Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00133 ATGGATCgtgaattcattttctttcttattgtaGTAGTCATTACTTACATGTCCCATATTACACAAGCCATCAGTGCCACTGCCAACCAgtctgaatttttttctctaatgaaAGAGTCTCTCACGGGGAACTATCCACCTGATTGGGATGTCACAGGACGGAAATCAGTCTGCAACTTCACCGGAGTTAGCTGCAACAATCAAGGGGATGTCATCAAGGTTGATGTCTCCGGCTGGTCACTTTCTGGTAACTTCCCATCAGATATGTGCTCTTACATGCCAGAGTTACGTGTTCTCAATCTCAGCCATAACCAGCTCAGAGGGAATTTTCTCGACAGCATAGTCAACTGTTCTCTCTTGGAACAGCTAAACATGACTCATGTGAATCACACTGGAACACTTCCAGATTTCTCGCCTATGAAGTTTCTTAGGATCCTTGATTTCTCATACAATCTCTTTACTGGTCAATTCCCCATGTCAGTATTTAATCTCACAAACATTGAGGTGCTTAACTTCAATGAGAATGGTGGTTTCAACCGGTGGAGAATGCCGGGGGATATTAACAGGTTGAAAAAGCTCAAGTCTGCGTTTTTGACGACATGCATGCTGGCTGGGCAAATCCCGCCATCAATAGGGAACATTACGTCCCTTGTCGATCTTGAGTTGACTGGAAATTTCCTCACCGGTCAAATTCCTAAAGAGCTTGGGTTGCTGAAAAACCTGCAGTTACTTGAGCTATATTACAACCAACTCGTAGGCAATATACCAGACGAGCTGGGAAATCTAACCGAGCTCACAGATTTGGATATGTCAGTCAATAAGCTGACTGGAAGCATCCCAGGATCAGTATGGCGCCTCCCCAAACTGGAAGTCTTGCAGTTTTACAACAATAGCCTCACAGGAGAAATCCCGGATGTGATAGCAAACTCAACAACcttgaaaatattatctctTTATGGCAACTCCCTGAGTGGAGTAGTTCCTATAAATCTGGGTAAAAACTCGGGACTGTTAGTCCTAGACTTGTCCGAAAACAATCTCACTGGTCCATTGCCAACAGAGGTTTGCAACAGAGGTAAACTGCTCTACTTTCTTGTTCTGGATAATATGTTCTCCGGACAGCTACCCGACAGTTATTCGAGATGTTTGTCTCTTTTGAGGTTTCGGGTCAGTAATAACCGTTTGGAGGGCTCAATTCCCGAGGGGCTTCTTGCTCTACCACACGTTTCAATCATTGATTTAAGTAACAATAATTTCACTGGTCCAATCTCTTGGACAATTGGAAATTGTAGGAACCTGTCAGAACTGTTTTTACAGCAAAACGGGTTTACCGGGGTTATACCTCCTACAATCTCACATGCTTTTAATCTGGTCAAGATTGATTTAAGTTATAACCTTCTGTCTGGTGTAGTTCCTTCTGAAATTGGCTACATGAGAAAGCTTAATTTGCTCATGTTGCAAGGGAACAAGCTAAATTCTTCTATACCCAATTCCCTTTCCTTGTTGAAGACTCTCAACGTTCTTGATCTCTCCAACAACCTTCTGTCAGGAAACATCCCTGAAAATCTCTCTCAACTGCTAACCACTTCTATCAACTTATCCAATAATTTGCTTTCTGGTCCAATTCCTCTCTCATTGATAAAAGGAGGATTAGTAGAAAGCTTTTCTGGGAACCCAGATCTGTGTGTTCCCTATGCTAACTCATCATACCAGAAGTTTCCCGCATGTCCACAGACTAACAACAGAAAGAGGCTAAATACCATATGGGTAGCTGGGATTTCAGTAGTTTTAATCATCATTGGAGCTGTCTTGTTTCTAAAACGTAGGTGTAGCAAAGAGAGAGCTGCGGTGGAACATGATGAGACACTTTCTTCATCCTTCTTCTCTTACGAGGTGAAGAGTTTTCACAAAGTATCTTTCGACCGGCAGGAGATCACGGAAGCGATGGCCGATAAGAACATAGTGGGGCGTGGTTCGTCTGGGACAGTGCACAAGATTGCGCTGAAAAACGGTGAATTTGTTGCAGTCAAGAAGCTGTGGAGTCGGAAAACAAAGGATTCGGCTCCTGAGGATGGATTAGTTTTGGACAAGACCTTGAAAACAGAGGTCGAGACCCTGGGAAGTGTAAGACATAAGAACATAGTCAAATTGTACTGCTACTTCTCTAGTTTGGACTGCAGCCTCTTGGTTTATGAGTATATGCCAAATGGTAATCTTTGGGATGCCCTGCACAAGGGTTGGATCCAGTTGGATTGGCCTATTCGCCATCAGATTGCCCTGGGCATTGCACAGGGTCTGGCATACCTCCACCACGATTTGCTACCTCCTATCATACACCGAGATATCAAGTCAACCAACATCCTATTGGATGTTAACTACAAGCCCAAGGTTGCAGATTTTGGAATCGCCAAGGTTTTACAAGCAAGAGGAGGGAAGGATTTCACAACAACTGTTATTGCAGGAACGTATGGTTACTTAGCTCCAGAATATGCATATTCAGCCAGAGCAACAACCAAGTGTGATGTCTACAGTTTTGGGGTGATTCTAATGGAACTTGTTACTGGGAAGAAGCCGGTGGAGGCTGAATTTGGAGAGAATAGAAATATTGTGTATTGGGTGTCAAACAAAATGGACAGCAAGGACGGAGCTAGTGAGGTATTAGACAAGCGATTATATGGGTCATTCAAGGCAGATATGATTCAAGTGCTCCGAATTGCCATCCGCTGCACCTACAAAGCCCCAGCTAATCGACCAACCATGAAAGAGGTAGTTCAGCTGCTAACCGAGGCAGATCCATGCAGATTCGACTCCTCCATGTTGTCAGATAACAATAAGACCAAAGAGATATCAAATGTCACCATAGTAAAGAACCCATTTGAGTTATA 2885 0.4277 