Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00352 ATGGATGTATCTATAGATGGAGATCCTGTAGAGAGGATGGTTTTTGAgCTTTTCTATGATGTTGCTCCCAAGACAGCAGAAAATTTCCGTGCACTATGTACAGGAGATAAGGGAGTCAGTCCCAGTACCGGAAAACAACTCCACTACAAGGGCTCTTTTATCCATCGCATTATAAAAGGATCCTTTGTGCAGGGCGGTGACTTTGTCAATCGAAACGGGACTGGTGGAGAAAGCATATATGGTTCGAAGTTCCCAGATGAATCTCCTAGAAGAAAACATGATGGACCTGGCCTTCTATCCATGCCCATCGCTGATCGTGATACACTTGGTTCTCATTTTATCATAACTTTGAAAGCTGATCACTACCTTGATAGGAAGCATGTAGTCTTTGGGAAGCTTGTCGAAGGacataatatattaaagaaaattgaagatgtGGGTGATGAGGAAGGACGTCCAACTGTAACTGtcaaaatcattaattgtGGTGAATATACCGAAGAtggaaagaagataaataagaaaataggaaGGGATGGTTCTTCTGTAGCCAGCAGTCATGAAGCCCGGCGGAAGGGAAAGCTCAAAAAATCTTCGAAAGacagaaggaaaaggagaagaagacaCTACTCGTCTGAATCAGAGAGTTCCTTAGATTCAGAAGTGGAATCTTCAGAATCTGATAGTGATTCTGACTCAGACATGTCGTCATCGTCATCATCTGACATGAGTTCTTCCAGTGGTGACAGGCGAAGGAAGAGGAGAAGATCTTCCAGGAAAGATAAACATAGACGAGGGAAAAGAAGAGATAAGCGTAGAGACAAAAGGCGAAGGAGACGGGATAAGAGATCAAAACGCAGATCAAGAAGGGAATCCGACAGTTTTACTGATTCAGATAGTGAGAGTAAAAGCGACAGTACCTCTGATAGTGAAAGTCCTGATCCTCGGAAGAAGGAGCAGAAGTGCAACGATCATCCTCAGAAAAATGCTGCTGGCATTCAGCCTTCCATAGTTGAGAAAGAACCTGCCATCCATCATAAAAAGAGGGAACAAGTGGGTGTGCCagcaaaggaagaagaatCCCCAAAGGAAAATGGAGAGGGGCGAAGCAATGGCATTAGAGCTGACTCTAGATCTGACAGAAGTGAAGAGAGGCAGCCTGACGTGATGGATGATCATCCAGGCAAATCTAGGAGCCGAAGCATGAGTCCTAAGAGACCTATGAGTAAGAGTATGAGTATTAGTCCTAGGAGAAGTGTGAGCAAGAGCCCAAGTGTTGGTCCCAAAAGGAGTCTAAGCAGAAGTCCAAGTGGTAGTGGAAGCCCTCGAGCTCCATCACGTAGGAGTTTCAGCAGAAGTCCTGTTAGAAGCATCAGCAGGAGCCCAGTGAGGGAAAGGAAGGGGAGAAGTGTCAGTAGGAGCCCTGTGAGGACACGATCTCGTAGAAGTGTCAGTGGGAGCCCTGTAAGAACTCAATCTCGTAGAAGCGTCAGTGGGAGCCCTGTGAGAACTCGATCTCGTAGAAGTGTCAGCGGGAGCCCTGTAAGATCTCTATCTAGAAGCCGCCGGAGCAGGAGTTCTCGTTCTCCTAGAGCATCATCAAGAAGATCAATTAGCAGAAGCCCTCCTGCACGGGTTTTGAGAAAGACTGTAAGCAGGAGTCCAATTAGATCATCTGCAAGAAGCTTAAGCAGAAGCTCTGGGAGGGTTCCTTCAAGGAGAAGTATTAGCCGAAGTCCTGTGAGGGCACCAAGCAGAAGTAATCGGCGCAGCTATTCTAGGAGTCCTAGTCCTGTTCGAAGGGTGAGATCACCTCGTGGGAGGAGTTTGTCTAGGAGTGTTTCACCTGATGTTTCACCAAAGCGTATCAGGAGGGGAAGAGGTTTCAGTGAGCGATATTCTTATGCAAGAAGGTACAGAACTCCTTCTCGATCTCCTGTGCGGTCATACCGCTACAATGGAAGAAGCGATCGTGACAGATATTCTGGTTACAGAAGGTACTCTCCTAGGCGTTACAGGAGTCCAGCGCGAGCAAGAACTCCACCAAGGTACAGAGGCAGAAGAAGCAGGTCTCCATCTGTATCACGTAGTCCTCGATATCGTCCTCGCCGTTATAGCCGAAGCCGGTCCCCAGTTCGTAGCCGTTCCCCAGCTGAGCCATATCGCCGGGCCTCTCCTCACAACGATAGGCGCAGGTCACCATCTCGGAGCAGGAGCAGGAGTCGGAGTCGATCAGTATCTAGGTCTTCTGTGGAATCGCAGTCTCCAAGAAGGGTGAGCAGAGACAAGTCAAAGTCAAGGTCAAGGTCATCATCATCCAGAAGCCCAGATGGAAAGAAAGGCTTAGTCTCATATGGAGATGTTTCTCCTGACTCGGGCCAAAGGTG 2387 0.4612 