Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00241 ATGGAGCCAAAACACGCCGGCCTCCTGGCGGCATGCCCTGCCACTCAATCTCTGGCCGTTTCGATGTTCTCCGCCGGCGGAGGCGACTTCAAACGGATTGCGTCGGAGTTGGATCTCGACGAGTTCCTGAAGAAGACGGTGATCGGTGCTGGAATAACCAGTGGATCAGCCAACGACGAGGACGTGAAACCGTGCGACTTCCGGTACCAGAGAGAGGAAGCCTTCGCCGAGATGGATGCATTTTTAAGCGGCGATGGCCTTAAGGATGCTTTCAATAGAAATCCGGATACTGTGACTGTATTTTCAACTTGTGGTGGAAACACAGATAGGAATACCATTCTCTGGCCCCAAAACGTGACTCCGAAGCATTCTGGCGTGTCTGCTACTATTGATTCTCAGTCATCGCTCTGTGGTACTACTGGTAATGCTCTGGGCAACATCCATGTTGGGAGCCCAGTGTCTGCAAATCAACCAATCCTCAGAGACAATCAAGTAAAAGGAACTTCAAGTGGTTCCTCACAGtctgatgaagatgatgaagctGGTCCTTGTGAACAGAGCACAAATCCTACTGATATGAAGCGCCTTAGAagGAAGGTTTCTAATCGGGAGTCTGCGAGGagatcaagaagaagaaaacaagcaCATTTGACTGACCTTGAGTTGCAGGCTGAGCAGCTGAGAGTGGAAAATGCAGCCCTTTACAAGCAGCTCACAGATGCCAGCCAACAATATCGCGATGCTGATACAAATAATCGAGTGCTGAAATCAGATGTTGAAGCTCTAAGGGCTAAGGTGAAGTTAGCTGAAGATATGGTCGCCCGGGGATCCTTAAACAACTTAAATCAGCAGCTTTATCAGGCCAACTTAAGCACAACACCGCAATTCAACACTAACATGCGTCGCATGGCACACGTCTCCCCAACAGTCACAGTCCAAGGAAATGATGCCTCATATGCTGGTATAAATGTTGGTGGACACAACTCATCTATTGGAATTGGAAACTTAGATATTAGTAACAACAGTTTCAACAATGGAGTCATAAGTGATACTGTGAGTTGTGTGACTGATATCTGGCCATA 1082 0.4603 MEPKHAGLLAACPATQSLAVSMFSAGGGDFKRIASELDLDEFLKKTVIGAGITSGSANDEDVKPCDFRYQREEAFAEMDAFLSGDGLKDAFNRNPDTVTVFSTCGGNTDRNTILWPQNVTPKHSGVSATIDSQSSLCGTTGNALGNIHVGSPVSANQPILRDNQVKGTSSGSSQSDEDDEAGPCEQSTNPTDMKRLRRKVSNRESARRSRRRKQAHLTDLELQAEQLRVENAALYKQLTDASQQYRDADTNNRVLKSDVEALRAKVKLAEDMVARGSLNNLNQQLYQANLSTTPQFNTNMRRMAHVSPTVTVQGNDASYAGINVGGHNSSIGIGNLDISNNSFNNGVISDTVSCVTDIWP 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00241 360 Coils Coil 210 272 - -
Bva10g00241 360 MobiDBLite consensus disorder prediction 163 177 - -
Bva10g00241 360 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 192 244 IPR004827 GO:0003700|GO:0006355
Bva10g00241 360 Pfam bZIP transcription factor 193 245 IPR004827 GO:0003700|GO:0006355
Bva10g00241 360 PANTHER BASIC LEUCINE ZIPPER 63 29 360 - -
Bva10g00241 360 SMART brlzneu 190 254 IPR004827 GO:0003700|GO:0006355
Bva10g00241 360 CDD bZIP_plant_GBF1 195 246 IPR045314 GO:0003700|GO:0006355
Bva10g00241 360 SUPERFAMILY Leucine zipper domain 194 245 IPR046347 GO:0003700|GO:0006355
Bva10g00241 360 MobiDBLite consensus disorder prediction 163 217 - -
Bva10g00241 360 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 197 212 IPR004827 GO:0003700|GO:0006355
Bva10g00241 360 Gene3D - 193 249 - -
Bva10g00241 360 PANTHER BASIC LEUCINE ZIPPER 9 29 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00241 Bva-Chr10 3538062 3541219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00241 110 360 bZIP Transcription Factor Family AT5G24800 46.875 5.27e-67 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva10g00241 bZIP_1 1.9e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00241 K25784 - gmx:778193 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02513 06 15930499 15933019 Bva10g00241 10 3538062 3541219 BWGD
Bva10g00241 10 3538062 3541219 Bva10g00241 10 3538062 3541219 ECH