Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00346 ATGGCGCAGAAGATGTTTGGCATTTCAATATGTGGGAAACCAACGGATCATGATTTAGAAATGGAGAAGATGTCCAAGGACGACGGTAGCTTCTATAGCCTTACTGGTGGCCCTCTTCCTGCTCTTGGTGCCAATGCTCGCAAGAATCGAAGACACATACTCCGACCCTTTATTATGAACCCCTCTAATCATCGTTACAgACTCTGGCAGTCATTTTTGATCGTTTTAGTTTTCTACACATCATGGGTTAGCCCGTTTGAATTTGGATTCATTACGAGGGTAAAGGGTCATCTTGCTACAACGGATAATGTTGTGAATGGATTTTTTGCCGCTGACATTATTCTGACTTTCTTCGTTGCATACCTTGACAAAACTACTTATCTACTCATTGATAACCCAAAAATGATTGCTTCGAGGTATGCCAAAAGCTGGTTGGCCTTTGATGTCATCTCTACCATCCCAACTGAAGCTGCTCGGGAATGCTTGCCTCATCCTCTTAAGAAATATAGTTATTTCAGTATCCTCCGTCTTTGGCGTCTACGTAGAGTCAGTGCCATGTTTCAACGCCTGGAGAAGGACAGAACTTATAACTACTTCTGGGTTCGGTGTTCAAAGCTTACATTTGTCACTCTATTTTCAGTGCATTGTGCTGCctgtttcttctattttcttgctGCACATCGTGACCCAGCAAAAACATGGCTTGGGCTGGTTAGTGCTCTTGATGAGCGAACTGGGACAATGGAACGCTATGTAGTATCAATGTACTGGTCCATAGTGACTCTTGCTTCGGTTGGTTACGGCGACTTGCATCCTGTAAGCACAAAGGAAATGATATTCGACATTTTCTACATCTTATTTAATCTTGGATTGACTTCATATATAATAGGAAACATGACCAACTTGATTGTTCATGGGACAAGTCGAACTAGGAAATACAGAGACGCTGTCGAAGCTGTGACAGGTTTTGCACAACGGAATCAGTTGCCTAACCGCTTGCAAGAACAGATGCTTGCTCATTTATATGTGAAATACAGAACCGACTCAGAAGGACTGCAGCAAGATCTTATTGATTCCCTTCCAAACGCCATTAGATCTAGTATCTCacattatctcttttattcaTTGCTCGACAAAGTGTACTTGTTTCGTGGGGTGTCAGATGACTTACTTTTTCAACTGgTCACGGAGATGAAGGCTGAGTATTTTCCTCCAAAGGAAGACATAATTCTGCAGAATGAAGCCCCAACAAACTTCTATATATTGGTCACCGGTGCTGCAGATGTCATCACGCAAAAGAATGGAATAGAACAGGTTGTTAGAGAGGTAGGGGCAGGAGATATAGTTGGTGAAATAGGTGTGCTATGTTTCAGGCCACAGCTATTTACAATCCGAACCAAACGGCTGAGCCAGCTTCTTCGTTTGAACCGTGCTACATTTCTAAATCTTGCTAAGGCAAGTGTTGGGGACGGGACAATAATCATGAACAATTTTCTTCAGCATTTGCAAGATTTAAAGGATCCAAATATGGATCGCATTCTGGCAGACACAGAGGCCATGATGGCTCGAGGCAAAATGGATCTGCCTATGAGTTTATGCTTTGCCGCTAGCAGAGGTAATGATCTACTGTTGCATCATTTGTTGAGGAATGGTGCAGATCCAAATGAAGCAGATAGGAATGGAAGAACGGCATTGAATATTGCAGCATCTAACGGCAATAAGCAATGTATACTTCTGCTTTTAGAATATGGTGCTGATCCCAACAACAGAGATAAGAGTGGAAATATCCCACTCTGGGAAGCAATGATGGGAGGGCATAAATCTGTGATGAAGCTTCTAATGGACAATGGTGCAGACCTATTTTCTGCTGATGTAGCGCAGTTCGCAAGCACTGCTGTGGAGCAAAATAACTTGGAATTGCTCAAGGAACTTGTTGAATTTGGAGTGGATGTATCACAGGCCAAAGCAGATGGTATCACAGCGCTTCACACTGCAGTATGTGAAGGAAACGCTGAAATTGTTAGGTTCCTTGTAGAGAAAGGAGCACAGGTTGATAAGCCAGACATTCACGGATGGACTCCAAGGGCTTTGTCAGAACAACAAGGAcaggaagaaataaaagatatttttggaaaaattccACCGGCCAAAGACCAACCAATTACTCCCACGTCCAAGGATAAAATGCCTTCTTCATACTTGGGCAATTTTCACAGTGAACCCATTATGCCTCCCATTCCCCGAGACAGCATGCCATTGCCATTTGCTCAACGCCCAGATCAGAAGAGGCGAAAGTCTAACGATTTTCGCAATTCTTTGTTTGGTTTCGTGTCCTCTGCCAGTCCTGATAGGAGAGATCCCGGTGCATCTCCAAGCAAAGATACCACCGTTCCCAGGAGCATGTATAGAGTCACACTTTGTTGTCCTGAAAAGGGTGAATCTGTTAGAAAGCTCGTATTTTTGCCTCGAACCCTGCAAGAGCTGCTGGATATTGGTGAAAGAAAGTTTGGTTTCTCTGCAaccaaaattttaaccaaAGAAGGAGCCCAAGTTGAAGACATTGAACTTATAAGAGATGGGGATTATCTTGTTCTCGCACGTGATGTTGACAAAGATGCCTCCCCCAAAAAGCAAGAAGGACAGGACATGTA 2651 0.4221 MAQKMFGISICGKPTDHDLEMEKMSKDDGSFYSLTGGPLPALGANARKNRRHILRPFIMNPSNHRYRLWQSFLIVLVFYTSWVSPFEFGFITRVKGHLATTDNVVNGFFAADIILTFFVAYLDKTTYLLIDNPKMIASRYAKSWLAFDVISTIPTEAARECLPHPLKKYSYFSILRLWRLRRVSAMFQRLEKDRTYNYFWVRCSKLTFVTLFSVHCAACFFYFLAAHRDPAKTWLGLVSALDERTGTMERYVVSMYWSIVTLASVGYGDLHPVSTKEMIFDIFYILFNLGLTSYIIGNMTNLIVHGTSRTRKYRDAVEAVTGFAQRNQLPNRLQEQMLAHLYVKYRTDSEGLQQDLIDSLPNAIRSSISHYLFYSLLDKVYLFRGVSDDLLFQLVTEMKAEYFPPKEDIILQNEAPTNFYILVTGAADVITQKNGIEQVVREVGAGDIVGEIGVLCFRPQLFTIRTKRLSQLLRLNRATFLNLAKASVGDGTIIMNNFLQHLQDLKDPNMDRILADTEAMMARGKMDLPMSLCFAASRGNDLLLHHLLRNGADPNEADRNGRTALNIAASNGNKQCILLLLEYGADPNNRDKSGNIPLWEAMMGGHKSVMKLLMDNGADLFSADVAQFASTAVEQNNLELLKELVEFGVDVSQAKADGITALHTAVCEGNAEIVRFLVEKGAQVDKPDIHGWTPRALSEQQGQEEIKDIFGKIPPAKDQPITPTSKDKMPSSYLGNFHSEPIMPPIPRDSMPLPFAQRPDQKRRKSNDFRNSLFGFVSSASPDRRDPGASPSKDTTVPRSMYRVTLCCPEKGESVRKLVFLPRTLQELLDIGERKFGFSATKILTKEGAQVEDIELIRDGDYLVLARDVDKDASPKKQEGQDM 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00346 883 Pfam KHA, dimerisation domain of potassium ion channel 803 865 IPR021789 -
Bva10g00346 883 SUPERFAMILY Ankyrin repeat 526 710 IPR036770 -
Bva10g00346 883 CDD CAP_ED 382 483 IPR000595 -
Bva10g00346 883 ProSiteProfiles Ankyrin repeat region circular profile. 593 620 - -
Bva10g00346 883 SUPERFAMILY cAMP-binding domain-like 308 502 IPR018490 -
Bva10g00346 883 SMART ANK_2a 624 653 IPR002110 GO:0005515
Bva10g00346 883 SMART ANK_2a 593 622 IPR002110 GO:0005515
Bva10g00346 883 SMART ANK_2a 527 556 IPR002110 GO:0005515
Bva10g00346 883 SMART ANK_2a 560 589 IPR002110 GO:0005515
Bva10g00346 883 SMART ANK_2a 657 686 IPR002110 GO:0005515
Bva10g00346 883 MobiDBLite consensus disorder prediction 742 797 - -
Bva10g00346 883 PANTHER POTASSIUM CHANNEL AKT1-LIKE ISOFORM X1 6 870 - -
Bva10g00346 883 ProSiteProfiles Ankyrin repeat region circular profile. 657 688 - -
Bva10g00346 883 ProSiteProfiles Ankyrin repeat profile. 593 625 IPR002110 GO:0005515
