Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00313 ATGGCAAACCGGATGAAAGAAGATGacagaattgaaaaaataatacgTGGTCTTCTGAAACTGCCTCATAATCGAAGATGTATCAACTGCAATTCTTTGGGGCCACAATACGTCTGCACAACTTTCTGGACATTTATCTGCACAAACTGCAGTGGAATACATCGAGAATTCACACACAGAGTAAAATCGGTATCGATGGCCAAATTTAATGCAGAAGAAGTCAGTGCTCTCGAAGCAGGAGGCAATGAGaaagcaaagcaaatcTATTTTAAAGAATGGGACTCCCAGCGTCATTCATTTCCTGATTCCAaTAACATGCACAGGCTTCGAGATTTTATCAAGAATGTTTACGTGGATAGAAAATTTACTGGTGAAAGGAGTTCTGATACGCTTCCTGCGCTTAGATTGAATGACAAGAAGGAGTCCCATGAAAGTAGAAAGGTTAATGCATCTCGGCTTGGATCCAAAAGCGCAAATTATGAGGAAAGGTTTGAAAGATATGGAAGATCCAGTCCTAATCTAAGAAGTGATGACGCGAGTTTTAGATTTCACTATGATGAAAGAAGAAGTCCTAGATATGCCCAACAGCTTTCAAGGAATGCCCACCAGAGAAGTCCTAAAAATTTTGAGGTTGTCGATGATAGGTTCCGTGATGATGAATTCAGAAGTCGTAGACTTTCAAATTTAGAATCGAAGCTCAAAAAGCTTTCACAGGATGGTCAGAATAATGTGGAACGCTCCCAACCCCCTGTTGCTGAGGCTGTTGGAGAATCTATTGGGAAGAATGTTCCATCCTTACAGGTAGGTCAAAGACAAAAGAAGGAAGCTGATGATTCAAGGCAAAATCAGAAAGTTGCTCCCTCCAGTGGTTTTGGCCCCTCAAAGGAGCATCCAactgaacaaaaaaatgataatccaaaaagtttgattaatttgagtaCCCAGTCCCAGGTCTCTGATGCTACAGTTAGACCGCAAACACATACTATATCTCAATCAAGTGAAGACAACTGGGCCACATTTGAACTTTTTGCAGCAGAGAATGCACCTCAAACTCCAAAAGCAAATACCTTGGAAACTACCACAACAGAAAGGACACCTGAAACTGCAACTGCAAATACTTTAGAATCTATCCTTTTTGAATTGTCAGGTCCATTTTATGCAATGTCTGGTGGCTTGTCTGAAGTCCCAAGCATTGCTGACGGTCCATCAACAGCAACTGTAGAACATGTGTCTGCTGGTAGGGATTTGCCACCTCCTTCTGTAGGACAGGCAACTGCATTACCAAATGACACTAGTGCTATGTCAGTTACATCAACCACTGTCACCATACCGGGACAACCTTCTAATGGCGTGCCTCCACAAGTTGAACGTTATGGCAGGGATGACTCAGTTCAAGTTTCACATGGACAGCAATTACCGAGCATGCAACTACCTTCTGAATCATCAAGCAATGGCTCTACGACACAAACAACAAGACAACCATCCAGAACTGAAGCTTTAAGTAATCAGCCATTCGTCGTTGCTCCTAATACACGAGACTCTTGGAGTGCTTTTGCTGAATCATCTGGTCAAACCACGTCAAAACCCGCTCAAGACTCCAGATCTGAAATTAGACCCCAACCTAGTCCTGTGGAAAACAAGTTAAGTGGAAGAAAGGAGCTTCCAGAGGACCTCTTTACTGCAAGCTACTTATCTGGTCTCGCACCAGGTTGGCATAGTGTTCAACCCCGTGGCTCGGCATTCGGCATGCAATGTTATCCTAATGCAGTGCCTCGCTCAGCATTTCCAGTTGTCGCGTCAACAAACCCATTTAATGTAACTGAGGGAAAAGCTCAAGTGCAAGCCTCACCATTTCCTACGATGGCAACTTTGCAAGATGCACTACCTGCCGGATCTGCCAAAACAGGATTATCGCATGCTTCAAGCCTTGGGTCTTCCGGGTTGACGGTGCCTCAGTCTCCAAGTTATGCATCTCTGGGGCCGCCACAGTCCCCCTTCGCACAAGAGGAATCTCTCTTTGCTCCTCCCCGATCTCCCTTCTCACGGTCACTATCTTCCTTTGCATCTGGAATCCCCGCTGGCGCATACGATGAGGAAGTTCATAGTACTACGCAACCTTCCAGACCTCAAAGAGTTCATAGCTTCAGTAATGACAGAACTGCTTTTGGATCCTCAGCCACAACTCAGCAGTTAGGCGGATATGGAGTGGCATCCACCACCCCCCATTCTTTTTCTAAGAAAGGAGGAAATCCATTTGAATA 2264 0.4346 