Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00158 ATGTCCAAAATACCCCTCACTTTGTCACtccatttcttcctctttctctgcGTTTCAGTGCCCTGGCAGGTAAATTCACAGCCTACCAGCACCGAGCAAGAAATCCTACTGGAGATTAAACAGCAACTCGGTGATCCACCGTCGATTGGATCGTGGAACGCATCATCCTCGCCGTGTCATTGGCCGGAGATCAACTGCACTGAAGGTACAGTCACCGCGATCCAACTCTCGGGCAAAAACATCAACAGAGTTTTACCGGCAACAATATGCGACCTCAAGAACCTGGCATATCTCGACGTCTCAAACAATGATATCCCCGGCGAGTTCCCAACATCCTTGTACAACTGCTCAAACCTCCAAATTCTCTACCTGTCTCAGAACTACTTTGTCGGCCCAATCCCCGACGACATTGACCGACTCAAAACTCTAAGATACATAGACCTCGGCGGAAACAATTTCTCCGGTGACATTCCAGCTGCTATTGGGAAACTGACGGAGTTACAAAGGCTGCTCCTCTATAGGAATGAGTTCAACGGCACATTTCCCAAGGAAATCGGAGACCTGTCGAATCTTGAAATCCTGGGTATGGCCTATAATCGCAAGTTTGTGCCCATGGCGATCCCACCAGAGTTCGGAAAGTTGAAGAAGTTGAGGACCATCTGGATGACATGGTGCAATTTGATCGGAGAAATTCCTCAAAGCTTTTCCAATCTTACCAATCTTGAGCTAATGGATTTGTCGGCTAACAATTTGACAGGCAACATTCCAAGTAGCTTGTTCTCGCTAAGAAATTTAACGTCTCTGTTTCtataccaaaataaattgtCGGGTGAGCTACCCACTTCGATCCAGGCCTTGAATTTGACTCAAATTGATCTGGCAATGAACAATCTTACTGGTATGATTCCTCAAGAATTTGGGAACTTGAAGAATTTGGTGGTACTGCACCTGTATTATAATGAACTATCCGGTCCAATTCCAACGGATTTAGGCCAAATCCAAACGCTCCACACTTTCAGGGTATTTAACAACAAGTTGAATGGTACTCTGCCGGCAGACTTTGGTCGATATTCCAAGCTTGTATACTTTGAAGTTGGAAATAATCAACTAAGCGGTGGGTTGCCAGAATATTTATGTGAAGGAGGTTCTTTGCAAGGACTAATCGCTTTCTCTAACAATCTCATCGGAAGCTTGCCCAGTGGGCTTGGAAATTGTCCATCTTTGGTTTCTCTTAATATttacaataacaatttttcCGGTGAGATTCCTTTGGGTCTTTGGACTTCCTGGAACCTAACTACCTTGAAGCTAAGTGGAAACTCATTTTCTGGTCAACTTCCCAATAAACTAGCTTGGAATTTGTCCAGAGTGGAGATCAACGACAACGAGTTTTCAGGTCAATTATCTACTgattttttctcctctctaaATTTAGTGGTTTTTGAAGCAAGAAACAACTTCTTTTCTGGTGAGATTCCAAGGGAATTGACCAATGTTTCTCGGCTAAATTCTCTCGTGCTTGATGGGAATCAACTTTCTGGTGAACTTCCAACGGTGATGATCTCCTGGGAATCCCTCAACACTTTAACTCTCTCAAGAAACAAACTTTCCGGTCAAATTCCACTAGCTATTATTCGTCTCTCTAACCTTGTTTACTTGGACTTGTcagaaaatgatatttctgGTGAAATCCCACCTCAGCTTGGCAATTTGAGGCTCGTTTTCCTCAACTTGTCCTCCAACAGGCTTTCCGGGAGAATCCCAGATGAGTTTAACAACCTTGCATATGAAAATAGTTTCCTCAACAATCCTAATTTATGTGCCAATAATCCAAATctcaagcttcaaagctgCTTAACCAAACCTCCCCACTCAAAAAAATCATCTTCCAAATacatttactttgtttttgttcttctcattGTTGTGATGGTGGCCACTGTTTCACTGATCTGCTATAAGTTCAGAGGCTCCTTCAGTAGAAAGCCTTGTAAGCGTGACCTCTCAACATGGAGGCTTACTTCATTCCAGAGGCTAGATCTCTCAGAAATGAATCTTTTCTCAAACTTGACCGATAACAACCTTATTGGAAGCGGGGGTGCAGGGAGAGTTTACAGGGTTGCTTCCAATCACCCAGGTGAATATGTTGCTGTAAAAAGGATTTGGAATTGCGAGAAACTGGATCAAAAGCTCGAGAAAGAGTTCATGGCTGAGGTTGAAATCCTGGGTTCAATTCGGCATTCCAATATAGTTAAGCTTTTGTGTTGCTTTTCAAGTGAGAATTGCAAACTCCTTGTCTATGAATACATGGAAAACCAGAGCCTGGACAGATGGCTTCGTGGAACGAATAGAAAATCAGCAACTGGGTTGAGTTCGCGGAACAATGGTTTCATCTTGAATTGGCCGAAAAGGTTGAAAATAGCCATTGGAGCAGCACAAGGTTTATGCTACATGCACCATGATTGCTCGCCGCCAATCATCCACCGAGATGTCAAGTCCAGCAACATATTGCTGGATTGTGAGTTCAGGGCGAGTATTGCAGATTTTGGACTAGCAAAAATTTTGGCTAAGCATGGGGAGCCTAATACCATGTCTGTCATTGCCGGGTCTTTTGGATATATTGCACCAGAATATGCTTATTCAATGAAGGTCAACGAGAAAGTTGATGTATACAGTTTTGGAGTGGTTCTGCTAGAACTTATTACTGGAAAACTACCTAATAATGGAGACGAGCAGATAAGCCTGGCAGATTGGGCATGGCGGCATTACAGTGAAGGCAAGCCCTTTGCTGATGCTCTTGatgaagaaatcaaagaagCATGCCATTTGGAAGCCATGATTACTGTCTTCAAATTAGGCCTTATTTGTACCAGCACATCACCCTCAACGAGGCCATCCATGAAAGAGATTTTGCAGGGTCTTCGTCAGTGCTGTCCTCAAGAAAGTtatggagagaaaaagaggagAACTGAGTTTGATTTTACTCCCCTTCTTAGTGATGCCACCTACATTTCTAGTTATAAGGATAGTAATAGAGCTATGAACGAAAACGATGTCAGCAGCTTGTATTCAGTGTA 3077 0.4111 MSKIPLTLSLHFFLFLCVSVPWQVNSQPTSTEQEILLEIKQQLGDPPSIGSWNASSSPCHWPEINCTEGTVTAIQLSGKNINRVLPATICDLKNLAYLDVSNNDIPGEFPTSLYNCSNLQILYLSQNYFVGPIPDDIDRLKTLRYIDLGGNNFSGDIPAAIGKLTELQRLLLYRNEFNGTFPKEIGDLSNLEILGMAYNRKFVPMAIPPEFGKLKKLRTIWMTWCNLIGEIPQSFSNLTNLELMDLSANNLTGNIPSSLFSLRNLTSLFLYQNKLSGELPTSIQALNLTQIDLAMNNLTGMIPQEFGNLKNLVVLHLYYNELSGPIPTDLGQIQTLHTFRVFNNKLNGTLPADFGRYSKLVYFEVGNNQLSGGLPEYLCEGGSLQGLIAFSNNLIGSLPSGLGNCPSLVSLNIYNNNFSGEIPLGLWTSWNLTTLKLSGNSFSGQLPNKLAWNLSRVEINDNEFSGQLSTDFFSSLNLVVFEARNNFFSGEIPRELTNVSRLNSLVLDGNQLSGELPTVMISWESLNTLTLSRNKLSGQIPLAIIRLSNLVYLDLSENDISGEIPPQLGNLRLVFLNLSSNRLSGRIPDEFNNLAYENSFLNNPNLCANNPNLKLQSCLTKPPHSKKSSSKYIYFVFVLLIVVMVATVSLICYKFRGSFSRKPCKRDLSTWRLTSFQRLDLSEMNLFSNLTDNNLIGSGGAGRVYRVASNHPGEYVAVKRIWNCEKLDQKLEKEFMAEVEILGSIRHSNIVKLLCCFSSENCKLLVYEYMENQSLDRWLRGTNRKSATGLSSRNNGFILNWPKRLKIAIGAAQGLCYMHHDCSPPIIHRDVKSSNILLDCEFRASIADFGLAKILAKHGEPNTMSVIAGSFGYIAPEYAYSMKVNEKVDVYSFGVVLLELITGKLPNNGDEQISLADWAWRHYSEGKPFADALDEEIKEACHLEAMITVFKLGLICTSTSPSTRPSMKEILQGLRQCCPQESYGEKKRRTEFDFTPLLSDATYISSYKDSNRAMNENDVSSLYSV 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00158 1025 Gene3D Ribonuclease Inhibitor 454 697 IPR032675 -
Bva10g00158 1025 Gene3D Ribonuclease Inhibitor 29 202 IPR032675 -