MDVSIDGDPVERMVFELFYDVAPKTAENFRALCTGDKGVSPSTGKQLHYKGSFIHRIIKGSFVQGGDFVNRNGTGGESIYGSKFPDESPRRKHDGPGLLSMPIADRDTLGSHFIITLKADHYLDRKHVVFGKLVEGHNILKKIEDVGDEEGRPTVTVKIINCGEYTEDGKKINKKIGRDGSSVASSHEARRKGKLKKSSKDRRKRRRRHYSSESESSLDSEVESSESDSDSDSDMSSSSSSDMSSSSGDRRRKRRRSSRKDKHRRGKRRDKRRDKRRRRRDKRSKRRSRRESDSFTDSDSESKSDSTSDSESPDPRKKEQKCNDHPQKNAAGIQPSIVEKEPAIHHKKREQVGVPAKEEESPKENGEGRSNGIRADSRSDRSEERQPDVMDDHPGKSRSRSMSPKRPMSKSMSISPRRSVSKSPSVGPKRSLSRSPSGSGSPRAPSRRSFSRSPVRSISRSPVRERKGRSVSRSPVRTRSRRSVSGSPVRTQSRRSVSGSPVRTRSRRSVSGSPVRSLSRSRRSRSSRSPRASSRRSISRSPPARVLRKTVSRSPIRSSARSLSRSSGRVPSRRSISRSPVRAPSRSNRRSYSRSPSPVRRVRSPRGRSLSRSVSPDVSPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRSDRDRYSGYRRYSPRRYRSPARARTPPRYRGRRSRSPSVSRSPRYRPRRYSRSRSPVRSRSPAEPYRRASPHNDRRRSPSRSRSRSRSRSVSRSSVESQSPRRVSRDKSKSRSRSSSSRSPDGKKGLVSYGDVSPDSGQR 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00352 795 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 10 163 IPR002130 GO:0000413|GO:0003755
Bva10g00352 795 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 164 IPR002130 GO:0000413|GO:0003755
Bva10g00352 795 MobiDBLite consensus disorder prediction 250 286 - -
Bva10g00352 795 MobiDBLite consensus disorder prediction 618 638 - -
Bva10g00352 795 MobiDBLite consensus disorder prediction 552 598 - -
Bva10g00352 795 MobiDBLite consensus disorder prediction 477 520 - -
Bva10g00352 795 MobiDBLite consensus disorder prediction 172 795 - -
Bva10g00352 795 MobiDBLite consensus disorder prediction 340 399 - -
Bva10g00352 795 MobiDBLite consensus disorder prediction 402 458 - -
Bva10g00352 795 MobiDBLite consensus disorder prediction 231 245 - -
Bva10g00352 795 Gene3D - 1 165 IPR029000 -
Bva10g00352 795 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 370 - -
Bva10g00352 795 MobiDBLite consensus disorder prediction 287 325 - -
Bva10g00352 795 MobiDBLite consensus disorder prediction 651 666 - -
Bva10g00352 795 MobiDBLite consensus disorder prediction 755 774 - -
Bva10g00352 795 MobiDBLite consensus disorder prediction 670 694 - -
Bva10g00352 795 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 1 370 - -
Bva10g00352 795 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 97 112 IPR002130 GO:0000413|GO:0003755
Bva10g00352 795 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 125 140 IPR002130 GO:0000413|GO:0003755
Bva10g00352 795 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Bva10g00352 795 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 112 124 IPR002130 GO:0000413|GO:0003755
Bva10g00352 795 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 17 32 IPR002130 GO:0000413|GO:0003755
Bva10g00352 795 SUPERFAMILY Cyclophilin-like 1 166 IPR029000 -
Bva10g00352 795 MobiDBLite consensus disorder prediction 190 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00352 Bva-Chr10 4120695 4128133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00352 16 160 U-box Gene Family AT5G67530 39.456 2.28e-19 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00352 K09566 - gmx:100800303 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00352 10 4120695 4128133 Bva10g00352 10 4120695 4128133 ECH