Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00197 ATGAAAACCCATCAACCAAAGCTCAAGACCCAACTATTCTCTTGTGGCTTCTTTCGCCACTGCGCTCAAACCGTCCTCAGCCCCACTGCCACCCACCACCCTCCAACTCTCCCTCTCACTCTCACCGGCTCTCCCTCAACTCCACCACCGCCACcgcctccaccaccaccaccgcTTCGTTTAAGTGAGTCCTCCAcctcttcctcctcttcttctgcAACTTCTCAGAGCTTCACCCAGTGGAGATTCTCTCTTCCCACCTCAACTGCTCCCCAAGAAACCCAGCACCACCAGCAACCACAACCGCAGCCAACGCCTTCTCTCCCACCTGACCCGATCCATCCCCCAAACCTCCAAGAACTCTTCCACGTCTCGGAGCTCCAACTCAGCAGTTGTTCGGACATTGACCGTATTGCTGCGCTCCACCTTCTAGAACGATCCCTTGTCCCCAACCCACCAGCTGACCAGCCACCCTGCCCTCCAGAGCTCATGCGTGGGCTCATTTGGAATTTGAGAAGCTCAACTGGGGCAAAACCGGCAACCAAAATACTCTTTGCGCTTTGCTTGGCCGAGGGCAACCGGCGCGTGGCTGTGGAGGTTGGGGCAGTGGGTGCCGTAATTGAATCGGCACCGGAGCTGGATGGACCGCCAGCGGAGAGAGCACTAGCTGCTCTGGAGCTCATGTGTACGGTGGCAGAAGGAGCCGAAGAAGTGAGAGCCCACGCGCTTGCTGTACCCGTGATGGTAACCATGATGGGCAAGATGGGGCCACGTGGGAAAGAATATGCGATTGGCGTATTGGCTGTGATCTACGGCGGTGTGACAGAGGATCAGCACACCGCACCACCGGAAGAGGTGGCGCGTGCGGTGGAGCTAGCCCTCCAAGGGGAATGCAGTGCAAGGGGAAGAAGGAAAGGGGCCCAACTGCTGAAGACACTGCAAGATTATGGGAAGCCTCAAGTAACAGTCCTAGTCACAGAAGAAGAGGGTTG 992 0.5454 MKTHQPKLKTQLFSCGFFRHCAQTVLSPTATHHPPTLPLTLTGSPSTPPPPPPPPPPPLRLSESSTSSSSSSATSQSFTQWRFSLPTSTAPQETQHHQQPQPQPTPSLPPDPIHPPNLQELFHVSELQLSSCSDIDRIAALHLLERSLVPNPPADQPPCPPELMRGLIWNLRSSTGAKPATKILFALCLAEGNRRVAVEVGAVGAVIESAPELDGPPAERALAALELMCTVAEGAEEVRAHALAVPVMVTMMGKMGPRGKEYAIGVLAVIYGGVTEDQHTAPPEEVARAVELALQGECSARGRRKGAQLLKTLQDYGKPQVTVLVTEEEG 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00197 330 SUPERFAMILY ARM repeat 129 313 IPR016024 -
Bva10g00197 330 MobiDBLite consensus disorder prediction 102 116 - -
Bva10g00197 330 MobiDBLite consensus disorder prediction 30 117 - -
Bva10g00197 330 MobiDBLite consensus disorder prediction 62 101 - -
Bva10g00197 330 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 322 - -
Bva10g00197 330 MobiDBLite consensus disorder prediction 41 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00197 Bva-Chr10 3292109 3293247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00197 171 315 U-box Gene Family AT1G49780 34.247 2.76e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00197 - - ahf:112716144 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00197 10 3292109 3293247 Bva10g00197 10 3292109 3293247 ECH