Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00221 ATGCCGCCACTATCGGCGTTTGAGATTCCTCCTCCACTTTTGGAACCAATACCCCCTCCATTGAGTTCTCCGCCATCACCGTTGCATGCAGAGTCTCCAACTCTATCCTCAGCACCCCTAGGTACTTCGCCGCTGTTGCCCCCTCCTTCTGAAATGGTTCCAGCTTCTTCGCCTATATTTATGCCTCGGCTGGCTCCAAATCAGCCATTGTCATCCCCTCCATCCACGATAACTCTACTCCCTCCGGCGGCTCCAAATCCTCCATTGTCAAACCCTTCATCCACAATAAATCTACTCCCTCCGCCTGCTCCTTTGTCATCTCCGGCGCTGGTACCTCAGCCACTgccattttcatttccttccgCACCGGTACATTTTCCACCGTCAGTTCCAGTGCCACCAGCAATCACTTCTCCGCCAACTGTGCCGGCGCCTTTGCCATGTCCGCTGGCCCAGGTATCACAGCCACCGCCGTTTCCATTCCCTTCAACACCTGTGAATTTTCCATCGTTAGCTCCCGCGTCTCCAGGTTTTCCCCCAAAATCACTGCAAGTAACTTCCTCGCCTCCGGTTAATTCTCCAGCACCACCGTTGCGGATGCCGTTCCCCGAACCTCCGCATTGGTCTTCGGCAGCGCCGCCAACTTCTCCGTTAGAGCCTCCATTGTGGTCAAGTTTGCCAGTAGCCGTGGAAGTTAATAAGCCGTCGGGCTTTAACATGTCACGTGCAGCTATAGTTGGACTTGTAACTGGTGGGGCTATCCTTCTTGCCTTTATTCTCGGCCTTCTATATATCCGCCGCAACAGGAATAGGAGGGAAAAGAAGCATGACGACATCAAGGAAATACCCAATATTGGATCAAAAGGGTCACATGTTATTCAAGTGGAACCGCATCAAAATGATCCAATTCGGCAACCCACCATATCTCATGAAAGCAGTAAAGATTCTAGTTCTGCTAATTCAGTGTCAGAGAATGCAATTCAAAACCATGCTCCAATCACTGTCTTCGGTTCTGGGAATCATAATTTCACATATGATGAGCTAGTGGTAGCTACTAATGGTTTTTCAGAGGACAAGCTTCTTGGGCAAGGTGGTTTTGGGAATGTTTACAAAGGAGCTCTTCCAAATGGGAAGGAAATAGCAGTTAAGCAGTTAAAAACAGGAAGCCAACAGGGAGAACGAGAATTTCAAGCTGAGGTTGAGACCATTACCAGGGTGCATCATAAACATCTCGTTGAGTTGGTTGGTTACTGCATTAATGGAACAGAGAGGTTGCTAGTTTATGAATTTGTTCCAAATAACACATTGGAATTCCACTTACATGAAGATAATGTAAAGTATAATCCAGAAAAAGGGAAACCTGTCATGGAATGGACAACCAGAATGAAAATTGCCATAGGGTCTGCAAAAGGGTTGGCATATCTGCATGAAGATTGTAATCCAGCAGTCATTCATCGTGATATTAAAGCATCTAATATTCTTCTTGATTTTGGGTTTGAGGTAAAGGTTTCTGACTTTGGTATGGCCAAACTCTTTCCTAACACTGACAGTTGCATTACACACATCACCACTCGAGTGGTGGGAACCTTTGGgTATCTGGCTCCAGAGTACGCATCAAGTGGTAAATTAACAGATAAATCTGATGTATA 1649 0.4615 MPPLSAFEIPPPLLEPIPPPLSSPPSPLHAESPTLSSAPLGTSPLLPPPSEMVPASSPIFMPRLAPNQPLSSPPSTITLLPPAAPNPPLSNPSSTINLLPPPAPLSSPALVPQPLPFSFPSAPVHFPPSVPVPPAITSPPTVPAPLPCPLAQVSQPPPFPFPSTPVNFPSLAPASPGFPPKSLQVTSSPPVNSPAPPLRMPFPEPPHWSSAAPPTSPLEPPLWSSLPVAVEVNKPSGFNMSRAAIVGLVTGGAILLAFILGLLYIRRNRNRREKKHDDIKEIPNIGSKGSHVIQVEPHQNDPIRQPTISHESSKDSSSANSVSENAIQNHAPITVFGSGNHNFTYDELVVATNGFSEDKLLGQGGFGNVYKGALPNGKEIAVKQLKTGSQQGEREFQAEVETITRVHHKHLVELVGYCINGTERLLVYEFVPNNTLEFHLHEDNVKYNPEKGKPVMEWTTRMKIAIGSAKGLAYLHEDCNPAVIHRDIKASNILLDFGFEVKVSDFGMAKLFPNTDSCITHITTRVVGTFGYLAPEYASSGKLTDKSDV 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00221 549 ProSiteProfiles Protein kinase domain profile. 355 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00221 549 MobiDBLite consensus disorder prediction 1 100 - -
Bva10g00221 549 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 115 549 - -
Bva10g00221 549 MobiDBLite consensus disorder prediction 1 27 - -
Bva10g00221 549 MobiDBLite consensus disorder prediction 190 214 - -
Bva10g00221 549 MobiDBLite consensus disorder prediction 300 323 - -
Bva10g00221 549 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Bva10g00221 549 SUPERFAMILY Protein kinase-like (PK-like) 331 549 IPR011009 -
Bva10g00221 549 Gene3D Phosphorylase Kinase; domain 1 314 430 - -
Bva10g00221 549 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524
Bva10g00221 549 MobiDBLite consensus disorder prediction 177 214 - -
Bva10g00221 549 MobiDBLite consensus disorder prediction 75 100 - -
Bva10g00221 549 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK14 115 549 - -
Bva10g00221 549 Pfam Protein kinase domain 356 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00221 549 Gene3D Transferase(Phosphotransferase) domain 1 431 549 - -
Bva10g00221 549 MobiDBLite consensus disorder prediction 272 323 - -
Bva10g00221 549 SMART serkin_6 355 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00221 Bva-Chr10 3412288 3415303 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00221 267 549 Trihelix Transcription Factor Family AT4G32710 57.877 9.97e-105 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bva10g00221 Pkinase 3.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00221 - - gmx:100810262 422.935