LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva10g00353	ATGTCAACAAATGGGCTTCTTGATACCATCTATGAATGTCTATCCCAAGCTGTAACAGAATCCCATGAAACTCAGAAAAATGCCCTTCAAACATTGGGTTTCATCACCAAAGTAAACCCCCAGAACAGAGCCATGCTTGCTCAAATAGATGGAGCAGTTCCAACGTTGGTTGCACTCACAAATGCTCCCTCCCCGACTATCCAAACCCTGTCCTTGTTGATCCTCTTCAACCTTTCTCTCAACCCTGATCTAAAGCTCTCTCTTGCGGACACGGAAACCATTTATGTCCTCAATTCCCGGATCAGCCCACCCACATCTCCAGATTCCACCAAATTAGCCTCCTCATTGATCTGCAGTCTGGCCATACTCGATAAAAATAAGGCCAAGTTTGGGGTAGCAGGCACTGTTCAATTGCTGGTTAAGGCCATTGCAAGCTCTAGTTATGACACTGATACTGACAGTCATCACCTTTTGAGCTCTCTGGCTGAGCTTGTGCAGTTCCACGGCAACTGCACCCTGGCGGTGCGAGCCGGAGCTGTTGCAGTGCTCCTTAAAGTGGTAGAGAGCTCTGCCTCTGATAACGAGGATCTAGCTGCAACTTCTCTTACGATTCTTGGTCTCCTTGCTAGGTTTGAGGAAGGGTTAATTGCTTTGAGGAAAACTGATAACATAGTTGATTCAATGTTGAATGTGTTGAAAGGAAGGTCCTTGTCGAGCAAAGAGGGTGCAGCTGAAATCCTCATTCGCCTTTTCGATGATTGTGAAGAGAGCATTGAACAGGCACTCATGTTGCCAGACTTCTCAACCGTGCTCGCTGGCCTTTCCGTGAGGGGCTCGGTAACACTTCGAGACAAGGCTCAGTTGCTAATGAACAAGATGGCAGAGCTGAACCTCAACGTAACAGATTACGTGGATCACaaacttttgtttgttta	935	0.4652	MSTNGLLDTIYECLSQAVTESHETQKNALQTLGFITKVNPQNRAMLAQIDGAVPTLVALTNAPSPTIQTLSLLILFNLSLNPDLKLSLADTETIYVLNSRISPPTSPDSTKLASSLICSLAILDKNKAKFGVAGTVQLLVKAIASSSYDTDTDSHHLLSSLAELVQFHGNCTLAVRAGAVAVLLKVVESSASDNEDLAATSLTILGLLARFEEGLIALRKTDNIVDSMLNVLKGRSLSSKEGAAEILIRLFDDCEESIEQALMLPDFSTVLAGLSVRGSVTLRDKAQLLMNKMAELNLNVTDYVDHKLLFV	311

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva10g00353	311	PANTHER	U BOX DOMAIN-CONTAINING	1	308	-	-
	Bva10g00353	311	Gene3D	-	1	152	IPR011989	-
	Bva10g00353	311	Gene3D	-	153	264	IPR011989	-
	Bva10g00353	311	SUPERFAMILY	ARM repeat	4	294	IPR016024	-
	Bva10g00353	311	PANTHER	KINESIN-ASSOCIATED PROTEIN	1	308	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva10g00353	23	250	U-box Gene Family	AT3G46510	27.632	6.35e-14	70.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva10g00353	-		-	gmx:121174819	343.969

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva10g00353	10	4128503	4129438	Bva10g00353	10	4128503	4129438	ECH