MANRMKEDDRIEKIIRGLLKLPHNRRCINCNSLGPQYVCTTFWTFICTNCSGIHREFTHRVKSVSMAKFNAEEVSALEAGGNEKAKQIYFKEWDSQRHSFPDSNNMHRLRDFIKNVYVDRKFTGERSSDTLPALRLNDKKESHESRKVNASRLGSKSANYEERFERYGRSSPNLRSDDASFRFHYDERRSPRYAQQLSRNAHQRSPKNFEVVDDRFRDDEFRSRRLSNLESKLKKLSQDGQNNVERSQPPVAEAVGESIGKNVPSLQVGQRQKKEADDSRQNQKVAPSSGFGPSKEHPTEQKNDNPKSLINLSTQSQVSDATVRPQTHTISQSSEDNWATFELFAAENAPQTPKANTLETTTTERTPETATANTLESILFELSGPFYAMSGGLSEVPSIADGPSTATVEHVSAGRDLPPPSVGQATALPNDTSAMSVTSTTVTIPGQPSNGVPPQVERYGRDDSVQVSHGQQLPSMQLPSESSSNGSTTQTTRQPSRTEALSNQPFVVAPNTRDSWSAFAESSGQTTSKPAQDSRSEIRPQPSPVENKLSGRKELPEDLFTASYLSGLAPGWHSVQPRGSAFGMQCYPNAVPRSAFPVVASTNPFNVTEGKAQVQASPFPTMATLQDALPAGSAKTGLSHASSLGSSGLTVPQSPSYASLGPPQSPFAQEESLFAPPRSPFSRSLSSFASGIPAGAYDEEVHSTTQPSRPQRVHSFSNDRTAFGSSATTQQLGGYGVASTTPHSFSKKGGNPFE 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00313 754 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Bva10g00313 754 MobiDBLite consensus disorder prediction 633 680 - -
Bva10g00313 754 PANTHER ARFGAP/RECO-LIKE ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 754 - -
Bva10g00313 754 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Bva10g00313 754 MobiDBLite consensus disorder prediction 425 450 - -
Bva10g00313 754 CDD ArfGap_AGFG 12 122 - -
Bva10g00313 754 MobiDBLite consensus disorder prediction 315 334 - -
Bva10g00313 754 Gene3D Arf GTPase activating protein 1 133 IPR038508 -
Bva10g00313 754 MobiDBLite consensus disorder prediction 133 150 - -
Bva10g00313 754 MobiDBLite consensus disorder prediction 701 747 - -
Bva10g00313 754 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Bva10g00313 754 PANTHER ARFGAP/RECO-RELATED 1 754 IPR044820 GO:0005096
Bva10g00313 754 MobiDBLite consensus disorder prediction 465 543 - -
Bva10g00313 754 MobiDBLite consensus disorder prediction 698 754 - -
Bva10g00313 754 MobiDBLite consensus disorder prediction 636 666 - -
Bva10g00313 754 Pfam Putative GTPase activating protein for Arf 13 124 IPR001164 GO:0005096
Bva10g00313 754 MobiDBLite consensus disorder prediction 409 552 - -
Bva10g00313 754 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Bva10g00313 754 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Bva10g00313 754 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Bva10g00313 754 MobiDBLite consensus disorder prediction 254 308 - -
Bva10g00313 754 MobiDBLite consensus disorder prediction 133 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00313 Bva-Chr10 3897958 3903787 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00313 15 156 C2H2 Transcription Factor Family AT4G05330 35.374 5.82e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00313 - - lang:109327488 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00313 10 3897958 3903787 Bva10g00313 10 3897958 3903787 ECH
Bva03g00618 03 3649404 3656908 Bva10g00313 10 3897958 3903787 ECH
Bva04g00782 04 5113529 5119653 Bva10g00313 10 3897958 3903787 ECH