Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00169 ATGGCTAAAGGAACTGAAACGTTTCGAATCTGCTTCATGTTTATGTGGCtgttgatgttgatgttgatgCTCAACAATGTTGCAGCATCGGATGAAGGTGAGCTTCTGCTATCCTTGAAGGCTTCCATCGACGACGACCCTCTTCACGTTCTCTCCAACTGGGTTCTCACTTCTTCAAATTCCACTATCTGCAAGTGGCGTGGCATCACCTGCGACAACTCGTCCCATGTTATTGCCGTCGAGCTCTCCGGTGTTAACATCTCCGGCAACATtcccttttccatttttcatctACGACATGTTTCAAACATCGACCTCTCCAACAATAAACTCACCGGGGAAATTCTTCTCGAGTCTCTTCCTCTCACAACATCATCTCTTCGCTACCTCAACCTTAGCAACAACAATCTAACAGGTTTGCTACCGCAAAGGCTGTTCTCCATGTCGTTTTCCCGCCTCGAAACTCTGGACCTGTCCAACAACATGTTCTCCGGGAACATATCAGACCAAATTGGATTGCTTTCCAGTCTGACATATCTTGATCTTGGTGGAAACGTGTTAATGGGAAAAATCCCAGATTCCATCACCAACATGTCAAGCTTACAATACTTGACTTTGGCTTCGAACCAGTTAGTGGGTGAAATACCAAAAGAGATTCGCCTAATGAAGAGCTTGACGTGGATTTACCTGGGCTACAACAACCTCTCAGGTGAGATTCCCAAGGGAATTGGAGAATTGGTTTCATTGAATCATCTTGACCTTGTATATAACAATCTCAGTGGACAAATTCCCGAGTCTCTGGGGAATCTTTCTGAGCTTCAGTATCTCTTTCTCTACCAAAACAAGCTCACGGGTCCAATTCCTCTATCCATTTTTGAGCTGAGAAAGCTCATTTCTCTTGATCTTAGTGACAATGCTCTATCCGGTGAGATTCCCGAGCTTGTTATTCAGCTGCAGAGATTAGAAATTCTTCACCTTTTCTCCAACAACTTTACCGGTAAGATTCCAAAGGCCCTAACCTCTTTGCCTCGCCTTCAAGTCCTTCAGTTATGGTCAAACAGATTAACGGGTGAGATCCCAAAGGAGCTGGGAAAGCACAACAATCTCACTGTTTTGGACCTATCCACCAACAACCTTTCTGGGAAAATCCCAGAAAATTTATGCTCCGGCAATCTTTATAAGCTTATCTTGTTCTCCAATTCTCTTGGAGGACGAATTCCAAATAGCTTGAGTTCTTGCAGAAGCTTAGGGCGAGTGCGTCTCCAGAACAACAAGTTTTCTGGTGAATTACCACATGAATTAACGGAACTTCCAAATATATACTTCTTGGATATCTCTGGCAATCAACTTTCTGGAAGAATTGATGACAGGAAGTGGAATATGCCTATGCTTCAAATGCTGAATTTGGCAAACAATAACTTCTCCGGGGAGTTGCCAAACTCGTTTGGGAGTGAAAAGTTGGAGAACCTGGACTTGTCGGAGAATCAATTTACGGGTTATATTCCGTCTGGGTTTGGAAACTTATCGGAGCTGATGCAATTGAAGCTGAGCAATAACAAGCTCTCTGGTAATATCCCACAAGAATTGTCTTCATGCAAGAATCTTGTTAATCTAGACCTCAGCCACAATCAACTCAGTGGCCAAATCCCGGTGAGTCTTGCTGATATGCCGGTTCTGGGTTTTCTTGATTTGTCAGAAAACCAATTGTCCGGTGAAATCCCATACAACTTGGGAAGCGTGGAATCTCTTGTTCAGGTAAATATATCGCACAACCACTTCCATGGCAGGTTACCTTCCACTGGTGCTTTTCTTGCCACTAATGCTAGTGCAGTCACCGGCAACGACCTTTGTGCCGGCGAGAGTGATAGTTTAAGTGCTTTGCCACCATGCAAAGGCTTTAGGAGTCCATCTTGGTGGTTTATTTTCCTGTGTTCTCTAGTGGCATTAGCGGCATTTGCTATGGCTGCTTTTATCATAGTTTTTGTCCCCAGAAGAAGGAACTTGGATCTGCAGAGAGTGGAAAATGAAGATGGCACCTGGGAAATACAATTCTTTGAACCCAAGACCTCGAAACTGATCACCGTTGACGATGTCATGTCTTGGTCAAAGGAAGGAAATCATATTTCCAAAGGAAGGAAATGGGTTTCGTACAAAAGGAAGTGCATGGCAAATGACATGCAATTCGTGGTCAAAGAAATCAACGACCTAAATTCAATTCCTGTGAATTTCTGGGATCAGGTGTTGGAGTCTGGGAAGCTCCGGCATCCGAACATCGTTAATCTGATCGGAATATGCAGGTCTGTTAAAGGAGTCTACCTGCTTTATGAATACGTTGAGGGAAAGTGTCTAAGCCAAATTCTCAGAAATTTGAGCTGGGAACGGCGACGGAAAATTGCTGTGGGGATTGCGAGGGCACTAAAGTTTTTGCATTGCCATTGTTCGCCCAGTGTCTTGGTGGGTGACGTGTCACCGGAGAGAGTTCTGGTCGACGGAAAAGATGTCCCTCACCTGAATTTGAGACCTCCGGGAATGCTTTGTACGGACGTCAAGGGTTTCATTTCTTCCGCCTACGTTGCACCAGagATGAGAAATGGCAAAGGAGTGACAGAGAAGAGCGACGTTTATGGATTTGGACTTATTCTGATCGAATTATTGACGGGAAGAAGTCCGGTGGCGGGGGACGCAGAAATGGGAATGCACCGTGACCACAAGAGCATTGTGGAGTGGGCCCGCTACAGCTATTCGGACCGTCTTTTGGATATGTGGATCGACCCGATGATGAAGGGTGACGAGTTTGGCCCCAATTCCAATTCCAACACTCAAAACGAGATCGTTCAGACAATGAAGTTAGCACTTCAGTGCACAGCCAGAGAGCCCACGGCAAGGCCATGCGCAAGCCATGTCTTGAAAACCCTAGAGGCAGTTGCACGACCCAGTTTTTCCTGTGTTTCAgcactaaaattatg 2966 0.4454 MAKGTETFRICFMFMWLLMLMLMLNNVAASDEGELLLSLKASIDDDPLHVLSNWVLTSSNSTICKWRGITCDNSSHVIAVELSGVNISGNIPFSIFHLRHVSNIDLSNNKLTGEILLESLPLTTSSLRYLNLSNNNLTGLLPQRLFSMSFSRLETLDLSNNMFSGNISDQIGLLSSLTYLDLGGNVLMGKIPDSITNMSSLQYLTLASNQLVGEIPKEIRLMKSLTWIYLGYNNLSGEIPKGIGELVSLNHLDLVYNNLSGQIPESLGNLSELQYLFLYQNKLTGPIPLSIFELRKLISLDLSDNALSGEIPELVIQLQRLEILHLFSNNFTGKIPKALTSLPRLQVLQLWSNRLTGEIPKELGKHNNLTVLDLSTNNLSGKIPENLCSGNLYKLILFSNSLGGRIPNSLSSCRSLGRVRLQNNKFSGELPHELTELPNIYFLDISGNQLSGRIDDRKWNMPMLQMLNLANNNFSGELPNSFGSEKLENLDLSENQFTGYIPSGFGNLSELMQLKLSNNKLSGNIPQELSSCKNLVNLDLSHNQLSGQIPVSLADMPVLGFLDLSENQLSGEIPYNLGSVESLVQVNISHNHFHGRLPSTGAFLATNASAVTGNDLCAGESDSLSALPPCKGFRSPSWWFIFLCSLVALAAFAMAAFIIVFVPRRRNLDLQRVENEDGTWEIQFFEPKTSKLITVDDVMSWSKEGNHISKGRKWVSYKRKCMANDMQFVVKEINDLNSIPVNFWDQVLESGKLRHPNIVNLIGICRSVKGVYLLYEYVEGKCLSQILRNLSWERRRKIAVGIARALKFLHCHCSPSVLVGDVSPERVLVDGKDVPHLNLRPPGMLCTDVKGFISSAYVAPEMRNGKGVTEKSDVYGFGLILIELLTGRSPVAGDAEMGMHRDHKSIVEWARYSYSDRLLDMWIDPMMKGDEFGPNSNSNTQNEIVQTMKLALQCTAREPTARPCASHVLKTLEAVARPSFSCVSALKL 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00169 988 Pfam Protein kinase domain 720 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00169 988 Pfam Leucine rich repeat 151 211 IPR001611 GO:0005515
Bva10g00169 988 Pfam Leucine rich repeat 486 545 IPR001611 GO:0005515
