Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00283 ATGGGCGGCGATAAGGCTATCAGCCTCGAGGAGatcaaaaatgaaaacgtCGATTTGGAACGGATCCCGGTTGAGGAAGTGTTTGAGCAGCTGAAATGTTCAAAGGAAGGTTTAACATCCGAAGAAGGAGCCAATCGGCTTCAAGTGTTTGGACCAAACAAATTGGAAGAGAAGAAGGAgagcaaaattttgaagtttttgggTTTTATGTGGAACCCGTTGTCCTGGGTCATGGAAGCTGCTGCTATAATGGCTATTGCTTTGGCAAATGGCGGTGGACGGCCCCCAGACTGGCAAGATTTCGTGGGTATCATTTCTCTACTTGTGATCAACTCTACAATCAGTTTTATAGAGGAAAACAATGCTGGCAATGCTGCGGCAGCACTTATGGCTGGTTTAGCTCCCAAGACCAAGGTTCTTAGAGATGGCCGATGGAGTGAACAAGATGCTGCAATTTTAGTTCCAGGAGACATAATCAGCATTAAGTTAGGAGATATTATACCTGCTGATGCTCGTCTTCTTGAGGGTGATCCTTTAAGCGTTGATCAATCCGCTCTAACTGGAGAGTCCCTTCCTGTGACGAAGAGTTCGTCAGATGAAGTGTTTTCTGGGTCAACTGTCAAAAAGGGTGAAATAGAAGCAGTTGTGATTGCTACTGGTGTGCACACCTTTTTTGGCAAAGCTGCGCATCTAGTGGACAGCACCAATCAAGTTGGGCACTTCCAGAAAGTTCTAACAGCAATTGGTAATTTCTGCATTTGCTCAATTGCCGTCGGAATAGCCGTTGAGATAATTGTCATGTACCCGATACAACATCGCAAGTACAGAGATGGAATTGACAATCTTTTGGTTCTCTTGATTGGAGGAATTCCAATTGCCATGCCAACTGTTTTGTCTGTCACTATGGCTATTGGTTCTCACAGGCTTTCTCAGCAAGGTGCAATTACAAAGAGAATGACAGCTATTGAGGAAATGGCAGGGATGGATGTTCTCTGTAGTGACAAAACTGGAACTCTTACCCTTAACAAATTATCTGTTGATAGAACCTTGATCGAAGTTTTTACTAAGGGTGTTGAAAAGGAGCATCTAATCCTTCTTGCGGCAAGGGCTTCTAGGACTGAGAATCAGGATGCCATAGATGCTGCAATTGTTGGGATGCTTGCTGATCCAAAGGAGGCACGAGCTGGTATCAGGGAGGtgcattttttccccttcaatCCTGTAGACAAGAGGACCGCTCTAACCTACATTGATTCCGATGGAAGCTGGCATCGAGCTAGTAAAGGTGCTCCTGAGCAGATTTTGAATCTTTGCAATTGCAAAGAGGATGTTAGGAGAAAAGCTCATGCtgttattgataaatttgctGAGCGTGGACTCCGTTCTTTGGGTGTTGCAAGACAGGAAGTACCCGAGAAATCAAAAGATGCACCAGGCGCACCATGGCAATTTCTTGGTCTGCTACCTCTGTTTGATCCCCCTAGGCATGATAGTGCTGAAACCATCAGAAGAGCTCTTCACCTTGGTGTGAATGTTAAGATGATTACTGGCGATCAGCTTGCAATTGGCAAGGAAACTGGCCGAAGGCTAGGGATGGGGACGAACATGTACCCATCTTCTTCATTGCTTGGCCAAGGACAAGACAAGGATGCTTCTATTTCAGCTCTTCCTGTTGACGAGTTGATCGAGAAGGCTGACGGATTTGCAGGAGTGTTTCCCGAACACAAATATGAAATCGTTAAGAGGCTGCAAGAGAGGAAGCATATCTGTGGAATGACAGGAGATGGTGTCAATGATGCCCCTGCATTAAAGAAAGCAGATATTGGAATTGCTGTTGCTGATGCTACAGATGCTGCTAGAAGTGCTTCTGATATTGTCCTCACTGAACCTGGGTTGAGTGTCATTATTAGTGCAGTGCTTACTAGCCGGGCTATTTTCCAGAGGATGAAGAACTACACTATATATGCTGTATCAATCACTATTCGTATTGTGTTTGGTTTCCTCTTTATCGCGTTGATCTGGAAGTTTGACTTTGCGCCCTTCATGGTTCTGATTATTGCCATACTAAATGATGgtACCATTATGACGATATCCAAGGATCGAGTGAAACCATCTCCACAGCCAGACAGCTGGAAACTGAAGGAGATATTTGCTACTGGCGTTGTGCTTGGTACTTACATGGCATTAATGacagtaatatttttttgggttatgaATGACACTGACTTCTTCCcgGACAAGTTTAATGTGAGGAAAATAAGGGATAACGAGCATGAAATGATGGCAGCGTTATACCTACAAGTCAGTATTATAAGCCAggctttaatttttgttacaaGGTCCCGCAGCTGGTCCTATGTTGAGAGACCTGGACTTCTCCTACTGAGTGCTTTTATGATTGCTCAGCTGGTGGCAACTCTGATAGCAGTGTATGCTAACTGGGGCTTCGCACGGATAAAGGGAATGGGATGGGGTTGGGCTGGAGTAATATGGCTCTACAGTATAGTGACATATATCCCTCTTGATTTACTCAAGTTTGCAATCCGCTATGTTCTGAGTGGGAAGGCATGGGATAATCTTTTGGAGAACAAGACTGCCTTCACCACAAAGAAAGATTATggcaaagaagagagagaagcacAATGGGCGGCTGCACAAAGGACTCTTCATGGTCTTCAGCCACCAGAAACCACCAACCTTTTCAATGACAAGAGTAGCTACAGGGAACTTTCAGAGATTGCAGAGCAAGCCAAGCGTCGTGCTGAGGTTGCAAGGCTTAGGGAGCTACATACTCTGAAGGGACATGTTGAATCCGTGGTGAAGCTGAAGGGGCTTGACATTGATACAATTCAGCAGCATTATACAGTATA 2870 0.4293 MGGDKAISLEEIKNENVDLERIPVEEVFEQLKCSKEGLTSEEGANRLQVFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIISLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLSVDQSALTGESLPVTKSSSDEVFSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIAVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRTLIEVFTKGVEKEHLILLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGSWHRASKGAPEQILNLCNCKEDVRRKAHAVIDKFAERGLRSLGVARQEVPEKSKDAPGAPWQFLGLLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQGQDKDASISALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFLFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGTYMALMTVIFFWVMNDTDFFPDKFNVRKIRDNEHEMMAALYLQVSIISQALIFVTRSRSWSYVERPGLLLLSAFMIAQLVATLIAVYANWGFARIKGMGWGWAGVIWLYSIVTYIPLDLLKFAIRYVLSGKAWDNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETTNLFNDKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00283 956 CDD P-type_ATPase_H 37 846 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bva10g00283 956 SFLD C1.7: P-type atpase like 314 644 - -
