Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00182 ATGAGTGTTGAACCCCAGAATTCTGAAACAGAGAGCAGCTCAAACTCATTCACTTCCCCACCAACATCGCCGTCTTCTCCCCTTTCAAAGGCTAAAACAAAGGACCCAGAATCCAAAAAGGTAAAACGCATTCGAGACTCCAACAAGCACCCAGTCTATCGTGGGGTCCGTATGCGCAATTGGGGCAAATGGGTCTCAGAAATCCGTGAGCCACGCAAGAAATCGCGTATATGGCTGGGCACATTCCCGTCCCCTGAAATGGCTGCAAGAGCACATGATGTCGCTGCTTTGAGCATCAAAGGTAACGCGGCCATTCTCAATTTCCCCGAACTAGCTCACTTGCTGCCACGCCCTGTCTCACTCGCCCCCCGCGACGTGCAGGCAGCAGCGGCCAAAGCTGCTCAAATGGACAACTTCGACTCCCCCAAATCAAACTCATCTTCAACATTGTCATCATCGTCCTCGCTCTCCTCCTTGGTTTCAGCAATGGACTTGTCTTCTGCCTCTGACGAATTGAGCGAGATCATAGAGTTGCCCAGATTGGAGACAGATCACGAGACATTCGAGTTGGGGAAAAAGGAGTTTGTGTTTATAGACTCAGGGGATGGGTGGATGTATCAGCCATCGTTGTTGCAGAGCATGGAAGATTGCGATGCCTATATAGTTGATCAGCTTGCATTGCCACAAAGTGAGGGTACAAATTGTTTTGACAGTTTGTTGTGGAATTACTA 731 0.4938 MSVEPQNSETESSSNSFTSPPTSPSSPLSKAKTKDPESKKVKRIRDSNKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNAAILNFPELAHLLPRPVSLAPRDVQAAAAKAAQMDNFDSPKSNSSSTLSSSSSLSSLVSAMDLSSASDELSEIIELPRLETDHETFELGKKEFVFIDSGDGWMYQPSLLQSMEDCDAYIVDQLALPQSEGTNCFDSLLWNY 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00182 243 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 5 242 - -
Bva10g00182 243 MobiDBLite consensus disorder prediction 133 152 - -
Bva10g00182 243 SUPERFAMILY DNA-binding domain 52 110 IPR016177 GO:0003677
Bva10g00182 243 ProSiteProfiles AP2/ERF domain profile. 52 109 IPR001471 GO:0003700|GO:0006355
Bva10g00182 243 CDD AP2 53 111 IPR001471 GO:0003700|GO:0006355
Bva10g00182 243 MobiDBLite consensus disorder prediction 1 50 - -
Bva10g00182 243 SMART rav1_2 52 115 IPR001471 GO:0003700|GO:0006355
Bva10g00182 243 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 5 242 - -
Bva10g00182 243 MobiDBLite consensus disorder prediction 1 31 - -
Bva10g00182 243 Gene3D AP2/ERF domain 52 110 IPR036955 GO:0003700|GO:0006355
Bva10g00182 243 MobiDBLite consensus disorder prediction 32 50 - -
Bva10g00182 243 PRINTS Ethylene responsive element binding protein signature 53 64 IPR001471 GO:0003700|GO:0006355
Bva10g00182 243 PRINTS Ethylene responsive element binding protein signature 75 91 IPR001471 GO:0003700|GO:0006355
Bva10g00182 243 Pfam AP2 domain 51 101 IPR001471 GO:0003700|GO:0006355
Bva10g00182 243 MobiDBLite consensus disorder prediction 138 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00182 Bva-Chr10 3225508 3226719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00182 21 216 AP2-EREBP Transcription Factor Family AT5G11590 65.174 1.41e-68 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Bva10g00182 AP2 6.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00182 K09286 - tcc:18587975 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00182 10 3225508 3226719 Bva10g00182 10 3225508 3226719 ECH