Bva10g00346 883 Pfam Ankyrin repeats (3 copies) 632 705 IPR002110 GO:0005515
Bva10g00346 883 Pfam Ankyrin repeats (3 copies) 532 620 IPR002110 GO:0005515
Bva10g00346 883 SMART cnmp_10 382 499 IPR000595 -
Bva10g00346 883 ProSiteProfiles Ankyrin repeat region circular profile. 560 592 - -
Bva10g00346 883 PRINTS EAG/ELK/ERG potassium channel family signature 295 304 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva10g00346 883 PRINTS EAG/ELK/ERG potassium channel family signature 79 86 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva10g00346 883 PRINTS EAG/ELK/ERG potassium channel family signature 277 288 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva10g00346 883 PRINTS EAG/ELK/ERG potassium channel family signature 251 268 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva10g00346 883 PRINTS EAG/ELK/ERG potassium channel family signature 102 112 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva10g00346 883 PRINTS EAG/ELK/ERG potassium channel family signature 113 122 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva10g00346 883 PANTHER POTASSIUM CHANNEL AKT1 6 870 IPR045319 GO:0005249|GO:0006813
Bva10g00346 883 Gene3D - 67 304 - -
Bva10g00346 883 Gene3D Jelly Rolls 353 515 IPR014710 -
Bva10g00346 883 ProSiteProfiles Ankyrin repeat profile. 657 689 IPR002110 GO:0005515
Bva10g00346 883 SUPERFAMILY Voltage-gated potassium channels 61 304 - -
Bva10g00346 883 ProSiteProfiles KHA domain profile. 803 883 IPR021789 -
Bva10g00346 883 Pfam Ion transport protein 67 310 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bva10g00346 883 ProSiteProfiles Ankyrin repeat profile. 560 592 IPR002110 GO:0005515
Bva10g00346 883 Gene3D - 528 711 IPR036770 -
Bva10g00346 883 ProSiteProfiles cAMP/cGMP binding motif profile. 382 501 IPR000595 -
Bva10g00346 883 Pfam Cyclic nucleotide-binding domain 402 485 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00346 Bva-Chr10 4093010 4097155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00346 22 868 Ion Channels AT2G25600 57.809 0.0 1015
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00346 K21867 - gmx:100786870 1116.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00346 10 4093010 4097155 Bva06g02421 06 15517700 15523234 BWGD
Bva10g00346 10 4093010 4097155 Bva10g00346 10 4093010 4097155 ECH