Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00302 ATGGAGGCCGCCATGGACGAGAACTCGAATCAAAACCAAGGCCAAGACCAAGTCCCACCGCCACTTCCAGTGGCAGAATCTCAGTCCCAGCCTCAATCGCTAGATGGAGAGGAAGAAGACGAGTctaagaaggaagaagaggagTTTATTGCGAAGGCGCACAAGTTAATGGACAAGATCACCTCTGCTCCTGATAACCCTAAACCTACCGTCCTCCATGCCCTTGCCACCATTCTTGAAAAACAGGAGTTACGATACTTGGAGGACAATGGTTATTCTTCCTCTAGTAATGCTCGTGCTTCGCATAATGTAGGGCGCCTTGGGAGCTTAATCCGGGAAAACGATGATTTCTTTGAATtaatatcttcaaaatttctctCAGAAACAAGATACTCGACTTCTATTCAGGCAGCTGCTGCAAGGGTTCTTTTAAGCTGTTCATTAACTTGGATTTATCCTCATGTTTTCGAAGAATCTGTCCTGGAGAATATAAAAGGTTGGGTGATGGATGAGAATACTAGATCATCTGCTGAAGATCAGAACCTAAAGTGTAATCTAGGAAGAAGGGAAGGCACGGATACTGAAATGTTGAAAACCTATGCCACTGGACTCCTTGCTGTTTGTTTGGCCGGTGGTCAAGTAGTGGAAGATGTCTTGACATCTGGTTTATCAGCTAAGCTTATGCGCTACCTTCGATTGCGTGTTCTTGGGGAGATGAGTAGCAACCAGAAGGATGCTCCTTTAATGGAGAGTAGGCATACGTCTGGGACTACTTCCATGAGAGGTAGAGATGAAAGTCGTGGCAGGTTACGACAAGCCTTGGAATCAAGTCATTTAGATGATACAAAGATGATTGTTGATAAATCTTTAGATGACCGAACCCTGGAAAGGGATCAAGATAGAAGCATTAGTGGGCAGGCTTGCAAAGAAGATTCTTGGATTGACGGTGAACCACCTGATGGATTGGAGGAAGGTGCTGGTATATGTGAGGTAGATGCTGATGGGGAAGATAGATGGCACAATAGAGATTTACGTGATGGAAGGATAAAATTTGGTGATCATGATGAGAATGCAAAGGATGACTCTTCTAAGCGGCGCGTGAATCGAGGATTGGTGAGATCCAGAGGAAAGGGAAGGGCTAGTGAAGGGACTGTAGAAAGTGAACCAGTTTTGTTGTCCCCAAATTCTGGTGGTCGGTTAGGACAGGGAAGGTATGTCAGAGATAGGAGCGTATCAAGGAGTGCTGATGTTAAAAGGCTGCCTGATCCGAAGAAGACTCTTGCCAGGATCACGTCTGACGCTTCTGTTGTGGAAAGAGAGGATAATGATGATTGTTTCCAAGAGTGTCGAATTGGAAGTAAAGATATCTCTGATCTTGTTAGGAAAGCAGTCCGAGCTGCAGAAGCTGAAGCTAGAGCAGCCAGTGCACCTGAAGAAGCTGTCAAAGCAGCTGGTGATGCTGCTGCTGAAATAGTTAAAACTACAGCTTTGGAGGAATTTAAATCCAATAATGATGATGAAGCTGCATTTTTGGCTGCTTCTAGAGCTGCATCAACTGTTATTGATGCTGCATCTGCAATTGAAGTTTCAAGGAGCTTAAGCAGCATCAAAGCTGAGACAGAGACTGCAAGCAGAGAAACAGAGTCCAGTGAAGACGTTGAAGAATATTACATCCCAGATGCAGAATCACTTGCACAATTGAGGGAAAAATATTGCATTCAGTGCCTTGAGATACTTGGTGAATATGTAGAAGTTCTTGGTCCTGTATTGCATGAGAAGGGTGTAGATGTGTGCCTTGCACTCCTCCAACAGAATTCTAAACACCGAGATCCACCCAAGGTGGCCCTGCTGTTGCCTGATATCATGAAGCTGATCTGTGCTTTAGCTGCTCATCGGAAATTTGCTGCACTCTTTGTGGACCGAGGGGGCATGGAAAAACTTCTTTCTGTCCCTAGAATGGCTCAAACgttttttggcctttcttcttgtttatttaCCATTGGTTCCTTGCAGGGGATAATGGAGCGGGTATGTGCTCTTCCATCAGATGTTGTCTATCATGTGGTTGAGTTGGCTCTCCAACTACTTGAGTGCTCCCATGACCATGCCAGGAAGAATGCAGCATTATATTTTGCTGCTGCGTTTGTCTTTAGGGCGGTTCTTGATGCTTTTGATTCACAGGATGGATTACAGAAGTTACTGGCCCTTTTAAATGATGCTGCTTCGGTAAGATCAGGAGTAAATTCTGGTGCACTGGGACTCTCGAATCCAGGATCACTTAGAAATGATCGATATCCTGCAGAAGTGCTGACATCATATGAGAAGCAGATAGCCTACCATACGTGTGTTGCTCTGCGTCAATATTTCAGAGCACATCTCCTTTTACTTGTGGATTCTTTTCGTCCTAACAAAAGCAATCGTAGTGCTGCCAGGAATACTTCAAGTGTAAGGGCTGCATACAAGCCGGTTGACATTAGTAATGAAGCAATCGAAGCAGTATTCCTGCAGTTGCAGAAAGATCGGAAGCTAGGTCCTGCGTTTGTGAGAACTCGTTGGCCTGCAGTTGAGAAGTTCTTGCAATATAGTGGACATATTACCATGTTGGAATTGTGTCAGGCGCCACCTGTGGAACGGTATCTTCATGATCTGCTTCAGTATGCATTGGGTGTTCTGCACATTGTTACACTGGTACCTAACAGTCGCAAGATGATTGTAAATGCTACACTAAGCAATAATCGTGTTGGTATAGCAGTTATTTTGGATGCAGCTAATATTGCTAGCAGTCACGTGGACCCTGAGATCATTCAGCCTGCATTAAATGTGTTAGTCAATCTTGTTTGTCCTCCGCCTTCCATCAGCAATAAACCACCTTTAGTTACACAAGGTCAGCAGTCTGTTTCTGCCCAAACTACAAACGGTCCTCCTACAGACACTAGAGATAGGACTGCTGAACGTAGTATCTCAGATCGAACTGAACGTAGTATCTCAGATCGAACTGTTCACTCCTCCGGCCAGACTGATTCAAGGGAGCGAATTGGGGAATCTAGTCTAGTGGATCGAGGCAGTGCTGCAACCTCAGGATTAGTTGGAGACCGTAGGATATCTCTGGGTGCTGGAGCAGGTTGTGCTGGTCTTGCTGCCCAACTGGAACAAGGGTATCGTCAAGCTAGAGATGCTGTCCGTGCTAATAATGGAATAAAGGTCCTTCTGCATCTCCTTCAGCCACGTATATATTCACCTCCTGCTGCTCTGGATTGTCTTCGTGCTCTAGCATGTCGAGTCCTCCTTGGATTAGCTAGAGATGATACAATTGCACACATATTGACAAAGCTTCAGGTTGGGAAAAAGCTATCAGAACTAATTCGTGATTCAGGCAGCCAGACACATGGAACTGAGCAGGGCAGATGGCAAGCTGAACTTTCCCAGGCTGCAATTGAGCTAATTGGGATTGTGACCAATTCTGGACGTGCAAGTACATTAGCGGCTACTGATGCAGCTACTCCTACCTTAAGGCGCATAGAAAGAGCAGCTATAGCAGCTGCCACTCCTATTACTTACCATTCAAGGGAACTTTTACTTCTTATTCATGAACACCTACAGGCATCTGGGCTGTTCCAAACTGCTTCCTCGCTGCTTAAAGAGGCTCAGTTAACTCCTCTACCATCAGTGGTTGCTCCTTCATCTCTCGCACAACAAGCAACAACACAGGAAACTCCATTGGTACAACTTCAGTGGCCCTCTGGTCGTACTCCGTCTGGATTCCTAACtaacaaattaaagattaatgCAAGGGTTGAGGATGTTGGCATGAAGAGTGATGTAACTGCctcttctaagaaaaaaacactGACGTTCTCGTCTTCTTTTGGTTCACATCCTAGAAATCATCTTGTTGATTCTCAGCAGCCATCAGTCAAAAAAGGGTCAAGAACTGGGAAAGAGTCCTTCGAAACTGCAAGTGTGTCGGAGACTTTCTCGGAACCTTTGATGAAAAATGACAATGATACAACAGAATCTCAGTATAAGACTCCAATCATCTTGCCTATGAAGCGCAAATTATCTGATTTAAAGGATGTTGGCGTGTTTTCATCATCTGGAAAGCGACTAAATTTGGATCCAGGGCTTCGATCGCCTATTTATCCAACTCCTAACACAATCCGTAAAAGCTGCCTGCAGACTGATGCTTCTGGATTTTGTACACCAACTTCCAacataaaaaatcatcaaGGACAATGTACGGCTGACTCTGTGGATGACAGTCAATACAGTAGCTTAAATTCAGGTCAGGTGACAGCATCTTCCCAAATAACGAATGACTTCCAACCCAATAATCCAGAGCGTTTGACATTGGACTCTCTGGTAGTTCAGTATCTTAAGCATCAGCATCGCCAATGCCCTGCTCCTATTACCACTCTTCCTCCGCTATCTCTTCTACACCCACATGTTTGTCCTGAACCAAAACGAAGCCTTGATGCCCCATCCAATGTGGCAGCTCGGCTTGGTACAcgtgaatttaaatttatgtatggTGGAGTGCATGGAAATCGCAGGGATcgtcaatttatttatagcaGATTCAGGCCATGGCGCACTTGTCGGGATGACCCTGGGGCCCTCTTAACGTGCGTTACATTTCTTAGGGACTCTTCTCATATTGCTGTTGGGAGCCACAACGGAGAGCTCAAAGTGTTCGACTCCAACAGCAGCAATGTGGTGGAGACTTTTACAGGTCACCAGTCTCCTCTGACACTTATTCAGACTTTTGTGTCTGGTGAGACCCAGCTATTACTTTCTTCAAGCTCTCAAGAAGTGAGATCGTGGAACGGATCTCAAATTTCAATTGGTCCTACCCATTCGTTTGAAGGTTGCAAGGCTGCCAGGTTTAGCAACTGTGGAAATGTTTTTGCAGCTTTGTCGTCAGAATCTGCAAGACGAGAAATCCTCTTGTATGATATCCAAACTTGTCAGATAGAGTCAAAGCTGTCAGATACATTGGCAAATTCTTCAGGTCGGGGTCATATTTATTCCCTTATTCACTTTAGCCCCTCCGATTCAATGCTGCTTTGGAATGGAGTTTTATGGGATCGACGGGTTTCTGGACCCGTTCATCGGTTTGATCAGTTTACAGACTACGGGGGTGGAGGCTTTCATCCTGCTGGCAATGAGGTGATCATAAACTCCGAAGTCTGGGATCTGCGGAAGTTCAGACTGCTGCGCAGTGTACCTTCATTAGATCAAACATCAATAACATTTAATGCAGGCGGTGATGTGATTTATGCAATCCTAAGGAGAAATATCGAGGATGTAATGTCAGCGGTGCACACACGTCGAGTCAAGCATCATCTTTTTGCAGCTTTCCGCACTGTGGACGCAGTTAACTATTCAGACATTGCTACTATACCGGTGGATCGCTGTGTTCTTGATTTTGCAACTGAGCCAACAGATTCATTTGTTGGATTGATTACGATGGATGATCAAGATGAAATGTTTGCCTCAGCCAGGACCTATGAAATTGGACGTCGGAGGCCAACTGAAGATGATTCTGATCCGGATGATGCTGAAAGtgaagaggaagatgaagacGACGACGATGATGCTGATGTAGATCCTTTATTAGGCCCAGGTTTTGGTGGAGAAAGTGAGAGTGATGCAGATGATATGAGCAACGATGACGACGACGAGTATGATAGTGTGAGCGAGCTCGATGACGATGATGGAGATTTCTTAATGGATGATGTAGACTTCGATGGAGGAACTGGTGTGTTGGAGATTGTGACAGAAGGTGatgaggatgatgatgatagtCAAGTACTTGAATCTTTAAGTAGCGGTGAAGAGGATTTCATGGGTAATGGTTTTGGTTATTA 5867 0.4379 