Bva10g00283 956 PRINTS P-type cation-transporting ATPase superfamily signature 182 196 - -
Bva10g00283 956 PRINTS P-type cation-transporting ATPase superfamily signature 508 518 - -
Bva10g00283 956 PRINTS P-type cation-transporting ATPase superfamily signature 593 612 - -
Bva10g00283 956 PRINTS P-type cation-transporting ATPase superfamily signature 616 628 - -
Bva10g00283 956 PRINTS P-type cation-transporting ATPase superfamily signature 486 497 - -
Bva10g00283 956 PRINTS P-type cation-transporting ATPase superfamily signature 332 346 - -
Bva10g00283 956 PANTHER CALCIUM-TRANSPORTING ATPASE 6 936 - -
Bva10g00283 956 Gene3D - 905 956 - -
Bva10g00283 956 PRINTS H+-transporting ATPase (proton pump) signature 593 609 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva10g00283 956 PRINTS H+-transporting ATPase (proton pump) signature 624 649 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva10g00283 956 PRINTS H+-transporting ATPase (proton pump) signature 765 786 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva10g00283 956 PRINTS H+-transporting ATPase (proton pump) signature 448 466 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva10g00283 956 PRINTS H+-transporting ATPase (proton pump) signature 565 581 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva10g00283 956 SUPERFAMILY Calcium ATPase, transduction domain A 135 232 IPR008250 -
Bva10g00283 956 ProSitePatterns E1-E2 ATPases phosphorylation site. 334 340 IPR018303 -
Bva10g00283 956 SMART Cation_ATPase_N_a_2 18 90 IPR004014 -
Bva10g00283 956 Pfam Cation transporter/ATPase, N-terminus 22 84 IPR004014 -
Bva10g00283 956 Coils Coil 907 927 - -
Bva10g00283 956 Gene3D - 135 219 - -
Bva10g00283 956 SFLD p-type atpase 314 644 IPR044492 -
Bva10g00283 956 Gene3D - 344 491 IPR023299 GO:0000166
Bva10g00283 956 SUPERFAMILY Calcium ATPase, transmembrane domain M 17 852 IPR023298 -
Bva10g00283 956 Pfam haloacid dehalogenase-like hydrolase 328 607 - -
Bva10g00283 956 Gene3D - 329 630 IPR023214 -
Bva10g00283 956 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 37 811 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bva10g00283 956 PANTHER PLASMA MEMBRANE ATPASE 6 936 - -
Bva10g00283 956 SUPERFAMILY HAD-like 328 640 IPR036412 -
Bva10g00283 956 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 568 683 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva10g00283 956 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 104 351 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva10g00283 956 Gene3D - 97 820 - -
Bva10g00283 956 Pfam E1-E2 ATPase 134 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00283 Bva-Chr10 3713263 3719668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00283 8 956 Primary Pumps ATPases AT3G42640 84.194 0.0 1628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00283 K01535 - gmx:100791692 1726.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00283 10 3713263 3719668 Bva06g02484 06 15789460 15796791 BWGD