Bva10g00158 1025 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 13 992 - -
Bva10g00158 1025 ProSiteProfiles Protein kinase domain profile. 690 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00158 1025 SUPERFAMILY Protein kinase-like (PK-like) 683 974 IPR011009 -
Bva10g00158 1025 Gene3D Ribonuclease Inhibitor 379 453 IPR032675 -
Bva10g00158 1025 SMART LRR_typ_2 547 571 IPR003591 -
Bva10g00158 1025 SMART LRR_typ_2 309 333 IPR003591 -
Bva10g00158 1025 SMART LRR_typ_2 164 188 IPR003591 -
Bva10g00158 1025 SMART LRR_typ_2 92 116 IPR003591 -
Bva10g00158 1025 SMART LRR_typ_2 238 262 IPR003591 -
Bva10g00158 1025 SMART serkin_6 690 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00158 1025 Pfam Leucine rich repeat 225 275 IPR001611 GO:0005515
Bva10g00158 1025 Gene3D Ribonuclease Inhibitor 289 378 IPR032675 -
Bva10g00158 1025 SMART LRR_sd22_2 262 288 - -
Bva10g00158 1025 SMART LRR_sd22_2 92 118 - -
Bva10g00158 1025 SMART LRR_sd22_2 214 240 - -
Bva10g00158 1025 SMART LRR_sd22_2 547 573 - -
Bva10g00158 1025 Pfam Protein kinase domain 692 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00158 1025 Gene3D Ribonuclease Inhibitor 203 288 IPR032675 -
Bva10g00158 1025 SUPERFAMILY RNI-like 255 609 - -
Bva10g00158 1025 Pfam Leucine rich repeat N-terminal domain 32 66 IPR013210 -
Bva10g00158 1025 ProSitePatterns Serine/Threonine protein kinases active-site signature. 826 838 IPR008271 GO:0004672|GO:0006468
Bva10g00158 1025 Gene3D Transferase(Phosphotransferase) domain 1 771 997 - -
Bva10g00158 1025 SUPERFAMILY L domain-like 46 371 - -
Bva10g00158 1025 PANTHER KINASE FAMILY WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 13 992 - -
Bva10g00158 1025 Gene3D Phosphorylase Kinase; domain 1 698 770 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00158 Bva-Chr10 3081663 3085101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00158 18 1017 Receptor kinase-like Gene Family AT5G25930 55.334 0.0 1082
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva10g00158 Pkinase 3.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00158 K00924 - gmx:100790817 1300.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00158 10 3081663 3085101 Bva10g00158 10 3081663 3085101 ECH