Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00334 ATGGAGGAAATTGAAGGGCTCAATAGTAGTGAAGCTAGGAGCTCCAGTGAGAGTCGACCTCCAAATCCTCTTACTGCAGCATATCGTCAATCTCTCAACACTGACCGTGTTGCGGTGCCATGCAAGAAATCACTTGTTCGGCACCCTTCTCTTATGAAGACGAAGGTGTCTGATGCATCTGCTGAGACAGGGCATGCTATGGAAGTTTCTGAATCCGAGTTCCTTCCTAAGCTCCGTTCTGGAGCGTGGGCTGATATTGGGTATCGATCTAGCATGGAAGATGTGTATGTTTGTGTGGACGACTTCATGCAGGATTATGGGCTTAAGAACCATGTAGATGGGCCCAGTGCTTTCTATGGGGTATTTGATGGACATGGTGGGAAGCATGCTGCTGATTTTGCATGTCATCATTTGCCGAAGTACATTGTTGACAATGAAGATTTCCCAGGGGATATTGAGAGGATTGTTTCTTCAGCATTTCTTCAAACAGACGCTGCCTTTGCAGAAGCCTGCTCTCTCGACACTGCTCTTGCTTCTGGTACCACTGCATTGGCCGCTCTTGTAATTGGAAGATTGCTTGTGGTGGCAAATGCTGGAGATTGTCGAGCAGTGCTTTGCCGTCGTGGAAAAGCAATTGAAATGTCAAGAGATCATAAACCGATGTGCAGCAAAGAGAGAATGCGCATTGAGGCATCTGGGGGTTATGTGTATGATGGATATCTCAATGGACAACTTAATGTTGCTCGTGCTCTTGGTGACTGGCACATGGAAGGAATGAAAGACAGAGATGGTGGACCACTCAGTGCAGAGCCTGAACTCATGACTAGAAAACTAACCGACGAGGATGAATTTCTCATCATAGGTTGCGATGGGATTTGGGATGTATTTAGGAGCCAAAATGCGGTGGATTTTGCTCGGCGCAGGCTTCAGGAGCATAATGACCCAGCAATGTGTAGCAAGGATCTGGTTGACGAGGCTTTGAAGAGAAAGAGCGGAGACAATTTAGCTGTTGTTGTGGTGTGCTTCCAGCAGCAGCCCCCACCTAACTTGGTGGCACCACGTTCTAGAGTGCACAGGAGTTTCTCTGCTGAAGGTTTGAGGGAGTTGCAGAGCTTTTTGGATAGCTTGGCTAATTG 1136 0.4754 MEEIEGLNSSEARSSSESRPPNPLTAAYRQSLNTDRVAVPCKKSLVRHPSLMKTKVSDASAETGHAMEVSESEFLPKLRSGAWADIGYRSSMEDVYVCVDDFMQDYGLKNHVDGPSAFYGVFDGHGGKHAADFACHHLPKYIVDNEDFPGDIERIVSSAFLQTDAAFAEACSLDTALASGTTALAALVIGRLLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERMRIEASGGYVYDGYLNGQLNVARALGDWHMEGMKDRDGGPLSAEPELMTRKLTDEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPAMCSKDLVDEALKRKSGDNLAVVVVCFQQQPPPNLVAPRSRVHRSFSAEGLRELQSFLDSLAN 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00334 378 PANTHER PROTEIN PHOSPHATASE 2C 54 364 IPR015655 GO:0004722|GO:0006470
Bva10g00334 378 SMART PP2C_4 69 340 IPR001932 -
Bva10g00334 378 MobiDBLite consensus disorder prediction 1 26 - -
Bva10g00334 378 CDD PP2Cc 79 342 IPR001932 -
Bva10g00334 378 MobiDBLite consensus disorder prediction 8 26 - -
Bva10g00334 378 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 54 364 - -
Bva10g00334 378 Pfam Protein phosphatase 2C 87 334 IPR001932 -
Bva10g00334 378 ProSitePatterns PPM-type phosphatase domain signature. 118 126 IPR000222 GO:0043169
Bva10g00334 378 Gene3D - 58 346 IPR036457 -
Bva10g00334 378 ProSiteProfiles PPM-type phosphatase domain profile. 79 342 IPR001932 -
Bva10g00334 378 SUPERFAMILY PP2C-like 70 344 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00334 Bva-Chr10 4031782 4035931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00334 1 378 PP2C-type Phosphatase Gene Family AT2G25620 70.663 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Bva10g00334 PP2C 6.4e-69 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00334 K14803 - zju:107421256 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00334 10 4031782 4035931 Bva10g00334 10 4031782 4035931 ECH