Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00257 ATGTGGTTGCCAAGGAATCAAGGGGATAGAAAGGATGGTGTGAATGGATTAGTGGCAGTGGCAATAGACAAAGACAAGGGAAGCCAGAATGCACTCAAATGGGCCATTGACCATCTCCTCATGAGAGGCTCAACAGTGATTCTCCTCCATGTGAAGATTAAGGCTATTACCTCATCGGCTTCTCTTCAAATCCCTAGGATGGGCGATGAGAGTACATTGGTATGCAAAGATCCTGATTCTCAATCCAGAGAAATTTTCCTCCCATTTCGTGTCTTCTGTACACGGAAAGATATACAATGCAAGGATGTCATACTAGAAGATATAGATGTATGCAAAGCTTTGATAGAGTATTCTTCTCAGTCTGCAATTGAGCATTTGGTTCTTGGTTCTTCACCGAAAACTGGTTTACTTAGGAGATTTAAGGTGGCAGATATACCTGGAACCGTGGCAAAAGGGGCACCAGATTTCACTACTGTTTATGTTGTTTCTAAAGGAAAGATTCAATCAATGCGATCTGCATCTCGTCCTGCTCCAGCCATTTCTCCTCTGCGCAGCCAGCTTAATCAAGCGAACACGAGGACAGATGCACCAGAGCAACAGGTGGCAGTGAGTAATAATGTGAAAGTTCTTGAAAGGAGATCCTTTGATGGAGGACTACGTAGATCCTCTGACGAAACAGAAAACTTCAGGTCCCCATTCACCGCAAGGAAAGGTCCAAATGGCAAGTCATACGGGGAACTTTCCCTTCCAGATACTGATATATCCTTCGTAAGCAGTGGAAGGCCAAGTACAGATCGCTTGTTCCCTTCACTTTATGATAACTCAGATTCAGGGTTTTCCAACCCTCGGATATCATATAGCGCAGATATGGATGGAAATTATAGCTTTGAGGCAATGCAATATGCAAGGAAGTCTGTGGATGGAAGGCGGTCTTTGGATATCAGTTCTCCTTCTGAATTCTCTTCAATCTCACAAGAAAGTGAcagactttctttttctacatcATCACAGGCTGTGGATGATGTGGAGGCTGAAATGCGGAGACTAAAGCTGGAGCTTAAGCAAACAATGGAAATGTATAGTACAGCTTGTAAAGAAGCACTGACAGCGAAGCAGAAGGCAGTAGAACTCCAGCGttggaaaatggaagaagagcGGAGACTGGAAGAGGCTAGGTTTGCTGAGGAAGCTGCATTGGCGATggtagaaaaagagaaggccAAATCCAGAGTAGCCATGGAGGCTGCTGAAGCACAGAGGAGAATTGCCGAACTAGAAGCAAAGAAGAGACTCAGTGTGGAAATGAAAACACTTAAAGAATCAGAAGAGAAAGGAGACGCAATGGACGATTTGGTTATAGATGTCAGGTATAGAAGGTATTCAATCGAGGAGATTGAAGCTGCAACAGAGTTCTTTGCAGAGTCTCTGAAGATTGGAGAAGGAGGGTACGGTCCAGTATATAAGTGCCTTCTGGACCATACACCTGTTGCAGTGAAGGTTCTTCGACCTGATGCAGCACAAGGAAGGTCACAGTTTAACCGAGAAATTGAGGTATTGAGCTGCATAAGGCATCCAAACATGGTTCTACTCCTTGGAGCCTGCCCAGAATATGGTTGCCTTGTTTATGAGTTTATGGCCAATGGAAGCTTGGATGATTGTCTCTTTCGGCATGGAAACACTCCGTCACTTCCTTGGCAGCTAAGGTTCAAAATTGCAGCTGAAATTGGCACTGGCTTGCTGTTCCTCCACCAGACAAAACCAGAGCCACTGGTCCACAGGGACTTGAAACCAGCTAACATCTTGCTTGACCGCAACTATGTAGCCAAGATCAGCGATGTTGGTTTGGCGAGGTTAGTTCCACCGTCTGTGGCCGACAGTGTGACACAATATAGGATGACCTCAACTGCTGGAACTTTCTGCTATATTGATCCAGAGTATCAGCAGACAGGAATGCTAGGGGTAAAGTCTGACATATATTCCCTCGGGATCATTTTCCTGCAAATATTGACAGCAAGACCACCAATGGGTTTGACCCATCATGTTGAAAGAGCCATTGAGAAGGGAACGTTTACTGAGATGCTGGATCCAACAGTACCTGATTGGCCAGTAGAGGATGCAATGGGCCTTGCAAAGATGGCACTTCAGTGTGCTGAGTTGAGGCGGAAAGACAGACCTGATCTCGCTAAGGTTATCTTACCTGAACTAAATAGATTAAGATCACTTGCTGAAGATACAGTTCAAGATTTTATGAGAATTGGCTTTGTAAGTCCATACAGCCAGAGCCAAGTTTCTGTGACGCTGGACGAAGTTCCACATTATAGTGAGAGCACAAGAAACGCATCCAGCCCTTTTgtcta 2357 0.4383 