Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00269 ATGGCTGTGGAGCTCCTGAGTTTCCCTAAAATGGACGAGCAGAAGGCTATACAGGAGGCCGCATCAGAAGGATTGAAGGGCATGGAGCACATGATCCGGCTCCTCTCGCATCAATCCAACCAAATGGACTGCGCAGACCTCACCGATGTCACCGTTTCTAAGTTCAAAAAACTTATTTCCCTATTAAACCGGACCGGCCGTGCCCGGTTCAGGCGAGGGCCTGTTCACTCCTCTCCTTCTACTTCTACATCACCGCCTCCATCATCCGCATCTGCACCGGCGGCCTCCGCCTTTCTTTCTCAATCGCAAAATTTGAATCTATCTCCAGTGCAGTTCAATTCACCTGCGACCGTGTCTCCGGCGCCGATCGTAAATCCAGGAACCGTTCATCATGCTCCGATCAATACTCCCTCAAGTTTCGTTCCCACTCTGTCGCAGAGTTTGACTCTTGATTTTACTAAATCAAATATCTTGAGTTCGAACACAAAGTCCCTGGAACTGGAGTTCTCCAAAGAGACATTTAGTGTGTCCTCAAACTCATCGTTCATGTCGTCGGCCATCACCGGCGACGGTAGCGTTTCTAACGGTAAACAAGGATCATCGCTCTTTTTGACTCCGGCGGCACCGACAGTGTCCGGTGGGAAGCCACCTCTGTCAGCACCTTCGTTCAAGAAGAGGTGTTACGACCACCGCGAGCACTCAGACGACATTTCCGGCAAACTCTCGGGTTCTAGCAAGTGCCACTGCATCAAGAGAAGgAAAAATCGGGTTAAGAAAACAATTAGAGTTCCGGCGATTAGTTCGAAGATCGCTGATATTCCGCCCGACGAGTACTCATGGCGCAAGTACGGTCAGAAGCCGATCAAGGGGTCGCCATATCCACGGGGCTATTACAAATGCAGTACGGTGAGAGGATGCCCAGCGAGGAAACACGTGGAGAGGGCCCCCGATGAACCGACGATGCTGATTGTAACGTACGAGGGAGAGCACCGTCACGCGATTCAGGATAACCCAACCGGGAGTGTGGGTTTGGTATTCGAGTCAACGTG 1049 0.5186 MAVELLSFPKMDEQKAIQEAASEGLKGMEHMIRLLSHQSNQMDCADLTDVTVSKFKKLISLLNRTGRARFRRGPVHSSPSTSTSPPPSSASAPAASAFLSQSQNLNLSPVQFNSPATVSPAPIVNPGTVHHAPINTPSSFVPTLSQSLTLDFTKSNILSSNTKSLELEFSKETFSVSSNSSFMSSAITGDGSVSNGKQGSSLFLTPAAPTVSGGKPPLSAPSFKKRCYDHREHSDDISGKLSGSSKCHCIKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAPDEPTMLIVTYEGEHRHAIQDNPTGSVGLVFEST 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00269 349 MobiDBLite consensus disorder prediction 70 96 - -
Bva10g00269 349 PANTHER WRKY PROTEIN 10 346 - -
Bva10g00269 349 Pfam WRKY DNA -binding domain 276 332 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva10g00269 349 MobiDBLite consensus disorder prediction 198 218 - -
Bva10g00269 349 Gene3D WRKY domain 262 334 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva10g00269 349 MobiDBLite consensus disorder prediction 75 96 - -
Bva10g00269 349 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 10 346 IPR044810 GO:0003700
Bva10g00269 349 SMART WRKY_cls 274 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva10g00269 349 Pfam Plant zinc cluster domain 224 272 IPR018872 -
Bva10g00269 349 ProSiteProfiles WRKY domain profile. 269 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva10g00269 349 SUPERFAMILY WRKY DNA-binding domain 272 334 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00269 Bva-Chr10 3662971 3664706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00269 1 348 WRKY Transcription Factor Family AT2G24570 57.923 1.12e-120 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva10g00269 WRKY 2.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00269 - - tcc:18587637 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00269 10 3662971 3664706 Bva10g00269 10 3662971 3664706 ECH