Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00327 ATGGCTCAGCATAACAATGGCAGCAATAGTACTAGCCAACAGTTAGTGAAGCCGACATTCCATGACTTTCTGGGCACGAAGCCCACTGATTCACCCGTGATTTTGGCTCCTAACACCACTGATGTGAGGCTGTCGGAGGCGTCGGCATCGGTGTCTGTTGGCGCCTCTTCTGGTGCTGCCCGTGGTCCCTTCTCAACCACCTCTGATGTCGGTTCTGAAAGACAAGTAGGAAATCATCTCGAGGGAATTCCATTCTATGGCCCAAGGAGTGATTTTTCTGGCACTGAGATAAGTAACAGACTAGTAGGAAGCAAGCGAAGTAATTCTGATTCCACTTTTATGGGTTCCTCCAGAGATGCCTTCCAGATGGTCCCGGACTCCCTCCAAAACTCACATTTGATGAAGATGCTTCGTAATGCAGCTGGAGGAGAGCGACATAGAAGATCTAATGATGATGAAGTGTTCATTGGTGTGCAGCCTTTGAAGTCAACTTCTGCATCTCAGATGTTTCAGCCTCCCAGCAGCACTAAATGGGAGCGATCTGTTCTCATGAATGTTGCCCCTTCCATGCAGCATCCACCACGTGGAGGTCAATTGGCATCTTTTGTCCACCAGATGGGTTCAAATAAGATCAGGGATACCAATGCTGGACCTTCATTTATCTCTCAGTCTGCTGCTGATGAAGGTTCTCGAACTGGAATCAAGGGCCCTGGAATTTTGAGTTCTATAAACCCAACCACTACTGCCTCTGAGAAAATACCTTCTGCAGTGCTGCTAGGTGGAAGCAGGCAAAAGCCTGTGATTAATGTAATCGACCCAGAATCTTCCACACCGCCAAGtCGACATGGGTTGACATCTGCCAGCCGCCAGATGACCATATTTTATGGAGGTCAAGCTCACGTGTTTGATGATGTCCATCCCAATAAGGCAGACATTATAATGGCTTTAGCCGGATCAAATGGTGGATCTTGGTCCACAACATACTCTCCCAAATCTTCTGCGAAGCCGGTTAATGATAGTAACTTGCTAACTGGAGAAAATGAAACAGGGATAGCGAGTAACAAGGCATTCCCGCAGGAACTTCATGGGAGATTATCTATCACTGGTACTTCTGGTCATGCCATAGCTATTGGCTCCGGTGACCAAGTATCTACTCCGGCACCAGCAGGGGGAAGCATTGTGGCTAAAGAAACGAGAAACCCAACTCAAGCAGCAGATCCCAGTTCTGAAGACAAAAGAGCACAATG 1247 0.4779 MAQHNNGSNSTSQQLVKPTFHDFLGTKPTDSPVILAPNTTDVRLSEASASVSVGASSGAARGPFSTTSDVGSERQVGNHLEGIPFYGPRSDFSGTEISNRLVGSKRSNSDSTFMGSSRDAFQMVPDSLQNSHLMKMLRNAAGGERHRRSNDDEVFIGVQPLKSTSASQMFQPPSSTKWERSVLMNVAPSMQHPPRGGQLASFVHQMGSNKIRDTNAGPSFISQSAADEGSRTGIKGPGILSSINPTTTASEKIPSAVLLGGSRQKPVINVIDPESSTPPSRHGLTSASRQMTIFYGGQAHVFDDVHPNKADIIMALAGSNGGSWSTTYSPKSSAKPVNDSNLLTGENETGIASNKAFPQELHGRLSITGTSGHAIAIGSGDQVSTPAPAGGSIVAKETRNPTQAADPSSEDKRAQ 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00327 415 PANTHER PROTEIN TIFY 8 58 414 - -
Bva10g00327 415 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 58 414 IPR040390 -
Bva10g00327 415 SMART tify_2 284 319 IPR010399 -
Bva10g00327 415 ProSiteProfiles Tify domain profile. 284 319 IPR010399 -
Bva10g00327 415 MobiDBLite consensus disorder prediction 223 246 - -
Bva10g00327 415 Pfam tify domain 286 318 IPR010399 -
Bva10g00327 415 MobiDBLite consensus disorder prediction 377 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00327 Bva-Chr10 3988698 3993363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00327 1 317 Tify Gene Family AT4G32570 40.719 6.31e-57 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Bva10g00327 tify 5.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00327 - - gmx:100807222 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00327 10 3988698 3993363 Bva06g02439 06 15599412 15603635 BWGD