MWLPRNQGDRKDGVNGLVAVAIDKDKGSQNALKWAIDHLLMRGSTVILLHVKIKAITSSASLQIPRMGDESTLVCKDPDSQSREIFLPFRVFCTRKDIQCKDVILEDIDVCKALIEYSSQSAIEHLVLGSSPKTGLLRRFKVADIPGTVAKGAPDFTTVYVVSKGKIQSMRSASRPAPAISPLRSQLNQANTRTDAPEQQVAVSNNVKVLERRSFDGGLRRSSDETENFRSPFTARKGPNGKSYGELSLPDTDISFVSSGRPSTDRLFPSLYDNSDSGFSNPRISYSADMDGNYSFEAMQYARKSVDGRRSLDISSPSEFSSISQESDRLSFSTSSQAVDDVEAEMRRLKLELKQTMEMYSTACKEALTAKQKAVELQRWKMEEERRLEEARFAEEAALAMVEKEKAKSRVAMEAAEAQRRIAELEAKKRLSVEMKTLKESEEKGDAMDDLVIDVRYRRYSIEEIEAATEFFAESLKIGEGGYGPVYKCLLDHTPVAVKVLRPDAAQGRSQFNREIEVLSCIRHPNMVLLLGACPEYGCLVYEFMANGSLDDCLFRHGNTPSLPWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVADSVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTARPPMGLTHHVERAIEKGTFTEMLDPTVPDWPVEDAMGLAKMALQCAELRRKDRPDLAKVILPELNRLRSLAEDTVQDFMRIGFVSPYSQSQVSVTLDEVPHYSESTRNASSPFV 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00257 785 SUPERFAMILY Protein kinase-like (PK-like) 452 731 IPR011009 -
Bva10g00257 785 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 140 - -
Bva10g00257 785 ProSiteProfiles Protein kinase domain profile. 472 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00257 785 MobiDBLite consensus disorder prediction 214 231 - -
Bva10g00257 785 Coils Coil 339 359 - -
Bva10g00257 785 Pfam Protein kinase domain 475 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00257 785 Coils Coil 399 435 - -
Bva10g00257 785 Gene3D Phosphorylase Kinase; domain 1 453 544 - -
Bva10g00257 785 MobiDBLite consensus disorder prediction 214 249 - -
Bva10g00257 785 Gene3D HUPs 18 154 IPR014729 -
Bva10g00257 785 ProSitePatterns Serine/Threonine protein kinases active-site signature. 590 602 IPR008271 GO:0004672|GO:0006468
Bva10g00257 785 CDD STK_N 17 165 - -
Bva10g00257 785 PANTHER OS02G0152300 PROTEIN 11 772 - -
Bva10g00257 785 SMART serkin_6 472 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00257 785 Gene3D Transferase(Phosphotransferase) domain 1 545 752 - -
Bva10g00257 785 Pfam Universal stress protein family 18 140 IPR006016 -
Bva10g00257 785 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 11 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00257 Bva-Chr10 3603683 3603949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00257 1 765 Receptor kinase-like Gene Family AT1G78940 56.594 0.0 793
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Bva10g00257 Pkinase 2.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00257 - - gmx:100803461 1071.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00257 10 3603683 3603949 Bva10g00257 10 3603683 3603949 ECH