Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00335 ATGAGCTCAATGGAGAGCAGTGACATATCCAAAGTTGATAGTTTACGTGCGAGTAGTTCTAGCATATGGAGAAACAATAGCATGGATGTTTTTGCAACATCTACTCgtgaagatgatgaagaagctCTAAAATGGGCAGCAATAGAGAGATTGCCTACTTATCTACGTATAAGGAGAAGCTTACTCACTAATGCAGAGGGTAAAGGGAGAGATGTTGTTGATATAAGGAAATTAGGACTAACAGAGAGAAAGATTCTGTTAGAGAGACTCGTGAAAATAGCAGAAGAAGATAATGAAAAGTTCTTGTTGAAACTCAAGAAACGGATGGACCGAGTTGGAATTGAAATTCCTACAATTGAAGTTCGGTTTGAGAATATAAATGTGGAGGCAGAAGTCTACGCTGGAAGCAGAGCATTGCCTACTTTACTCAACTTCTTTGCAAATGTATTAGAGGGATTCTTGCATTATCTTCGCATCATTCCAAGTCCAAAGAGACCGTTACACATCCTTCAGAATGTTAGCGGAATCATCAAGCCTCGAAGaaTGACATTGCTTTTAGGCCCTCCAAGCTCTGGAAAAACGACTTTGCTATTGGCGCTGGCTGGAAAactagacaaaaatttaaaaTACTGTGGAAGAGTAACATATAATGGACATGCGCTGGAAGAGTTTGTACCACAGAGGACATCAGCCTATATAAGTCAGAATGATACCCACATTGGAGAAATGACTGTAAGAGAAACGCTAGCCTTTTCAGCAAGATGCCAAGGCGTTGGCCAGAATTATGAGATGTTGGCAGAACTgctgagaagagaaaaggacgCAAATATCAAGCCAGATCCTGATGTTGACGCCTATATGAAGGCAGCAGCACTGCAAGGCCAGGAAACGAGCGTGGTGACAGACTACATTCTCAAGATTTTGGGACTTGAAGTCTGTGCTGATATTATGGTAGGAGATGGAATGACAAGAGGTATCTCAGGTGGGCAGAGAAAGCGAGTCACAACAGGGGAGATGCTGGTTGGACCTATAAGAGTGTTCTTCATGGATGAGATATCAACTGGTTTGGACAGCTCAACAACCTTCCAAATAATCAATTCGATTCGGCAATCAATTCATATCCTTAATGGAACTGCACTTGTCTCTATCCTTCAACCAGCACCAGAAActtatgaattatttgatgataTAATACTTGTCACAGATGGGCAAATAGTGTTCCAAGGTCCTAGAGAAAACGTACTTGAGTTCTTTGAATCCATGGGCTTCAAGTGTCCTGAAAGAAAAGGAGTTGCTGACTTCTTACAAGAAGTGacatcaaagaaagaccaatggCAGTACTGGGCACATAAAGATGAACCTTACAATTTCGTTACCTCGAAGGATTTTGCTGAAGCCTTCCAGTGCTTTCACGTTGGTCAAAAGCTTGGAGACGAGTTGGGGACTCCTTTTGACAAGTCTAAATGTCACCCAGCTTCCTTGACCAAAAGCAAGTATGGTGTCAGCAAGAAGGAGCTGCTTAAGGCTTGTATCAGCAGAGAATTTTTgcttattaaaagaaattcatttgTCTACATATTCAGAGCTACCAACCTTACTTATTTAGCTATCATGACAACAACGTTGTTTCTACGAACTACGATGCATCGAGATACCTTGGCCGATGGAGGAATTTATATGGGTGCTCTGTTCTTCGCAGTCGTTGTGGCCATGTTTAATGGAATATCAGAACTAAACATGGTCATCACGAAACTTCCTGTCTTTTACAAGCAAAGAGACCTTCTTTTCTACCCTTCGTGGGCTTATTCTATACCACCATGGATCCTCAAATTACCAATAACCCTAGTAGAAGTTGCCATTTGGGTTGGCATAACTTATTATGCCATTGGCTTTGATCCAACTATAGAAAGGCTTTTCAAACAGTACTTATTACTCCTCTGCCTTAACCAGATGGCATCTTCACTATTCCGCTTGATGGCAGCATTAGGAAGGGACATAATAGTTGCAAACACCGTTGGGTCATTCGCTTTACTTACAGTTATGGTTTTGGGTGGATTTGTCTTTTCAAGAGACAATGTACCGAAATGGTTTCTTTGGGGCTACTGGTCCTCACCACTGATGTACGGTCAGAATGCTATAGCTGTGAATGAATTTCTTGGGAATTCTTGGAAAAAGGTTCTTCCAAATTCCACTGAAACATTGGGAGTTTTGGTATTGAGATCTCGTGGATTTTTCCCAGAAGCTTATTGGTATTGGATTGGAGTAGGAGTATTGATTGGTTATGTCTTTCTGTTTAATTTCCTCTTCACTTTGGCAATGCAGTATCTCAGTCCATTCAGAAAAGTCCAGGCAGGGCCATCCCAAGATAAATTGCTCGAGAGAAATGCTTCCAAAACTGGACAGTTCGTCGAACTATCTACACCAAGGAGAAAGAAATCTTCTGAAACGAAGAATGAAGAAGTAGGTGTATTTTCCGAATCATTTTCTGGAAGAGTAAGTGATGGTAAAGCTAGTGGAATTGGGAAGCGGGGTATGGTTCTTCCTTTTCAACCATTAGCCCTCACATTTGATGAGATCAGATATTCTGTAGATATGCCACAGgaaatgaaaaatcaaggaGTTTTCGAGGATCGTCTCGAACTTTTGAAGGGTGTTAGCGGTGCCTTTAGGCCAGGAGTCCTAACAGCTCTGATGGGCGTAAGTGGTGCCGGCAAGACCACTCTAATGGATGTTTTAGCTGGACGGAAAACTAGTGGATATGTTGAAGGAAGCATCAAAATATCTGGGTATCCAAAAAAGCAAGAGACATTTGCTCGCATATCAGGATACTGTGAACAATTTGATATCCACTCACCCTATGTTACAGTTTATGAGTCTTTGCTATATTCTGCATGGCTTCGTTTACCCACTGAAGTTGATCATCCAACTAGAAAGATGTTCATTGAGGAAGTTATGGAGCTAGTGGAGCTTAACACGTTAAGAGAAGCACTCGTTGGATTGCCGGGCGAGACTGGACTTTCAACTGAGCAGCGGAAGAGGCTTACGATTGCAGTTGAACTTGTAGCCAACCCAAGTATAATATTCATGGATGAACCAACCTCTGGTCTTGATGCCAGAGCAGCAGCAATTGTAATGAGAACCGTGAGAAACACTGTGGATACTGGACGTACAGTGGTTTGTACCATTCACCAGCCAAGCATTGATATATTTGATGCCTTTGATGAGCTACTACTTCTGAAACTGGGAGGGGAGCAAATATACGCTGGTCCATTAGGCCACCACTGTTGCCATCTGATCCAGTACTTTGAGGCTATTGAAGGAGTATCTAAGATCAAAGATGGTTATAATCCTGCAACCTGGATGTTGGAAGTTACTTCAGCAGGAACAGAAGCAAGCCTTGGAGTCAACTTCACCAATCTATACAGAAAGTCAGATTTGTACCGAAGGAATAAACAATTGATCGAGGAGCTTAGCGTACCGCATCAGGATTCAAAAGATCTATACTTCGCTAATCAGCATTCACAGACTTACTTCACACAATGTATAGCTTGTCTATGGAAACAGCATTTGTCTTATTGGCGGAACACATCATATACTGCAGTGAGACTCTTATTCACAACAATCATAGCTTCGTTGTTTGGGGTGATTTTTTGGAACATTGGCCTCAACAGGAAAAGAGAGCAAGATCTTTTCAATGCCATGGGTTCAATGTATGCCGCTGTTATCTTCATTGGAGTACAAAATGGTTGCTCGGTGCAGCCAATAATAGCAGTTGAGAGAACAGTCTTCTACAGAGAAAGAGCTGCTGGAATGTACTCAGCTTTACCATATGCCATGGCGCAGGTCATTATCGAGCTTCCCCACATTTTGGTTGAGGCACTGATTTATGGGGTTATAGTGTATGCCATGATGGGATTTGAATGGACAATATCCAAGTTCTTCTGGTTTCTCTACTTCACGTACTTCTCCTTTTTATACTTCACATTTTATGGTATGATGACCATGGCAATCACCCCCAGCCCACACGTCGGTGGCATTTTATCGACCGCCTTCTATGCAATGTGGAACCTTTTCTCAGGCTTCGTCATTCCCTTGTCGAGAATACCAATATGGTGGAAATGGTACTACTGGATTTGCCCAGTGGCGTGGACCTTAAATGGATTGCTTGCTTCCCAGTACGGAGACGTAAAGGAGAAGCTCGAGTCTGGCCAAACAATTGAGGAATTCGTTAGGAGTTACTTCGGATTTAAACATGAACTCGTCGGATTGGTCGCAGTTGTGGTGGCGGGTTTTGCGGCGTTTTTCGCACTCATCTTCGCCTTCGGTATCAAAGCTCTTAACTTCCAGAAAAGATG 4355 0.4124 MSSMESSDISKVDSLRASSSSIWRNNSMDVFATSTREDDEEALKWAAIERLPTYLRIRRSLLTNAEGKGRDVVDIRKLGLTERKILLERLVKIAEEDNEKFLLKLKKRMDRVGIEIPTIEVRFENINVEAEVYAGSRALPTLLNFFANVLEGFLHYLRIIPSPKRPLHILQNVSGIIKPRRMTLLLGPPSSGKTTLLLALAGKLDKNLKYCGRVTYNGHALEEFVPQRTSAYISQNDTHIGEMTVRETLAFSARCQGVGQNYEMLAELLRREKDANIKPDPDVDAYMKAAALQGQETSVVTDYILKILGLEVCADIMVGDGMTRGISGGQRKRVTTGEMLVGPIRVFFMDEISTGLDSSTTFQIINSIRQSIHILNGTALVSILQPAPETYELFDDIILVTDGQIVFQGPRENVLEFFESMGFKCPERKGVADFLQEVTSKKDQWQYWAHKDEPYNFVTSKDFAEAFQCFHVGQKLGDELGTPFDKSKCHPASLTKSKYGVSKKELLKACISREFLLIKRNSFVYIFRATNLTYLAIMTTTLFLRTTMHRDTLADGGIYMGALFFAVVVAMFNGISELNMVITKLPVFYKQRDLLFYPSWAYSIPPWILKLPITLVEVAIWVGITYYAIGFDPTIERLFKQYLLLLCLNQMASSLFRLMAALGRDIIVANTVGSFALLTVMVLGGFVFSRDNVPKWFLWGYWSSPLMYGQNAIAVNEFLGNSWKKVLPNSTETLGVLVLRSRGFFPEAYWYWIGVGVLIGYVFLFNFLFTLAMQYLSPFRKVQAGPSQDKLLERNASKTGQFVELSTPRRKKSSETKNEEVGVFSESFSGRVSDGKASGIGKRGMVLPFQPLALTFDEIRYSVDMPQEMKNQGVFEDRLELLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGSIKISGYPKKQETFARISGYCEQFDIHSPYVTVYESLLYSAWLRLPTEVDHPTRKMFIEEVMELVELNTLREALVGLPGETGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKLGGEQIYAGPLGHHCCHLIQYFEAIEGVSKIKDGYNPATWMLEVTSAGTEASLGVNFTNLYRKSDLYRRNKQLIEELSVPHQDSKDLYFANQHSQTYFTQCIACLWKQHLSYWRNTSYTAVRLLFTTIIASLFGVIFWNIGLNRKREQDLFNAMGSMYAAVIFIGVQNGCSVQPIIAVERTVFYRERAAGMYSALPYAMAQVIIELPHILVEALIYGVIVYAMMGFEWTISKFFWFLYFTYFSFLYFTFYGMMTMAITPSPHVGGILSTAFYAMWNLFSGFVIPLSRIPIWWKWYYWICPVAWTLNGLLASQYGDVKEKLESGQTIEEFVRSYFGFKHELVGLVAVVVAGFAAFFALIFAFGIKALNFQKR 1451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00335 1451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 427 IPR027417 -
Bva10g00335 1451 SMART AAA_5 891 1083 IPR003593 -
Bva10g00335 1451 SMART AAA_5 179 411 IPR003593 -
Bva10g00335 1451 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 154 427 IPR003439 GO:0005524
Bva10g00335 1451 PANTHER ATP-BINDING CASSETTE TRANSPORTER 11 1451 - -
Bva10g00335 1451 Pfam Plant PDR ABC transporter associated 723 784 IPR013581 -
Bva10g00335 1451 Pfam ABC-transporter N-terminal 94 145 IPR029481 -
Bva10g00335 1451 Pfam ABC transporter 882 1034 IPR003439 GO:0005524
Bva10g00335 1451 Gene3D - 158 463 IPR027417 -
Bva10g00335 1451 Gene3D - 868 1097 IPR027417 -
Bva10g00335 1451 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 854 1106 IPR003439 GO:0005524
Bva10g00335 1451 Pfam ABC-2 type transporter 385 438 IPR043926 GO:0140359
Bva10g00335 1451 PANTHER ABC-2 AND PLANT PDR ABC-TYPE TRANSPORTER FAMILY PROTEIN 11 1451 - -
Bva10g00335 1451 Pfam ABC-2 type transporter 506 718 IPR013525 GO:0016020|GO:0140359
Bva10g00335 1451 Pfam ABC-2 type transporter 1179 1393 IPR013525 GO:0016020|GO:0140359
Bva10g00335 1451 CDD ABCG_PDR_domain2 851 1089 IPR034003 -
Bva10g00335 1451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 870 1090 IPR027417 -
Bva10g00335 1451 Pfam ABC transporter 170 352 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00335 Bva-Chr10 4035975 4043485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00335 879 1066 Calmodulin-binding Proteins AT2G36910 25.616 7.70e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00335 K08711 - gmx:100810505 2418.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00335 10 4035975 4043485 Bva06g02429 06 15548542 15555268 BWGD