Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00211 ATGGAAGGTGATAAGATAACCCCTGCTCCTTCAGCTGGGCTCAATGAAGGTGTTCAGAAAGTTAGAGCACTGCATGGGAGGACTAGTGGTCCTACAAGGCGTTCTACAAAAGGACAATGGACACCGGAAGAGGATGAGATATTGCGGAATGCTGTTCAGcgttttaaaggaaaaaattggaaaaaaatagCGGAGTGTTTCAAGGATAGAACCGATGTTCAGTGCCTACATAGATGGCAGAAAGTCTTAAATCCAGAACTTGTGAAAGGTCCATGGTCTAAAGAGGAAGATGAGATCATTATTGACTTGGTGAACAAATATGGGCCCAAAAAGTGGTCTACTATTGCACAGCATTTACCTGGACGTATTGGTAAGCAATGTCGAGAAAGGTGGCATAATCATCTTAATCctaatataaacaaagaagCATGGACCCAAGAAGAGGAATTGGCTCTAATACGTGCTCATCAGATATATGGGAACAGATGGGCAGAACTGACGAAATTCTTGCCTGGAAGGACAGACAATTCCATAAAAAATCACTGGAACAGTTCtgtcaaaaagaaattggatTCTTACTTGGCTTCAGGTTTGGTTACTCAGTTCCAAACTCTACCTCCTGTTGCGCATCCAAATCAACCTGTGGTTTCTACCTCTTCGAGATTGCAGTACAGTGGAGATGATAATGGTACTAAGGGGAATGAGGGAGAGGAAGTTTCGGAGTGTAGCCAAGGTTCAGCGACTGGTCGCTTTCAATCTGCAAGGGAGATGAGCAATGTTGTTTTGCATGCTAGAGAGGAATTCAGGGTAAATGAAGATTCTAGTCAAGCGAAGGAGCATAGTACTAGTCAAGCTTCCTGCTCTGAGCAGTATTATGTATCCCTTGATGATGTCGCTATATCCATCCCGGACATATCTCGCCAAGAGACATGCTCTTCTCAATTCGTCGAGGCTGGAAATTCTGCAAGCGGGGATTGCCAGTTTAATATACATTCCCTACCTAATATTTCTTCGCTTGACTTGGGGCAAGAATCCTTACAGTTGCAAATAGATTGTATAGTTCCTAATGAAAGCCATGACATGATGAAAGTTCCACTTCAGACTTCAGTGGGGTTTAATGTTTCAACATCTCTAGGACCTACATGTATGGATTCTGTTGGAGCAGAGCACATGTTGATATCTGATGAAGAATGTTGCAGAGTTCTATTTCAAGAGGCAATAAATGAAGGTTGCTTTTCCTCCGAAGATTATAGTAAAGGTGTAGACATGGTTGACTTATCTGGATGCACTTGTCCTCCAAATTCTAGTAACATAGTAGGAACTTCGTGCTCCCAATCTTTCCCTTGTGTTCCTTCAGTAATTTCTGCAGATGAAGGTAGACTAATTTATACTGCTGAagcaaatcaattatttggaGCAGAGGATCATCAATTTGTCTCCAGAGGGCATGGTCACTTCATTTATAACAATGACTCATCCAGTTCTCCCTGTATTAATGCTATAGACAGTGCAGCAATGCTAGAACCACTAGATACTGTAAAGGATAATTCAAAATTGGTCCCTGTAATTACTTTCAGCGGTGGATCAGATGCCAAGCAAAATTGTTTTCCAAATGATGAAAAGGCTGATGTGCATTCAGAACAGGACACAGGAGCTCTATGTTATGAACCTCCCCGTTTCCCAAGCTTGGAAATGCCTTTCCTGAGCTGTGATCTTATACAATCTGGGGACAACTTGCAGCAAGAGTTTAGTCCGCTGGGCATCCGCCAGCTGATGATGTCCTCAATGAACAGTCTAAGTCCCTTCAGGCTATGGGACTCGCCATCTCGTGATGATAGTCCTGATGCTCTGTTAAAAAGTGCTGCGAAAACTTTCAAGGGTACAccatcaatattaaaaaagcgACACCGAGACTTCTTATCACCTCTGTCAGACAGAAGAATGGACAAGAAACTTGAGACTGTCATGTTTGATAACAACGAGACTCGGGAAGCTCTGCTTTCTGGAACCTCTGCTGatgataacaaagaaaattgtgGTCAAGGGGAGCAATTAGaggggaaaaatgaaaatgcagaTACGAGAGATGGAAAGTCCAAAAAAGATGGCGGTGAAAAAGACTCTAAGGAGCAGCCACCTCTCGATGTTCATGCTTCGGAGATTCATCCTTCTGGAGTTCTGGTTGAACGTGATGTCAATGACTTCTTGTTGCATTCTCCTGATCAAGTTTTTAAATCAGACAGTGTTTTGGGATCAATAGAAAAAACTCCTAAAACTGAGAAAAATACCAAGTCGGAAGCAGCTGATGATCAGAACTTTGtctcaaaatcattttctggAAATCTACGTTCCCCTGTTGTTCGTTTAAAGGAGCATGAAAATCTTTCAGTTGCTGTTACTTGTGTACGGTCTGTTTGTTCATCAGCCCCTGGTGAGAAGAACACTGCCGATCATCCTGGAAACGACACTGGTTTTGAGGCATTTAACATATTTGGTGGAACACCATTTCGAAGAAGCATTGAATCGCCGTCGGCGTGGAAGTCTCCTTGGTTCATTGGCACTCTTCTGCCTAGTCCCAGACTCGATACGGAAATAACTTTTGAGGATCTTGGGTTATTCATGAGCCCAGGCGAAAGAAGCTATGACGCAATTGGGCTGATGAAACAAATAGGTGAACAAACTGCTGCTGCGTATGCGAATGCTCAGGAGATTTTGGGAAATGAAACTCCCAAGGCGTTACCAAAGGAAGCTCCTGAAAACGACAAGGATGTGGACAACGAAAACATTCAAACTGGGAACTCCCAGTTGGCTTCAAATGCTTTGATTGAGCGACGTATACTTGACTTCAGTGAATGCGGAACACCAGGGAAGGGTGAGAAAAGCAAATCCTCTGCTGTGAGCTTTTCAAGCCCTTCTTCGTATTTGTTGAAAGGTTGTAGATA 2942 0.4113 