Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00163 ATGCCTGAACTGCGTAGCAGAGCACGCAGAAACCGGGCATTAGATAACCCAAACCCGAACCCGATTAGCCAACAGCATCCGCCAGGACACCAAGTTGATAGACCGGCGGTGAGAACTCGGCAGAGGAGAAGAACCTCGCAAAATAGGAGGATTCGGAAGCAGAAGAACACCATCGGAGTTGATGAAACCAATCGTATTCTGAATAAGGGCTTCGGTACGGTTCCTGAAACGAGGACCTTCAAagacaagaaagaagataGAGAAGACCAACCACCAGAGGCATCCCTTAGGGTTTTGAGGGAGGAAGTTGGGGAGAAAGCCATGGATGAGTACGACAGTGGTGACCGAAGCGCCGATAAGGCCCCGGTAGCCGAAGATGAGGGCAGCACTGCTCCTCTTCCTGAGAAGGTCCAGGTGGGTGGTTCACCAGTTTACAGAATTGACAGAAAGCTGGGGAAAGGTGGATTCGGACAGGTTTATGTTGGTCGGCGAGTTGGAGCTACAAATTTGAATGAACGAACTGGCGCAGGGGCTGTAGAAGTGGCCTTAAAATTCGAACACAGAAGCAGTAAAGGGTGTAATTATGGACCGCCGAATGAGTGGCAGGTTTACAATGCTCTTGGTGGGAGTCATGGTGTTCCGCGAGTTCATTACAAGGGCCGGCAAGGTGACTACTATGTCATGGTCATGGATATGCTCGGCCCTAGTCTATGGGATGTGTGGAACAACAACTCACATTCGATGTCTATAGAAATGGTAGCATGTATCGCTATTGAAGCAATCTCCATATTGGAGAAGATGCATTCTAGAGGATACGTGCATGGTGATGTAAAACCTGAGAACTTCTTGCTTGGTCCTCCTGGAACTGCTGATGAGAAGAAGCTGTTTCTTGTTGACCTTGGATTAGCCACACGCTGGCGTGATAATTCAACTGGCCTTCATGTTGAGTACGATCAACGTCCTGATGTATTTAGGGGGACAGTACGTTATGCTAGTGTACATGCTCATCTTGGTAGAACAGGTAGCAGGAGAGACGACTTGGAATCTCTGGCTTACACACTTGTCTTCCTTCTCCGTGGCCGGTTACCCTGGCAAGGATACCAGGGAGAAAATAAAGGATTTCTTGTCTGCAAGAAAAAGATGGCGACTTCCCCTGAAACTTTGTGCTGCTTCTGTCCTCAACCTTTCCGACAATTTGTTGAATATGTggtaaatttgaagtttgatgAAGAACCAAATTATGCCAAGTATATATCCCTTTTTGATGGAATTGTTGGTCCAAATCCAGACATCAGACCGATTAATACAGAGGGTGCTCAAAAGctTATATGTCAGGTTGGGCATAAGAGAGGAAGATTGACCATGGAAGAGGAGGATGATGAACAACCAAAGAAGAAGATTAGAATGGGAATGCCAGCAACACAGTGGATTAGTATTTATAATGCCCGCCGACCAATGAAACAAAGGTATCATTACAATGTTGCAGATGTGCGTCTGTCTCAGCACATTgagaaaggaaatgaagatGGGTTATTCATCAGCAGTGTGGCTTCTTGTTCCAATCTTTGGGCACTTATAATGGATGCTGGCACTGGTTTCACTGCTCAAGTTTATGAACTCTCATCGCACTTTCTTCACAAGGAATGGATAATGGAACAGTGGGAAAAGAATTACTACATCAGTGCCATAGCAGGAGCTAATAATGGGAGCTCTTTGGTTGTTATGTCTAAAGGGACACAGTACTTACAGCAGTCATATAAAGTAAGTGATTCATTTCCATTCAAGTGgatcaataaaaaatggagagaaggGTTTTATGTCACTGCCATGGCCACCGCTGGAAGTAGATGGGCAATTGTTATGTCTCGTGGAGCCGGATTTTCTGACCAGGTTGTGGAGCTTGATTTTTTGTATCCCAGTGAAGGTATTCATCGAAGGTGGGATAGTGGTTACCGTATCACATCGACTGCTGCGACCTGGGACCAAGCTGCTTTTGTTCTCAGTGTCCCAAGAAGAAAACCTGCTGATGAAACTCAAGAGACACTGCGTACCTCTGCTTTCCCCAGTACTCATGTGAAGGAAAAATGGGCTAAAAACCTTTATATTGCTTCTATTTGTTATGGGAGAACAGTTTCATG 2138 0.4443 MPELRSRARRNRALDNPNPNPISQQHPPGHQVDRPAVRTRQRRRTSQNRRIRKQKNTIGVDETNRILNKGFGTVPETRTFKDKKEDREDQPPEASLRVLREEVGEKAMDEYDSGDRSADKAPVAEDEGSTAPLPEKVQVGGSPVYRIDRKLGKGGFGQVYVGRRVGATNLNERTGAGAVEVALKFEHRSSKGCNYGPPNEWQVYNALGGSHGVPRVHYKGRQGDYYVMVMDMLGPSLWDVWNNNSHSMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTADEKKLFLVDLGLATRWRDNSTGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLVFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLCCFCPQPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTEGAQKLICQVGHKRGRLTMEEEDDEQPKKKIRMGMPATQWISIYNARRPMKQRYHYNVADVRLSQHIEKGNEDGLFISSVASCSNLWALIMDAGTGFTAQVYELSSHFLHKEWIMEQWEKNYYISAIAGANNGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTAMATAGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDSGYRITSTAATWDQAAFVLSVPRRKPADETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVS 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00163 712 PANTHER CASEIN KINASE-RELATED 98 686 - -
Bva10g00163 712 PANTHER - 98 686 - -
Bva10g00163 712 SUPERFAMILY Protein kinase-like (PK-like) 145 425 IPR011009 -
Bva10g00163 712 ProSitePatterns Protein kinases ATP-binding region signature. 151 184 IPR017441 GO:0005524
Bva10g00163 712 CDD STKc_CK1 145 421 - -
Bva10g00163 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Bva10g00163 712 ProSiteProfiles Protein kinase domain profile. 145 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00163 712 MobiDBLite consensus disorder prediction 76 123 - -
Bva10g00163 712 MobiDBLite consensus disorder prediction 1 137 - -
Bva10g00163 712 SMART serkin_6 145 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00163 712 Pfam Protein kinase domain 145 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00163 712 Gene3D Transferase(Phosphotransferase) domain 1 113 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00163 Bva-Chr10 3109927 3115972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00163 150 421 MAP Kinase Kinase Kinase AT5G50180 24.211 4.74e-09 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Bva10g00163 Pkinase 2.7e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00163 - - zju:107420390 1266.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00163 10 3109927 3115972 Bva10g00163 10 3109927 3115972 ECH
Bva10g00163 10 3109927 3115972 Bva06g02567 06 16230505 16237086 ECH