MEAAMDENSNQNQGQDQVPPPLPVAESQSQPQSLDGEEEDESKKEEEEFIAKAHKLMDKITSAPDNPKPTVLHALATILEKQELRYLEDNGYSSSSNARASHNVGRLGSLIRENDDFFELISSKFLSETRYSTSIQAAAARVLLSCSLTWIYPHVFEESVLENIKGWVMDENTRSSAEDQNLKCNLGRREGTDTEMLKTYATGLLAVCLAGGQVVEDVLTSGLSAKLMRYLRLRVLGEMSSNQKDAPLMESRHTSGTTSMRGRDESRGRLRQALESSHLDDTKMIVDKSLDDRTLERDQDRSISGQACKEDSWIDGEPPDGLEEGAGICEVDADGEDRWHNRDLRDGRIKFGDHDENAKDDSSKRRVNRGLVRSRGKGRASEGTVESEPVLLSPNSGGRLGQGRYVRDRSVSRSADVKRLPDPKKTLARITSDASVVEREDNDDCFQECRIGSKDISDLVRKAVRAAEAEARAASAPEEAVKAAGDAAAEIVKTTALEEFKSNNDDEAAFLAASRAASTVIDAASAIEVSRSLSSIKAETETASRETESSEDVEEYYIPDAESLAQLREKYCIQCLEILGEYVEVLGPVLHEKGVDVCLALLQQNSKHRDPPKVALLLPDIMKLICALAAHRKFAALFVDRGGMEKLLSVPRMAQTFFGLSSCLFTIGSLQGIMERVCALPSDVVYHVVELALQLLECSHDHARKNAALYFAAAFVFRAVLDAFDSQDGLQKLLALLNDAASVRSGVNSGALGLSNPGSLRNDRYPAEVLTSYEKQIAYHTCVALRQYFRAHLLLLVDSFRPNKSNRSAARNTSSVRAAYKPVDISNEAIEAVFLQLQKDRKLGPAFVRTRWPAVEKFLQYSGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPNSRKMIVNATLSNNRVGIAVILDAANIASSHVDPEIIQPALNVLVNLVCPPPSISNKPPLVTQGQQSVSAQTTNGPPTDTRDRTAERSISDRTERSISDRTVHSSGQTDSRERIGESSLVDRGSAATSGLVGDRRISLGAGAGCAGLAAQLEQGYRQARDAVRANNGIKVLLHLLQPRIYSPPAALDCLRALACRVLLGLARDDTIAHILTKLQVGKKLSELIRDSGSQTHGTEQGRWQAELSQAAIELIGIVTNSGRASTLAATDAATPTLRRIERAAIAAATPITYHSRELLLLIHEHLQASGLFQTASSLLKEAQLTPLPSVVAPSSLAQQATTQETPLVQLQWPSGRTPSGFLTNKLKINARVEDVGMKSDVTASSKKKTLTFSSSFGSHPRNHLVDSQQPSVKKGSRTGKESFETASVSETFSEPLMKNDNDTTESQYKTPIILPMKRKLSDLKDVGVFSSSGKRLNLDPGLRSPIYPTPNTIRKSCLQTDASGFCTPTSNIKNHQGQCTADSVDDSQYSSLNSGQVTASSQITNDFQPNNPERLTLDSLVVQYLKHQHRQCPAPITTLPPLSLLHPHVCPEPKRSLDAPSNVAARLGTREFKFMYGGVHGNRRDRQFIYSRFRPWRTCRDDPGALLTCVTFLRDSSHIAVGSHNGELKVFDSNSSNVVETFTGHQSPLTLIQTFVSGETQLLLSSSSQEVRSWNGSQISIGPTHSFEGCKAARFSNCGNVFAALSSESARREILLYDIQTCQIESKLSDTLANSSGRGHIYSLIHFSPSDSMLLWNGVLWDRRVSGPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSLDQTSITFNAGGDVIYAILRRNIEDVMSAVHTRRVKHHLFAAFRTVDAVNYSDIATIPVDRCVLDFATEPTDSFVGLITMDDQDEMFASARTYEIGRRRPTEDDSDPDDAESEEEDEDDDDDADVDPLLGPGFGGESESDADDMSNDDDDEYDSVSELDDDDGDFLMDDVDFDGGTGVLEIVTEGDEDDDDSQVLESLSSGEEDFMGNGFGY 1955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00302 1955 MobiDBLite consensus disorder prediction 348 368 - -
Bva10g00302 1955 SUPERFAMILY WD40 repeat-like 1528 1761 IPR036322 GO:0005515
