Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00232 ATGGCAGCTGTTGAAATCAAAAATATGGAAAGAGAACGAACACGGAAACGGCCTCGTCTAGCGTGGGACGTACCCCCGGAGCCAGAGGCGCAGAGGGCTCTGCCGGTGGGTGATGACGGATTGAGAAAAAGGCTTGCATCTCCTCCGAAAAGGGATGACGATCGTGATGGACATTATGTTTTTAATCTCGGCGAAAATCTCACTCCAAGATATAAAATCATCAGCAAGATGGGTGAAGGCACATTTGGTCGAGTTTTGGAATGTTGGGACCGTCAAACCCGAGATTACGTGGCTGTTAAGGTAGTCagaagcataaaaaaataccGTGATGCAGCAATGATTGAAGTTGATGTGCTTCGGCATCTGGCTAAGAATGATGTAGGCAGCTCACGCTGTGTGCAGTTTCGGAGCTGGTTTGATTATAGGAATCACATATGTATTGTATTTGAGAAGCTTGGACCAAgcttatttgattttctaaagagaaataaatactGCCCCTTCCCTGTGGATCTTGTTCGTGAATTTGGACGCCAGCTTTTGGAATCTGTAGCATATATGCATGATTTACACCTAATCCACACTGACCTGAAGCCAGAAAATATACTTCTCGTTTCCCCTGAATATGTAAAGCTCCCTAAAAATAAGAGGGTTTTCTCAGATGAAACAGAATTCAGGTGCTTGCCCAAGTCTAGTGCTATTAAGCTGATTGATTTTGGTAGTACTGCATTTGATAATCAGAATCATAGCTCCACTGTTTCTACAAGGCATTACCGGGCCCCTGAGATTATTCTAGGTTTGGGGTGGACTTATCCGTGTGATTTATGGAGTGTTGGTTGTATCCTGATCGAACTTTGCACGGGTGAAGCACTGTTTCAGACTCATGAAAACTTGGAGCACTTGGCGATGATGGAGAGGGTGTTGGGACTTTTACCGGAGTACATGGTTAGAAGAGCTAACCGAGGtgcagaaaaatatttcaggCGAGGTTGTCGACTAAATTGGCCCGAAGGAGCTATTTCAAGAGAGAGTATTAGAGCAGTAAAGAAGCTCGATTGTCTGAAGGATCTTGTATCACGACGCGTTGAGCACTCGAGTTCCGCTTTTACTGACTTGTTACATGGTTTAATGAAATACGATCCTACTAAACGTCTAACGGCTCGACAAGCCCTTGATCATCCCTTCTTCACCAGTCCAACTTA 1202 0.4268 MAAVEIKNMERERTRKRPRLAWDVPPEPEAQRALPVGDDGLRKRLASPPKRDDDRDGHYVFNLGENLTPRYKIISKMGEGTFGRVLECWDRQTRDYVAVKVVRSIKKYRDAAMIEVDVLRHLAKNDVGSSRCVQFRSWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLHLIHTDLKPENILLVSPEYVKLPKNKRVFSDETEFRCLPKSSAIKLIDFGSTAFDNQNHSSTVSTRHYRAPEIILGLGWTYPCDLWSVGCILIELCTGEALFQTHENLEHLAMMERVLGLLPEYMVRRANRGAEKYFRRGCRLNWPEGAISRESIRAVKKLDCLKDLVSRRVEHSSSAFTDLLHGLMKYDPTKRLTARQALDHPFFTSPT 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00232 400 CDD PKc_CLK 58 396 - -
Bva10g00232 400 PANTHER BNAA07G37640D PROTEIN 44 397 - -
Bva10g00232 400 Gene3D Phosphorylase Kinase; domain 1 58 151 - -
Bva10g00232 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Bva10g00232 400 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 44 397 - -
Bva10g00232 400 ProSiteProfiles Protein kinase domain profile. 71 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00232 400 Gene3D Transferase(Phosphotransferase) domain 1 125 396 - -
Bva10g00232 400 SMART serkin_6 71 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00232 400 Pfam Protein kinase domain 71 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00232 400 MobiDBLite consensus disorder prediction 36 53 - -
Bva10g00232 400 MobiDBLite consensus disorder prediction 1 53 - -
Bva10g00232 400 MobiDBLite consensus disorder prediction 1 23 - -
Bva10g00232 400 SUPERFAMILY Protein kinase-like (PK-like) 58 398 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00232 Bva-Chr10 3489750 3494023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00232 71 396 Core Cell Cycle Gene Families AT1G76540 26.113 1.77e-27 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Bva10g00232 Pkinase 9.8e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00232 K08287 - gmx:100782453 687.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00232 10 3489750 3494023 Bva10g00232 10 3489750 3494023 ECH