Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00237 ATGCAAAAGGAGAAGGAAGGAATTAGCAAAGAGGTAGGGGCGGATATGGAAGGTGGGATCCGTTCAAAGGAGGAAAACTTGCCGCCGGGATTTCGATTTCATCCAACCGATGAAGAACTCATCACTTACTATCTCATCAACAAGATATCAAATGCCAATTTTACAGGAAGAGCTGTAACTGATGTAGATCTCAACAAATGTGAGCCATGGGAGCTCCCAGGGAAGGCAAAGatgggagaaaaagaatggTACTTCTTCAGTCTTAGAGATCGGAAGTACCCAACGGGGGTGAGAACAAACAGAGCAACAAACACTGGGTACTGGAAAACCACAGGAAAAGACAAAGAGATCTTTAACAGTGCTACATCAGAATTGGTGGGAATGAAGAAGACTTTGGTTTTCTACAAAGGCAGAGCTCCAAGAGGAGAGAAAAGCAACTGGGTCATGCATGAATATCGCATTCACGCAAAATCCAGCCTCCGAGCTAACAAGCAGGATGAATGGGTGGTTTGCCGGGTGTTCCAGAAGAGTGCTGGTGCAAAAAAGTACCCTTCCATTAACCATACAAGAGCTGTGAATCCTTATAGCCTAGAAATAGGTCCTAGCATGGTTCCACCACCAATGATGCAGCTGGGAGATCCTGTGGGAGGTCATTTCCTCTACGGAAGAAACTACATGAGTAGTGCAGCAGAGTTAGCAGAGGTTGCCAGGGTTTTGAGAGCTGGTGGATCAACCAGTGTTAACCTACCCATGCAATCCCAGTTGAACTACCCAGTAACAGGAGGATGTTTCACAATATCTGGGTTAAATTTGAATCTGGGAGGAGGAGGAGCTGCAGCACAACCAGTTTTGCGGCCAATGCCGACACCGGCGCCACCTCAGGCAGCTCCTCAGGCGCATGCAATGAGTCAATTGCACGATGTCAGTTCTAACATGATGACAGCTTCTACTCTTGCTTCAGCTGAGAACTTAGGGTATGGTACGGAAATGAGCAATGCAAATAACCCTCCCGGCAATAGGTATATGGGCATGGACAATTGTATGGATCTCGATAACTACTGGCCTTCCTACTG 1073 0.4613 MQKEKEGISKEVGADMEGGIRSKEENLPPGFRFHPTDEELITYYLINKISNANFTGRAVTDVDLNKCEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSATSELVGMKKTLVFYKGRAPRGEKSNWVMHEYRIHAKSSLRANKQDEWVVCRVFQKSAGAKKYPSINHTRAVNPYSLEIGPSMVPPPMMQLGDPVGGHFLYGRNYMSSAAELAEVARVLRAGGSTSVNLPMQSQLNYPVTGGCFTISGLNLNLGGGGAAAQPVLRPMPTPAPPQAAPQAHAMSQLHDVSSNMMTASTLASAENLGYGTEMSNANNPPGNRYMGMDNCMDLDNYWPSY 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00237 357 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 12 354 - -
Bva10g00237 357 SUPERFAMILY NAC domain 23 176 IPR036093 GO:0003677|GO:0006355
Bva10g00237 357 Gene3D NAC domain 36 180 IPR036093 GO:0003677|GO:0006355
Bva10g00237 357 MobiDBLite consensus disorder prediction 1 31 - -
Bva10g00237 357 Pfam No apical meristem (NAM) protein 28 154 IPR003441 GO:0003677|GO:0006355
Bva10g00237 357 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 354 - -
Bva10g00237 357 ProSiteProfiles NAC domain profile. 27 176 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00237 Bva-Chr10 3511122 3513533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00237 21 357 NAC Transcription Factor Family AT2G24430 53.073 7.39e-119 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva10g00237 NAM 2e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00237 - - gmx:100804931 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00237 10 3511122 3513533 Bva10g00237 10 3511122 3513533 ECH