MEGDKITPAPSAGLNEGVQKVRALHGRTSGPTRRSTKGQWTPEEDEILRNAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIDLVNKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPNINKEAWTQEEELALIRAHQIYGNRWAELTKFLPGRTDNSIKNHWNSSVKKKLDSYLASGLVTQFQTLPPVAHPNQPVVSTSSRLQYSGDDNGTKGNEGEEVSECSQGSATGRFQSAREMSNVVLHAREEFRVNEDSSQAKEHSTSQASCSEQYYVSLDDVAISIPDISRQETCSSQFVEAGNSASGDCQFNIHSLPNISSLDLGQESLQLQIDCIVPNESHDMMKVPLQTSVGFNVSTSLGPTCMDSVGAEHMLISDEECCRVLFQEAINEGCFSSEDYSKGVDMVDLSGCTCPPNSSNIVGTSCSQSFPCVPSVISADEGRLIYTAEANQLFGAEDHQFVSRGHGHFIYNNDSSSSPCINAIDSAAMLEPLDTVKDNSKLVPVITFSGGSDAKQNCFPNDEKADVHSEQDTGALCYEPPRFPSLEMPFLSCDLIQSGDNLQQEFSPLGIRQLMMSSMNSLSPFRLWDSPSRDDSPDALLKSAAKTFKGTPSILKKRHRDFLSPLSDRRMDKKLETVMFDNNETREALLSGTSADDNKENCGQGEQLEGKNENADTRDGKSKKDGGEKDSKEQPPLDVHASEIHPSGVLVERDVNDFLLHSPDQVFKSDSVLGSIEKTPKTEKNTKSEAADDQNFVSKSFSGNLRSPVVRLKEHENLSVAVTCVRSVCSSAPGEKNTADHPGNDTGFEAFNIFGGTPFRRSIESPSAWKSPWFIGTLLPSPRLDTEITFEDLGLFMSPGERSYDAIGLMKQIGEQTAAAYANAQEILGNETPKALPKEAPENDKDVDNENIQTGNSQLASNALIERRILDFSECGTPGKGEKSKSSAVSFSSPSSYLLKGCR 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00211 980 MobiDBLite consensus disorder prediction 667 722 - -
Bva10g00211 980 SUPERFAMILY Homeodomain-like 38 93 IPR009057 -
Bva10g00211 980 MobiDBLite consensus disorder prediction 210 250 - -
Bva10g00211 980 MobiDBLite consensus disorder prediction 1 41 - -
Bva10g00211 980 ProSiteProfiles Myb-like domain profile. 136 186 IPR001005 -
Bva10g00211 980 ProSiteProfiles Myb-like domain profile. 84 135 IPR001005 -
Bva10g00211 980 CDD SANT 143 183 IPR001005 -
Bva10g00211 980 MobiDBLite consensus disorder prediction 679 716 - -
Bva10g00211 980 Pfam Myb-like DNA-binding domain 141 183 IPR001005 -
Bva10g00211 980 Pfam Myb-like DNA-binding domain 37 83 IPR001005 -
Bva10g00211 980 Pfam Myb-like DNA-binding domain 89 135 IPR001005 -
Bva10g00211 980 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 139 IPR017930 -
Bva10g00211 980 Gene3D - 36 88 - -
Bva10g00211 980 MobiDBLite consensus disorder prediction 907 935 - -
Bva10g00211 980 PANTHER MYB PROTEIN-RELATED 6 979 - -
Bva10g00211 980 Gene3D - 89 140 - -
Bva10g00211 980 SUPERFAMILY Homeodomain-like 86 182 IPR009057 -
Bva10g00211 980 CDD SANT 40 83 IPR001005 -
Bva10g00211 980 MobiDBLite consensus disorder prediction 960 974 - -
Bva10g00211 980 MobiDBLite consensus disorder prediction 953 980 - -
Bva10g00211 980 PANTHER TRANSCRIPTION REPRESSOR MYB5 6 979 - -
Bva10g00211 980 ProSiteProfiles Myb-like domain profile. 32 83 IPR001005 -
Bva10g00211 980 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 83 IPR017930 -
Bva10g00211 980 Gene3D - 142 201 - -
Bva10g00211 980 CDD SANT 91 135 IPR001005 -
Bva10g00211 980 SMART sant 36 85 IPR001005 -
Bva10g00211 980 SMART sant 88 137 IPR001005 -
Bva10g00211 980 SMART sant 140 188 IPR001005 -
Bva10g00211 980 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 190 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00211 Bva-Chr10 3364293 3370427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00211 9 980 MYB Transcription Factor Family AT4G32730 44.596 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva10g00211 Myb_DNA-binding 4.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00211 - K09420 gmx:100811335 1273.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00211 10 3364293 3370427 Bva06g02532 06 16036493 16042300 BWGD
Bva10g00211 10 3364293 3370427 Bva10g00211 10 3364293 3370427 ECH