Bva10g00169 988 Gene3D Ribonuclease Inhibitor 23 84 IPR032675 -
Bva10g00169 988 Gene3D Ribonuclease Inhibitor 85 388 IPR032675 -
Bva10g00169 988 Gene3D Ribonuclease Inhibitor 389 628 IPR032675 -
Bva10g00169 988 Gene3D Transferase(Phosphotransferase) domain 1 776 981 - -
Bva10g00169 988 SUPERFAMILY L domain-like 46 384 - -
Bva10g00169 988 PRINTS Leucine-rich repeat signature 127 140 - -
Bva10g00169 988 PRINTS Leucine-rich repeat signature 508 521 - -
Bva10g00169 988 PANTHER - 13 986 - -
Bva10g00169 988 ProSiteProfiles Leucine-rich repeat profile. 126 147 IPR001611 GO:0005515
Bva10g00169 988 SUPERFAMILY Protein kinase-like (PK-like) 699 973 IPR011009 -
Bva10g00169 988 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 13 986 - -
Bva10g00169 988 Pfam Leucine Rich Repeat 126 143 IPR001611 GO:0005515
Bva10g00169 988 Gene3D Phosphorylase Kinase; domain 1 671 775 - -
Bva10g00169 988 ProSiteProfiles Protein kinase domain profile. 646 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00169 988 SUPERFAMILY L domain-like 359 598 - -
Bva10g00169 988 Pfam Leucine rich repeat N-terminal domain 30 72 IPR013210 -
Bva10g00169 988 SMART LRR_typ_2 508 532 IPR003591 -
Bva10g00169 988 SMART LRR_typ_2 461 484 IPR003591 -
Bva10g00169 988 SMART LRR_typ_2 368 390 IPR003591 -
Bva10g00169 988 SMART LRR_typ_2 124 148 IPR003591 -
Bva10g00169 988 SMART LRR_typ_2 198 222 IPR003591 -
Bva10g00169 988 SMART LRR_typ_2 246 270 IPR003591 -
Bva10g00169 988 SMART LRR_typ_2 294 318 IPR003591 -
Bva10g00169 988 SMART LRR_typ_2 556 580 IPR003591 -
Bva10g00169 988 SMART LRR_typ_2 150 174 IPR003591 -
Bva10g00169 988 SMART LRR_typ_2 342 366 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00169 Bva-Chr10 3137400 3141269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00169 14 973 Receptor kinase-like Gene Family AT2G25790 53.807 0.0 924
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Bva10g00169 Pkinase 3e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00169 - - gmx:100777118 1277.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00169 10 3137400 3141269 Bva10g00169 10 3137400 3141269 ECH