MDREFIFFLIVVVITYMSHITQAISATANQSEFFSLMKESLTGNYPPDWDVTGRKSVCNFTGVSCNNQGDVIKVDVSGWSLSGNFPSDMCSYMPELRVLNLSHNQLRGNFLDSIVNCSLLEQLNMTHVNHTGTLPDFSPMKFLRILDFSYNLFTGQFPMSVFNLTNIEVLNFNENGGFNRWRMPGDINRLKKLKSAFLTTCMLAGQIPPSIGNITSLVDLELTGNFLTGQIPKELGLLKNLQLLELYYNQLVGNIPDELGNLTELTDLDMSVNKLTGSIPGSVWRLPKLEVLQFYNNSLTGEIPDVIANSTTLKILSLYGNSLSGVVPINLGKNSGLLVLDLSENNLTGPLPTEVCNRGKLLYFLVLDNMFSGQLPDSYSRCLSLLRFRVSNNRLEGSIPEGLLALPHVSIIDLSNNNFTGPISWTIGNCRNLSELFLQQNGFTGVIPPTISHAFNLVKIDLSYNLLSGVVPSEIGYMRKLNLLMLQGNKLNSSIPNSLSLLKTLNVLDLSNNLLSGNIPENLSQLLTTSINLSNNLLSGPIPLSLIKGGLVESFSGNPDLCVPYANSSYQKFPACPQTNNRKRLNTIWVAGISVVLIIIGAVLFLKRRCSKERAAVEHDETLSSSFFSYEVKSFHKVSFDRQEITEAMADKNIVGRGSSGTVHKIALKNGEFVAVKKLWSRKTKDSAPEDGLVLDKTLKTEVETLGSVRHKNIVKLYCYFSSLDCSLLVYEYMPNGNLWDALHKGWIQLDWPIRHQIALGIAQGLAYLHHDLLPPIIHRDIKSTNILLDVNYKPKVADFGIAKVLQARGGKDFTTTVIAGTYGYLAPEYAYSARATTKCDVYSFGVILMELVTGKKPVEAEFGENRNIVYWVSNKMDSKDGASEVLDKRLYGSFKADMIQVLRIAIRCTYKAPANRPTMKEVVQLLTEADPCRFDSSMLSDNNKTKEISNVTIVKNPFEL 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00133 961 ProSiteProfiles Protein kinase domain profile. 649 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00133 961 Gene3D Ribonuclease Inhibitor 283 583 IPR032675 -
Bva10g00133 961 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 7 948 - -
Bva10g00133 961 Pfam Protein kinase domain 651 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00133 961 Gene3D Ribonuclease Inhibitor 181 282 IPR032675 -
Bva10g00133 961 SMART LRR_typ_2 502 526 IPR003591 -
Bva10g00133 961 SMART LRR_typ_2 286 310 IPR003591 -
Bva10g00133 961 SMART LRR_typ_2 238 262 IPR003591 -
Bva10g00133 961 SMART LRR_typ_2 93 118 IPR003591 -
Bva10g00133 961 SMART LRR_typ_2 478 501 IPR003591 -
Bva10g00133 961 Gene3D Phosphorylase Kinase; domain 1 631 733 - -
Bva10g00133 961 ProSitePatterns Serine/Threonine protein kinases active-site signature. 777 789 IPR008271 GO:0004672|GO:0006468
Bva10g00133 961 SUPERFAMILY Protein kinase-like (PK-like) 636 927 IPR011009 -
Bva10g00133 961 Pfam Leucine rich repeat 431 491 IPR001611 GO:0005515
Bva10g00133 961 SUPERFAMILY L domain-like 185 424 - -
Bva10g00133 961 ProSitePatterns Protein kinases ATP-binding region signature. 655 678 IPR017441 GO:0005524
Bva10g00133 961 PRINTS Leucine-rich repeat signature 502 515 - -
Bva10g00133 961 PRINTS Leucine-rich repeat signature 337 350 - -
Bva10g00133 961 SUPERFAMILY L domain-like 55 230 - -
Bva10g00133 961 SUPERFAMILY L domain-like 391 546 - -
Bva10g00133 961 SMART serkin_6 649 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00133 961 Gene3D Ribonuclease Inhibitor 32 180 IPR032675 -
Bva10g00133 961 Gene3D Transferase(Phosphotransferase) domain 1 734 951 - -
Bva10g00133 961 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 948 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00133 Bva-Chr10 2937881 2941956 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00133 18 932 Receptor kinase-like Gene Family AT5G49660 64.821 0.0 1203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva10g00133 Pkinase 4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00133 - - lja:Lj1g3v2096140.1 1338.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00133 10 2937881 2941956 Bva10g00133 10 2937881 2941956 ECH