Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00125 ATGGGTACTGGTTGGAGAAGAGCCTTTTGCACTTTTGATCCTGAATCCACAATATCTGATAAGCAACAGAGGAGCCCAAGTCCTAGTCCGAGCCCCAGAAGCTGTGCTAGATTGGGTTTTCTAACCGGTGGTAGCAACCCGTCCACTCCACGCCTGCAGCAGCAACACCCTCAACCCGTCAACAGCCCAAGTTTGCGTTGCGGAACAATTGCTGAAGCAGCTCAAGCAGCAAACGACAGTCCCagaatacaaaacaaaagcacTCCCAAGGCAATCAAATCAGCCTCAAATCCAACGTCTCCGCGTTCCCCTTTGAAATTGTCTCTCTTCAAAAACAGCTTCAAATTCAGGAGTAGCTGTGGAATCTGTTTGAATAGCGTGAAAACGGGTCAGGGTACGGCCATTTACACCGCAGAATGTGCTCACGCTTTCCATTTCCCGTGTATCGCTTCCTATGTACGCAAGCATGGTAGCCTTGTCTGCCCCGTCTGCAACGCCACCTGGAAAGACGAATCATTACTTTCAGCACACAAGAACCTGGACTCAGAATTCGCAGAACCAAACGACAGCGTCGCTGAAAAGAGCATTGAGAAACCAAATGCCAGCAACGACAAAAAGAGAGCAGAAATCTCGTCCCCTGTATTCAAAACCAACCATGTTGAACAACAACAGCAGAGGCAACCGCAAATAAAGCATTCCGATTCAATCAGGTCCTACGATGACGACGAGCCTCTCCTATCTCCAACCTCTGGTGGAAGAATCATAACCATTCCGGAGGCAGACGAAAACGGTGAAGAGGAAGACGATGCCGAAGAATTCCAGGGCTTTTTCGTCAATCCTAAACCATCTTCTTCAACGAAATCCTACTTTCATGACTTGCAAAACGATAGAGATTCCAGGAATGTTCAGGTGAAGATGATGCCCGAGTGTGCACTAGTATCAGTCTCTCGGACCCACGAGACGTATGCTTTGGTTATAAGGGTCAAGGCTCctccgccgccgccgccgatGATAACTTCCTCCCGGAACAGCAATAATAATTCTACGCCACTTCTGGACCCGTCGCAGCGGGCACCTATAGATCTCGTTACTGTCCTTGATGTGAGCGGTAGCATGATTGGTGCCAAGCTGTTCATGCTAAAGCGCGCTATGCGTTTGGTCATTTCCTCGCTTGGCCCAGCCGATAGACTCTCCTTAGTGGCTTTCTCGGCTACACCTAAGCGGCTCATGCCATTGAGAAGAATGACCCCTCAAGGTCAGCGCGTGGCTCGGCGCATTATTGACCGGCTCGTGTGTGGCCAAGGCACTTGTGTGGGTGATGCCTTGAGGAAAGCGACCAAAGTGCTTGAGGATCGAAGAGAGAGAAACCCCGTGGCAAGTATCATGCTCTTATCGGACGGTCAAGATGAGAGAGTTCAAGCTAGCAATAACACCAATCAGCGGAAAACTGCAAGCCACATGTCTTCCACCCGATTCGCTCACATTGAAATTCCCGTTCATGCATTCGGGTTCGGACAGAAAGGTCGATACAGTCAAGAACCGGCTGAGGATGCATTTGCAAAGTGCGTAGGTGGTTTATTGAGTGTAGTAGTGCAGGACCTGAGAATTCAGCTTGGCTTTCAGTCGGCTTCGACACCGGCTGAAATTACCGCAATCTACTCATGCAGTGGACGGCCTACAGCACTGAGTTCAGGCTCCGTGCGGCTCGGCGATTTGTACGCCGAGGAGGAGAGAGAGTTGCTGGTGGAGCTGAGGGTCCCTAACTCGGCTCTGGGGACCCACCACGTGATGACGGCACGGTGCCTTTTTAAAGACCCGGCTAGTCAAGAGGTAGTATTCGGTATGGAACAGGCACTTCTTGTGCCGCCACCTCAGAGTGCTCGATCCTCCGGTACCGGTATCTGTACAAGAACCGAAAGGTTGAGAAATCTGTTCATAACAACCAGAGCCATAGCAGAATCACGGAGACTCGTAGAGCACAACGACTTCACAAGCGCTCATCATTTACTTTCATCGGCTCGGGCTCTTCTGATGCAGTCCAACTCCGTTTCGGCTAACGAGTACGTACGGGGATTGGAGGCCGAGCTGGCAGAACTACATTGGCGGAGACAACATCAGATGGAACAgcagatgatgatgatgcaaCGGAGGAGAGGGAACGATAGAGAGATGACTTTGGTGGACGAAAATGGTGAGCCGCTCACGCCAACGTCGGCTTGGAGAGCTGCTGAGAAGCTAGCTAAGGTGGCCATGATGAAGAAGTCATTGAATAAAGTCAGCGACTTGCACGGCTTCGAAAACGCTaggtttta 2312 0.4939 