Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00202 AtggaaattcaatttcaaacgATGGAGCAGAGTGAAACTATTTCCGATTTAGCCCCACGGAAATTGGCGAGGCAATTGGATTTCACCGCCGTAAGTAGAGGTCCGGTCAATGTGGAATTGCCGGAGCCACTTAAATCGCCTACAGATACGTTACTATCACGGCCAAAATCAATTTTGCTGTCACAATCACAATCGCCGTCTCAAATACAAATTCAATCGCAGTCACAGTCGCTTGCATATCCGCCGCGCTCACCATTGCATTTACCGTCGAAGGGACGACAGCCATGGTCATATTCACCTATGCTACTGCAGAGAGCTTCACAGTCTGAAGAGACGGAAGGGCGACCACAGCTAGTGTCACCAGCCCGTCGCATTCCGCACCCAGGGCCGAAACTGCCAGTGTCAACATTTCAAGTGTTGAAGCAAGACTCTCCAAGATCACAATCTCAGAATAATGTGGAACCAAAAGACAGCAcaccaaagaaacaaaaacattgtAACTGCAAAAATTCTCGATGCCTCAAATTGTACTGTGATTGCTTTGCAATGGGAATTTATTGCGATGGCTGCAACTGTACAAATTGTCATAATAATGTGGAAAATGAGGTTGCTAGAGAGGAGGCtgttaaaacaatattaattcgTAATCCCAATGctttcaaaccaaaaattgGTAGCAGTCCTCATGAATCACGGGATTGTAAGGAAGACATGAATGAAATCCAAGTAGTAGAAAAGCACAATAAAGGTTGTAACTGCAAGAAATCAGGTTGCCTTAAGAAGTATTGTGAGTGCTTCCAAGCCAATATCCTCTGCTCTGAACTCTGTAAATGCATGGACTGCAAGAATTTTGAAGGaagtgaagaaagaagagcGCTTTTCCATGAAGAGTATAATTCAGTTCACTTAAAACAGGCAGCTAATGACGCCATTACGGGAGCAATTGGATCCTCCAGCTATGGGACCAATATGACgcccaaaagaagaaaaattcaggAAATATTTTCTGGGAAAGCAGCTAAAGACCAAACTATTAACATGACTACTCAACGACAACAGGAAATTGGTCCAATAGCTTCTATGCCTCCTCTACCAGTTTCTGTCGTTCCTGAGGCTACCAATGCAGCATTTTCAGGGTCTTTAAGATTTACATACAGGTCACCACTTGCGGATGTCCTCCAGGAACAGGACGTGAAGAATCTTTGTTCACTTTTTGTTGTTCTCTCAGGAGTGTCTGCAAACACAATTGCAGAAACAGGCAAAAAAGAGACAGAGAACCATGAAGCGTTTACTTCATCAGGTCAATTGCCGAAAGATAATGAAGAAGCCCACAGGCCTGTTCGTGATGgtcattttgatttaaatgaaGCAGTTCTAGGTGAAACCAATGATTCTGGACCTGATGAAGTTAAACCACGCAAATATAGTAGGCCATTATCACCAGCAACACTAGCATTGATGTGTGACGAAGAAGATGAAACTTTTCTGGCTGATGGTTCTGCCAATGGAGTGGCATACTGTGGTCAACATATGACTCAGAAGTCATCTAATGCTGATCGTTGTACATATCTTTATGAACAACAGGAGAGACTCGTCCTCACCAGGTTCTGGGATTTTCTTCGTGGACTCATCACTCGTGGAAGCGTAAAAGAGACAATGTGTTTGAGAGAGGTGGGGAACAACATAGAACCTGTAGAGAATGGTAACATTGAAGCTGAAACTGATACATGGAGTGAGATGAAAATTCAAAGCAACGAGACTGCGAAGTCCCCCATGGTAGCGCCTAATGAAGTGTCTCAGCCAAATAGTGGAATAACTAATGGGCATGGTAATACTGATCTGACGTTAAGGATCGGCCTAACAACTGGAAAGTTGGGATA 1880 0.4069 MEIQFQTMEQSETISDLAPRKLARQLDFTAVSRGPVNVELPEPLKSPTDTLLSRPKSILLSQSQSPSQIQIQSQSQSLAYPPRSPLHLPSKGRQPWSYSPMLLQRASQSEETEGRPQLVSPARRIPHPGPKLPVSTFQVLKQDSPRSQSQNNVEPKDSTPKKQKHCNCKNSRCLKLYCDCFAMGIYCDGCNCTNCHNNVENEVAREEAVKTILIRNPNAFKPKIGSSPHESRDCKEDMNEIQVVEKHNKGCNCKKSGCLKKYCECFQANILCSELCKCMDCKNFEGSEERRALFHEEYNSVHLKQAANDAITGAIGSSSYGTNMTPKRRKIQEIFSGKAAKDQTINMTTQRQQEIGPIASMPPLPVSVVPEATNAAFSGSLRFTYRSPLADVLQEQDVKNLCSLFVVLSGVSANTIAGKKETENHEAFTSSGQLPKDNEEAHRPVRDGHFDLNEAVLGETNDSGPDEVKPRKYSRPLSPATLALMCDEEDETFLADGSANGVAYCGQHMTQKSSNADRCTYLYEQQERLVLTRFWDFLRGLITRGSVKETMCLREVGNNIEPVENGNIEAETDTWSEMKIQSNETAKSPMVAPNEVSQPNSGITNGHGNTDLTLRIGLTTGKLG 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00202 624 MobiDBLite consensus disorder prediction 60 81 - -
Bva10g00202 624 MobiDBLite consensus disorder prediction 137 156 - -
Bva10g00202 624 SMART CXC_2 246 287 IPR033467 -
Bva10g00202 624 SMART CXC_2 161 201 IPR033467 -
Bva10g00202 624 MobiDBLite consensus disorder prediction 100 115 - -
Bva10g00202 624 PANTHER TESMIN/TSO1-RELATED 8 597 IPR028307 -
Bva10g00202 624 MobiDBLite consensus disorder prediction 455 474 - -
Bva10g00202 624 MobiDBLite consensus disorder prediction 60 165 - -
Bva10g00202 624 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 163 198 IPR005172 -
Bva10g00202 624 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 249 283 IPR005172 -
Bva10g00202 624 MobiDBLite consensus disorder prediction 422 441 - -
Bva10g00202 624 ProSiteProfiles CRC domain profile. 162 286 IPR005172 -
Bva10g00202 624 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 8 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00202 Bva-Chr10 3323384 3328225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00202 125 580 CPP Transcription Factor Family AT4G29000 48.085 8.55e-125 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Bva10g00202 TCR 2.6e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00202 - K21776 gmx:100811459 622.468