Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00189 ATGGTGGACCCAAAGAAGGGCCCACTAGGTGGGCTTGGGCCAACACTGGTTTGTTTTGTAGTAGGGGCTAATGTCTTGGCTGGTGGAACATTTTCTGGAGCTGCCATGAACCCTGCAAGGGCTTTTGGACCTGCTTTGGTCAGCGGAAACTGGACGGATCACTGGGTCTACTGGGTTGGACCCTTCATCTGCGGTAAAAATAGATTTCCTGCAGTGACTGCGCGGAAATTCAGGTCCATCGGCGGTGGCCTTGCTGGATTTGTCTACAAAAACTTCTTCATTGACAGATCACATGCTCCGGTTCCACGAGATGAAGAAAACCACTA 326 0.5092 MVDPKKGPLGGLGPTLVCFVVGANVLAGGTFSGAAMNPARAFGPALVSGNWTDHWVYWVGPFICGKNRFPAVTARKFRSIGGGLAGFVYKNFFIDRSHAPVPRDEENH 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00189 108 PANTHER AQUAPORIN TIP4-1 1 107 - -
Bva10g00189 108 PRINTS Major intrinsic protein family signature 18 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva10g00189 108 PRINTS Major intrinsic protein family signature 55 75 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva10g00189 108 Gene3D Glycerol uptake facilitator protein. 1 66 IPR023271 -
Bva10g00189 108 PANTHER AQUAPORIN-8 1 107 IPR034294 -
Bva10g00189 108 SUPERFAMILY Aquaporin-like 2 103 IPR023271 -
Bva10g00189 108 Pfam Major intrinsic protein 3 65 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00189 Bva-Chr10 3256217 3256657 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00189 1 106 Major Intrinsic Protein MIP AT2G25810 64.151 3.20e-42 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00189 K09873 - gmx:100811447 151.754