Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00153 ATGTCGTGGCAACAGTACGTAGATGAGCACTTAATGTGCTATATTGAAGGCAATAGGCTCGCCGCTGCAGCAATTATCGGCCACGACGGCACCGTTTGGGCACAGAGCTCTACCTTCCCTCAGTTTAAGCCCGAGGAAATAACTGCCATCATGAATGATTTTGCTGAACCTGGTACACTTGCTCCAACTGGCTTACACCTTGGTGGAACTAAGTATATGGTGATTCAAGGTGAACCAGGCGCTGTCATTAGAGGAAAGAAGGGCTCTGGCGGCATCACTATTAAGAAGACAAATATGGCGTTAATAATTGGTATTTATGAGGAGCCTTTGACTCCTGGTCAGTGCAACATGATTGTTGAAAGGTTGGGTGATTACCTAATTGAACAGGGCCTCTA 395 0.4633 MSWQQYVDEHLMCYIEGNRLAAAAIIGHDGTVWAQSSTFPQFKPEEITAIMNDFAEPGTLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTNMALIIGIYEEPLTPGQCNMIVERLGDYLIEQGL 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00153 131 PRINTS Profilin signature 21 30 IPR005455 GO:0003779
Bva10g00153 131 PRINTS Profilin signature 113 130 IPR005455 GO:0003779
Bva10g00153 131 PRINTS Profilin signature 64 78 IPR005455 GO:0003779
Bva10g00153 131 PRINTS Profilin signature 100 113 IPR005455 GO:0003779
Bva10g00153 131 PRINTS Profilin signature 3 12 IPR005455 GO:0003779
Bva10g00153 131 PRINTS Profilin signature 40 60 IPR005455 GO:0003779
Bva10g00153 131 CDD PROF 2 130 IPR005455 GO:0003779
Bva10g00153 131 SMART prof_2 1 131 IPR005455 GO:0003779
Bva10g00153 131 Pfam Profilin 1 130 IPR005455 GO:0003779
Bva10g00153 131 PANTHER PROFILIN 1 131 IPR005455 GO:0003779
Bva10g00153 131 SUPERFAMILY Profilin (actin-binding protein) 2 130 IPR036140 -
Bva10g00153 131 Gene3D Dynein light chain 2a, cytoplasmic 1 131 - -
Bva10g00153 131 PANTHER PROFILIN 1 131 - -
Bva10g00153 131 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
Bva10g00153 131 PRINTS Plant profilin signature 84 99 IPR005455 GO:0003779
Bva10g00153 131 PRINTS Plant profilin signature 52 66 IPR005455 GO:0003779
Bva10g00153 131 PRINTS Plant profilin signature 117 130 IPR005455 GO:0003779
Bva10g00153 131 PRINTS Plant profilin signature 104 117 IPR005455 GO:0003779
Bva10g00153 131 PRINTS Plant profilin signature 27 40 IPR005455 GO:0003779
Bva10g00153 131 PRINTS Plant profilin signature 1 13 IPR005455 GO:0003779
Bva10g00153 131 PRINTS Plant profilin signature 71 80 IPR005455 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00153 Bva-Chr10 3057153 3058992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00153 1 131 Cytoskeleton Gene Families AT4G29340 73.134 3.70e-72 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00153 K05759 - qsu:111995052 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00153 10 3057153 3058992 Bva10g00153 10 3057153 3058992 ECH
Bva10g00153 10 3057153 3058992 Bva06g02577 06 16282464 16283505 ECH
Bva03g00528 03 3065620 3067883 Bva10g00153 10 3057153 3058992 ECH
Bva04g00690 04 4572800 4574878 Bva10g00153 10 3057153 3058992 ECH