Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00290 ATGTTTTCCAGCAGCCAGTTTGACCCCAACTCCGCCTTCTCCGGCGGCGGTTTCATGTCCACTCAGACAACCCAGTTGAACGATTCATCCCCATCACCAGCAAAAAGCCGGGGAACTCAGGGTTTAGTTCCAGTAACAGTGAAGCAGATAAGCGAAGCCTCTCATTCTGGTGATGAAAAGTCGAACTTTATAATCAACGGTGCTGATGTGACCAATGTCACCCTGGTTGGTATGGTGTTTGAGAAAGCTGTAAGAAACACGGATGTTGGTTTCATTCTAGACGATGGAACAGGACGAATCAAATGTCGAAGATGGGTGAACGAGCCTTTTGATTCAAATGAAATGGAGGAAATACTTGATGGTATCTACGTTCGTGTTTATGGGCATTTGAAAAGCTTTGAAGGTGTAAGACAATTAGTTGCCTTCTCTGTCAGGCGGGTGACAAATTTTGATgagatttcttttcactttattgATTGCATACATAACAACCTCCAATCCAGATTAAAGGGAGAAGGAATTACTCCCCCTCATCTCACGTCATCAGACTCCTCTTTGAACACACCAGTGAAAAATGCATCAAATGAATATCAACTGCCATCATCGAATCCGTTATATGCACAATATAGCATGGATGTAGTCAAGGATTGTGATAAATTGGTTCTTGATTATCTACAGCAGCATTCAGATATGTCAGATGAAAGGGGAATACATGTTGATGAACTGTCTCGAGGGCTTAAACTTCCACTGGACAAGATCATGTTGTCTCTGAAGACTCTTGGAGATGATGGTTTGGTATACTCCACCATCGATGATTTCCACTACAAGCAAGCTTG 836 0.4187 MFSSSQFDPNSAFSGGGFMSTQTTQLNDSSPSPAKSRGTQGLVPVTVKQISEASHSGDEKSNFIINGADVTNVTLVGMVFEKAVRNTDVGFILDDGTGRIKCRRWVNEPFDSNEMEEILDGIYVRVYGHLKSFEGVRQLVAFSVRRVTNFDEISFHFIDCIHNNLQSRLKGEGITPPHLTSSDSSLNTPVKNASNEYQLPSSNPLYAQYSMDVVKDCDKLVLDYLQQHSDMSDERGIHVDELSRGLKLPLDKIMLSLKTLGDDGLVYSTIDDFHYKQA 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00290 278 MobiDBLite consensus disorder prediction 1 41 - -
Bva10g00290 278 Pfam Replication protein A C terminal 190 272 IPR014892 -
Bva10g00290 278 SUPERFAMILY "Winged helix" DNA-binding domain 213 276 IPR036390 -
Bva10g00290 278 SUPERFAMILY Nucleic acid-binding proteins 42 165 IPR012340 -
Bva10g00290 278 CDD RPA2_DBD_D 72 165 - -
Bva10g00290 278 PANTHER REPLICATION PROTEIN A 32 KDA SUBUNIT A 1 278 - -
Bva10g00290 278 Gene3D - 209 278 IPR036388 -
Bva10g00290 278 PIRSF RPA32 1 278 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Bva10g00290 278 Gene3D - 34 168 IPR012340 -
Bva10g00290 278 PANTHER REPLICATION PROTEIN A-RELATED 1 278 IPR040260 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00290 Bva-Chr10 3753755 3757073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00290 1 276 Core DNA Replication Machinery Family AT2G24490 48.936 1.68e-90 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00290 K10739 - gmx:100802512 414.846