gmx:547664 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00355 10 4136842 4141546 Bva10g00355 10 4136842 4141546 ECH