Bva10g00302 1955 MobiDBLite consensus disorder prediction 1835 1955 - -
Bva10g00302 1955 ProSiteProfiles LIS1 homology (LisH) motif profile. 1187 1219 IPR006594 GO:0005515
Bva10g00302 1955 MobiDBLite consensus disorder prediction 1 47 - -
Bva10g00302 1955 Gene3D - 1526 1850 IPR015943 GO:0005515
Bva10g00302 1955 PANTHER BNAA03G51310D PROTEIN 38 1282 - -
Bva10g00302 1955 MobiDBLite consensus disorder prediction 1849 1869 - -
Bva10g00302 1955 MobiDBLite consensus disorder prediction 1 18 - -
Bva10g00302 1955 MobiDBLite consensus disorder prediction 1285 1323 - -
Bva10g00302 1955 PANTHER VPRBP PROTEIN-RELATED 1277 1835 IPR033270 GO:0016567
Bva10g00302 1955 MobiDBLite consensus disorder prediction 348 423 - -
Bva10g00302 1955 MobiDBLite consensus disorder prediction 1925 1940 - -
Bva10g00302 1955 MobiDBLite consensus disorder prediction 290 305 - -
Bva10g00302 1955 MobiDBLite consensus disorder prediction 1883 1912 - -
Bva10g00302 1955 SMART WD40_4 1613 1651 IPR001680 GO:0005515
Bva10g00302 1955 SMART WD40_4 1568 1608 IPR001680 GO:0005515
Bva10g00302 1955 SMART WD40_4 1525 1565 IPR001680 GO:0005515
Bva10g00302 1955 MobiDBLite consensus disorder prediction 978 1016 - -
Bva10g00302 1955 SMART Lish 1187 1219 IPR006594 GO:0005515
Bva10g00302 1955 PANTHER BNAA03G51310D PROTEIN 1277 1835 - -
Bva10g00302 1955 PANTHER VPRBP PROTEIN-RELATED 38 1282 IPR033270 GO:0016567
Bva10g00302 1955 MobiDBLite consensus disorder prediction 409 423 - -
Bva10g00302 1955 SUPERFAMILY ARM repeat 622 1127 IPR016024 -
Bva10g00302 1955 MobiDBLite consensus disorder prediction 954 1018 - -
Bva10g00302 1955 MobiDBLite consensus disorder prediction 956 977 - -
Bva10g00302 1955 MobiDBLite consensus disorder prediction 242 269 - -
Bva10g00302 1955 MobiDBLite consensus disorder prediction 290 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00302 Bva-Chr10 3813377 3822018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00302 1534 1758 U-box Gene Family AT2G33340 25.207 7.74e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00302 K11789 - gmx:100796030 2735.67