Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00130 ATGCCGAATCCAGAGTCTCACCGTCACCGGTCCAGAGCTCGACCGTCGTCGGCGCGGCAGCCGGTTCGGGTTAGAGTTCCACTGACGCAGTTACTGAAGGTGGCTTCGGTTGCAGGTGGTATTCAATTTGGTTGGGCTTTGCAGCTCTCTCTGTTGACGCCATATGTGCAGCAGCTGGGAATTCCACACGCTTGGGCCAGCATCATATGGCTCTGCGGTCCCCTATCTGGTCTACTTGTTCAGCCCTTGGTGGGCCACATGAGTGATCGGTGTACCAGTCGCTTTGGCCGCCGGAGACCGTTTATCTTAGGCGGAGCACTGTCGATCATCTTGTCGGTTGTGATCATTGGTTACTCTGCAGACATTGGTTGGATGTTCGGCGACACGGTCAATTCTAGACCCCGAGCTTTGGCGGTTTTCATATTCGGGTTTTGGATATTGGATGTGGCTAATAATATGACTCAGGGTCCTTGCAGAGCTTTGCTTGCTGATCTCACCGCCAAGGATCATCGAAGAACACGAGTGGCAAATGCTTATTATTCTCTGTTTATGGCTATTGGTAACGTTCTTGGATATGCAACTGGATCCTACAGTGGCTGGTACaaggttttttctttcacgTATACTCCTGCCTGCAATGCTAGTTGTGCAAATCTCAAGTCTGCTTTCCTTCTGGATGTTGCTTTCATTGCTGTCACAACATATATCAGCATAACAGCAGCCCATGAAGTGCCTCTAAGTTTGAGTGGGACAGCCCATGTTGAAGAAGGCGAGGGGGGTCGTGCTGAAGAAGCTTTCCTGTGGGAGCTATTTGGGACATTCAGATATTTTTCGGCTCCAATATGGACAATACTATTAGTTACTGCTCTAACGTGGGTTGGATGGTTTCCGTTTCTTCTCTTTGATACTGATTGGATGGGTCGAGAGATATACGGTGGTGAGCCAAATGAGGGCCCTAATTATGATGCTGGAGTCAGAATGGGGGCTCTTGGTTTAATGCTGAATTCAGTTGTTCTTGGAATTACATCAGTGCTCATGGAATGGCTATGCAGGAAGTGGGGAGCTGGCTTCGTGTGGGGAATCTCAAACATACTAATGGCTGTCAGCTTTTTTGCAATGCTTGTAATAACCTATGTGGCGAATAACATTGGTTATGTAGGCAAAGATCTACCACCAGTTGGCATTGTGGTAGCTGCATTGATAGTTTTTTCTGTTCTTGGATTACCATTAGCTATCACTTACAGTGTTCCATATGCCTTAATTTCCACACGTATTGAGTCTTTAGGACTTGGCCAAGGGTTATCAATGGGCGTCCTAAATTTGGCAATAGTGATCCCACAGATGGTAGTCTCCCTGGGAAGTGGACCTTGGGATCAACTATTTGGTGGAGGAAACTCTCCAGCCTTTGCTGTTGCGGCTGTTGCAGCCCTTGTCAGTGGACTCATAGCCGTCCTGGCAATTCCTCGAAGTGGTAGTGCTCAAAAGACTGGGGCTCAAAAGACTAGAACCCACGTATG 1517 0.4766 MPNPESHRHRSRARPSSARQPVRVRVPLTQLLKVASVAGGIQFGWALQLSLLTPYVQQLGIPHAWASIIWLCGPLSGLLVQPLVGHMSDRCTSRFGRRRPFILGGALSIILSVVIIGYSADIGWMFGDTVNSRPRALAVFIFGFWILDVANNMTQGPCRALLADLTAKDHRRTRVANAYYSLFMAIGNVLGYATGSYSGWYKVFSFTYTPACNASCANLKSAFLLDVAFIAVTTYISITAAHEVPLSLSGTAHVEEGEGGRAEEAFLWELFGTFRYFSAPIWTILLVTALTWVGWFPFLLFDTDWMGREIYGGEPNEGPNYDAGVRMGALGLMLNSVVLGITSVLMEWLCRKWGAGFVWGISNILMAVSFFAMLVITYVANNIGYVGKDLPPVGIVVAALIVFSVLGLPLAITYSVPYALISTRIESLGLGQGLSMGVLNLAIVIPQMVVSLGSGPWDQLFGGGNSPAFAVAAVAALVSGLIAVLAIPRSGSAQKTGAQKTRTHV 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00130 505 CDD MFS_SLC45_SUC 31 466 - -
Bva10g00130 505 SUPERFAMILY MFS general substrate transporter 31 490 IPR036259 -
Bva10g00130 505 MobiDBLite consensus disorder prediction 1 20 - -
Bva10g00130 505 Pfam MFS/sugar transport protein 46 193 - -
Bva10g00130 505 PANTHER SUGAR TRANSPORTER 8 495 - -
Bva10g00130 505 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 8 495 - -
Bva10g00130 505 Gene3D MFS general substrate transporter like domains 29 486 IPR036259 -
Bva10g00130 505 TIGRFAM GPH_sucrose: sucrose/H+ symporter 26 490 IPR005989 GO:0005887|GO:0008515|GO:0015770
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00130 Bva-Chr10 2908087 2916192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00130 5 490 Sucrose Transporter Gene Family AT1G09960 70.140 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00130 K15378 - gmx:100787939 802.357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00130 10 2908087 2916192 Bva10g00130 10 2908087 2916192 ECH