MGTGWRRAFCTFDPESTISDKQQRSPSPSPSPRSCARLGFLTGGSNPSTPRLQQQHPQPVNSPSLRCGTIAEAAQAANDSPRIQNKSTPKAIKSASNPTSPRSPLKLSLFKNSFKFRSSCGICLNSVKTGQGTAIYTAECAHAFHFPCIASYVRKHGSLVCPVCNATWKDESLLSAHKNLDSEFAEPNDSVAEKSIEKPNASNDKKRAEISSPVFKTNHVEQQQQRQPQIKHSDSIRSYDDDEPLLSPTSGGRIITIPEADENGEEEDDAEEFQGFFVNPKPSSSTKSYFHDLQNDRDSRNVQVKMMPECALVSVSRTHETYALVIRVKAPPPPPPMITSSRNSNNNSTPLLDPSQRAPIDLVTVLDVSGSMIGAKLFMLKRAMRLVISSLGPADRLSLVAFSATPKRLMPLRRMTPQGQRVARRIIDRLVCGQGTCVGDALRKATKVLEDRRERNPVASIMLLSDGQDERVQASNNTNQRKTASHMSSTRFAHIEIPVHAFGFGQKGRYSQEPAEDAFAKCVGGLLSVVVQDLRIQLGFQSASTPAEITAIYSCSGRPTALSSGSVRLGDLYAEEERELLVELRVPNSALGTHHVMTARCLFKDPASQEVVFGMEQALLVPPPQSARSSGTGICTRTERLRNLFITTRAIAESRRLVEHNDFTSAHHLLSSARALLMQSNSVSANEYVRGLEAELAELHWRRQHQMEQQMMMMQRRRGNDREMTLVDENGEPLTPTSAWRAAEKLAKVAMMKKSLNKVSDLHGFENARF 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00125 770 MobiDBLite consensus disorder prediction 41 65 - -
Bva10g00125 770 MobiDBLite consensus disorder prediction 333 354 - -
Bva10g00125 770 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 115 239 IPR013083 -
Bva10g00125 770 CDD RING-H2 120 165 - -
Bva10g00125 770 MobiDBLite consensus disorder prediction 215 232 - -
Bva10g00125 770 Pfam von Willebrand factor type A domain 362 468 IPR002035 -
Bva10g00125 770 ProSiteProfiles VWFA domain profile. 361 506 IPR002035 -
Bva10g00125 770 SUPERFAMILY RING/U-box 114 169 - -
Bva10g00125 770 SMART ring_2 120 164 IPR001841 -
Bva10g00125 770 MobiDBLite consensus disorder prediction 78 103 - -
Bva10g00125 770 CDD vWA_C3HC4_type 360 531 - -
Bva10g00125 770 PANTHER E3 UBIQUITIN-PROTEIN LIGASE WAV3 3 770 - -
Bva10g00125 770 MobiDBLite consensus disorder prediction 185 254 - -
Bva10g00125 770 MobiDBLite consensus disorder prediction 340 354 - -
Bva10g00125 770 Pfam RING-like zinc finger 120 149 IPR001841 -
Bva10g00125 770 MobiDBLite consensus disorder prediction 185 212 - -
Bva10g00125 770 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 3 770 - -
Bva10g00125 770 Gene3D von Willebrand factor, type A domain 361 533 IPR036465 -
Bva10g00125 770 SUPERFAMILY vWA-like 359 535 IPR036465 -
Bva10g00125 770 MobiDBLite consensus disorder prediction 1 103 - -
Bva10g00125 770 ProSiteProfiles Zinc finger RING-type profile. 120 165 IPR001841 -
Bva10g00125 770 MobiDBLite consensus disorder prediction 15 32 - -
Bva10g00125 770 SMART VWA_4 359 544 IPR002035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00125 Bva-Chr10 2853358 2857676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00125 119 164 C3H Transcription Factor Family AT5G66070 41.304 2.97e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00125 - - lja:Lj3g3v3131860.1 1045.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00125 10 2853358 2857676 Bva10g00125 10 2853358 2857676 ECH