Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00191 ATGGAGAGGATTATTGGAGGAAAGTATAAGTTAGGTCGAAAAATTGGGGGCGGATCATTTGGTGAAATTTATATTGcCGCCGAGATTGGGACTCCTGAGGTTGTGGCCGTGAAGATGGAAAACAAGAAGACTAAACATCCGCAACTACTGTATGAGGCCAAGTTATATAGTGTTCTTGAAGGAGGAAGTGGTATTCCAAATTCAAAATGGAGTGGCACTGATGGAGACAATAATGTTCTAGTCCTGGATCTTCTGGGTCCAAGTCTTGAGGACCTTTTTGCCTACTGTGGGAGGAAGTTTTCATTAAAAACAGTTTTGATGTTGGCTGATCAGATgCTTTCAAGGATAGAATATGTGCATTCCAAGGGATTTTTGCATAGAGACATCAAACCGGATAATTTCCTTATGGGCCTGGGGAGGAAAGCAAATCAGGTTTTCATTATTGACTTTGGACTCGCAAAGAGATATAGAGACCCTAACACAAACAAGCATATTCCTTACAGagagaacaaaaatttaactGGGACTGCACGTTATGCGAGTTGCAATACTCATTTAGGAATTGagcAAAGTCGTCGGGATGATTTGGAGTCACTTGGCTATGTTcttctgtattttttaagaggAAGCCTTCCTTGGCAAGGTCTGAAGGCTCttaataaaaagcaaaaatatgaCAAGATTTGTGAAAAGAAGTTATCAACTCCCATTGAGTTCCTCTGCAAATCATATCCCGTGGAGTTTGCTTCGTACTTTCATTATTGCCACTCCTTGACATTTGATCAACGGCCAGATTATGGATTCTTGAAGCGCCTGTTTCGTGACTTGTTCACTCGTGAAGGATATGAATTAGACTATATGTTTGACTGGACCATTCACAAATATCAACAGAAGCAACAGACAAAGACGCAGGGCCAATCAACCCCTGCTGCTGATGTGCCTAGCAGCCTGGAGCCAACGGTTGTGAATAATCATAAAGgtGTCAATGGTTCTGCTCAAATCACCGAGGCAAGACCATCAACCAATCTCAGTTGTCCACGTGTTAACATACAGCTTAGGCCATCACATGTTCAGAATCAGAATGCTGAAAGTCAGATTGAGAAACTTTCTGTAAACAATGGTCCATCCGATCCGCCTGTGTTGCCGAGAGTGTCTATAGAAAATGTGTCAAAACCAGAAAGGCCTATAGGAACCTCAAATGCAGTGCGTGTATTTGGCAATAATTCTGGTGCTTCAAGCAGCTTGTTTCCTTCGCTACGCCGAATTTCTTCTGCCAAATA 1280 0.4055 MERIIGGKYKLGRKIGGGSFGEIYIAAEIGTPEVVAVKMENKKTKHPQLLYEAKLYSVLEGGSGIPNSKWSGTDGDNNVLVLDLLGPSLEDLFAYCGRKFSLKTVLMLADQMLSRIEYVHSKGFLHRDIKPDNFLMGLGRKANQVFIIDFGLAKRYRDPNTNKHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKALNKKQKYDKICEKKLSTPIEFLCKSYPVEFASYFHYCHSLTFDQRPDYGFLKRLFRDLFTREGYELDYMFDWTIHKYQQKQQTKTQGQSTPAADVPSSLEPTVVNNHKGVNGSAQITEARPSTNLSCPRVNIQLRPSHVQNQNAESQIEKLSVNNGPSDPPVLPRVSIENVSKPERPIGTSNAVRVFGNNSGASSSLFPSLRRISSAK 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00191 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Bva10g00191 426 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00191 426 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00191 426 MobiDBLite consensus disorder prediction 301 321 - -
Bva10g00191 426 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Bva10g00191 426 Pfam Protein kinase domain 9 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00191 426 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 407 - -
Bva10g00191 426 MobiDBLite consensus disorder prediction 401 426 - -
Bva10g00191 426 Gene3D Transferase(Phosphotransferase) domain 1 1 333 - -
Bva10g00191 426 PANTHER CASEIN KINASE-RELATED 1 407 - -
Bva10g00191 426 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Bva10g00191 426 MobiDBLite consensus disorder prediction 389 426 - -
Bva10g00191 426 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00191 Bva-Chr10 3263988 3269727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00191 8 213 MAP Kinase Kinase Kinase AT2G32510 27.962 1.32e-12 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Bva10g00191 Pkinase 3.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00191 K08960 K08959 gmx:100810377 650.973