Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00088 ATGCCATCTTCAACTGCTCTTCAATGGCTAAGCCTTGTGGGTATCATATGGCTCCAAGCCATTAACGGCACAAACACCGATTTCCCAGCTTACTCCTCCCAATTGAAGCAGTTTCTTTCAATGTCCCAAGTGCAGCTCAATAATCTTGCCTTTGCCTCTGATGCAGGAAAGTTCTTTGGCTGGATTTCTGGCATGGCTGCTGTTTATCTCCCCCTTTGGCTTGTGCTCATGATTGGTTCGACACTTGGGTTAATTGGTTATGGTGTGCAATACCTCTTCATCACAAAGCAAATCTCCTCTCTTTCCTATTGGCATGTTTTCTTGCTAACTCTTGTGGCAGGGAATAGCATTTGTTGGATTAACACTGTTTGCTATGTTGTCACAATAAGGAACTTCCCTTCTCACCGCCAAGTTGCTGTGGGGTTAACGACTAGTTACCAAGGTTTAAGTGCCAAGATTTACACCAATATTGTTGAAGCTGTTTCTCCACAGCATAAAGCTAAAACCTTTCTTTTCCTAAATGCTGTTTTACCTATCATTGTTACCATAGTATCTGCTCCTTTCGCAAGAGAAATTGAAGTGACAAGACCTAAACACGTGGGAGTTGGATTCATAACAATGTTTGTTGTCACAATCGGCACTGGAATATATGCTGTGACAACCAGCTTGCAGTTTGTAACCAGCAAATTTTCTCCAATCAAAATTCTAATTGGTATTCTAGTGTCCCTTCTCTTGCCTTTGGTGATTCCAGTTTCAATGAAGATCAAAGAGCTAGTTGATTCATGGcaaaaacagagagaaaagCTAAGAGTGTATCATTTAACTGTGGAGGAGAACACTGGTAACCAAGAGAGAATAGAGAATGGggagaaagaaggagaagaagaagaagaagaaagaaatgatgttAGAGAGGAAATTGGAGTGAAGTTAATGCTGAGAAGAATAGATTTCTGGTTATATTactttgtttactttttcGGTGCAACCATTGGATTGGTGTTTCTGAATAACTTGGGGCAGATAGCTGAATCTCGTGGCTGCTCTGGCACCTCTTCATTGGTGTCtctgtcttcttcttttggctTCTTTGGCCGTCTCTTACCTTCCTTAATAGACTACTTCCACAGGGGTAAGAGTCCAATTTCAAGACCAGCTTCTATTATGGTATTGATGGCTCCAACCACAGGAGCATTCTTCTTGCTTCTCAACAAAAGTGACCTCATTCTCTATGTCAGCACTGCCATAATAGGAGTGTGCACTGGGGCAATCACTTCCATTGCTGTGTCCACAACCACAGAGTTATTTGGGGCAAAGAATTTCTCTGTGAACCATAATGTTTTGGTGGCCAACATTCCCATGGGCTCCTTTCTCTTTGGCTACTTGGCTGCACTTCTCTACAGAAAAGAAGGACAGGTTCATGGGAAATGCATGGGCATAGAATGCTACAGAGACACTTTCATCATCTGGGGTTCACTTTGCTGTTTTGGGACTTTCTTAGCTTTGATCCTGCATGCTAGGACTCGCACGTTTTACTCACATAGACACTA 1550 0.4006 MPSSTALQWLSLVGIIWLQAINGTNTDFPAYSSQLKQFLSMSQVQLNNLAFASDAGKFFGWISGMAAVYLPLWLVLMIGSTLGLIGYGVQYLFITKQISSLSYWHVFLLTLVAGNSICWINTVCYVVTIRNFPSHRQVAVGLTTSYQGLSAKIYTNIVEAVSPQHKAKTFLFLNAVLPIIVTIVSAPFAREIEVTRPKHVGVGFITMFVVTIGTGIYAVTTSLQFVTSKFSPIKILIGILVSLLLPLVIPVSMKIKELVDSWQKQREKLRVYHLTVEENTGNQERIENGEKEGEEEEEERNDVREEIGVKLMLRRIDFWLYYFVYFFGATIGLVFLNNLGQIAESRGCSGTSSLVSLSSSFGFFGRLLPSLIDYFHRGKSPISRPASIMVLMAPTTGAFFLLLNKSDLILYVSTAIIGVCTGAITSIAVSTTTELFGAKNFSVNHNVLVANIPMGSFLFGYLAALLYRKEGQVHGKCMGIECYRDTFIIWGSLCCFGTFLALILHARTRTFYSHRH 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00088 516 MobiDBLite consensus disorder prediction 282 301 - -
Bva10g00088 516 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 515 - -
Bva10g00088 516 SUPERFAMILY MFS general substrate transporter 7 509 IPR036259 -
Bva10g00088 516 Pfam Nodulin-like 8 251 IPR010658 -
Bva10g00088 516 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 515 - -
Bva10g00088 516 Coils Coil 286 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00088 Bva-Chr10 2351115 2353724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00088 3 515 Nodulin-like Gene Family AT2G30300 49.046 1.29e-153 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00088 - - gmx:100808034 741.495