Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00061 ATGGCCTCTTCTTCTGGTAGCTTAGATACCTCTTCGAATTCTCACTCAAGTTTCAGTTTTTCCACTTACCCATTCATGACCACTTCGTTCTCCGACCTCCTTGCTTCTCCGGCGGCCGATGACAGCTCCGCCGCCGCCAGAAACACTGCCGGTGATAAGCCACGTGGGTTTTCGGAGCGTATAGCAGAACGAAATGGGTCGGGTGTGCCGAAATTCAAGTCGATCTCACCTCCTTCTCTGCCTCTCTCTCCTCCTGCCATTTCTCCCTCTTCTTATTTTGCTATCCCTCCTGGGTTGAGCCTAGCTGATCTTCTCGACTCGCCGGTTCTCCTTAACTCTTCTAACATTCTTCCATCTCCAACTACTGGAGCATTTGCCGCTCAGGCCTACAATTGGAAGAGCAATTCTGCAGCAAACCAGCAAAGCATCAAAGAAGAAGACAAGAACTTTTCAAGTTTCTCTTTTCAACCTCAACCAAGGCCTCCTGTTCCATCCACAACTGCTTATCAATCTTCCAATACCGCAATTCAAACTCAACAGGCATGGGGTTTTCAGGAAAATACCAAGcaagaaaatttctcaaagGGTATGGTAAAAACCGAAAACTCTTCGATGCAGAGCTTTTCTCCTGAAATTGCTAGTGTCCAAACAAACAATAGCAGTGGATTCCAATCTGATTATAGTAACAATTACCACCCTCAATCTCAAACATTGAGCAGAAGATCAGATGATGGATATAATTGGAGAAAATATGGGCAAAAGCAAGTGAAAGGAAGCGAAAACCCGAGAAGTTACTATAAATGCACATACCCCAATTGCCCAACAAAGAAGAAGGTTGAGAGATCATTAGATGGGCAAATTACTGAGATAGTTTACAAGGGTACTCATAACCATCCCAAGCCTCAGTCTACCAGGAGAAACTCATCGTCTGCATCTTCTCATGCACTTGTGCCTTCAAATCCTGTCATTGCTGAAATCCCAGATCATTCATTTGCCACCCATGGCAATGGACAAATGGATTCCGTGACAACACCTGAGAACTCATCAATATCAATGGGAGATGATGATTTTGAGCAGAGTTCCCAGAAGAGTAAATCAGGTGCAGAGGAATATGATGAAGATGAACCAGATGCCAAAAGAtgGAAAATAGAGGGTGAAAATGAGGGGATATCAGCGCCTGGAAGCAGAACAGTGAGAGAACCCAGGGTTGTCGTTCAAACAACCAGTGACATAGATATTCTAGATGATGGGTATAGATGGAGAAAATATGGGCAGAAAGTGGTCAAGGGCAATCCAAATCCAAGGAGTTATTACAAATGTACATGCCCTGGATGCCCAGTGAGAAAGCACGTAGAAAGAGCCTCTCATGATCTAAGAGCAGTAATCACAACCTACGAAGGAAAGCACAACCATGACGTACCTGCAGCCCGTGGCAGTGGCGTCAACTCCATGAACAGACCTGGGCCAGGCATTTCCACAAACACCTCCAATGCAATGAGGCCAGCAGCTATGACCCACCACCAAACTAATAATTCTATCCAGAGCTTAAGAGCTCCACAACCAGTACCAGCATCAGCACATGAAGGGCAATCACCCTTCACCCTAGAAATGCTGCAGAGCCCTGGTAGTTTTGGGTTCTCAGGGTTTGGGAACCCAAGAAGTTCATACATGAACCAGCAACCATTATCTGACAATGCATTTTCCAATTCTCCCAAAGCCAAGGAGGAGCCGAGAGATGACAATTTGTTTTTAGAATCTTTGCTGTGctg 1769 0.4488 MASSSGSLDTSSNSHSSFSFSTYPFMTTSFSDLLASPAADDSSAAARNTAGDKPRGFSERIAERNGSGVPKFKSISPPSLPLSPPAISPSSYFAIPPGLSLADLLDSPVLLNSSNILPSPTTGAFAAQAYNWKSNSAANQQSIKEEDKNFSSFSFQPQPRPPVPSTTAYQSSNTAIQTQQAWGFQENTKQENFSKGMVKTENSSMQSFSPEIASVQTNNSSGFQSDYSNNYHPQSQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSLDGQITEIVYKGTHNHPKPQSTRRNSSSASSHALVPSNPVIAEIPDHSFATHGNGQMDSVTTPENSSISMGDDDFEQSSQKSKSGAEEYDEDEPDAKRWKIEGENEGISAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTCPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGVNSMNRPGPGISTNTSNAMRPAAMTHHQTNNSIQSLRAPQPVPASAHEGQSPFTLEMLQSPGSFGFSGFGNPRSSYMNQQPLSDNAFSNSPKAKEEPRDDNLFLESLLC 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00061 589 ProSiteProfiles WRKY domain profile. 243 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva10g00061 589 MobiDBLite consensus disorder prediction 41 80 - -
Bva10g00061 589 MobiDBLite consensus disorder prediction 137 156 - -
Bva10g00061 589 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 53 563 - -
Bva10g00061 589 MobiDBLite consensus disorder prediction 358 386 - -
Bva10g00061 589 MobiDBLite consensus disorder prediction 297 317 - -
Bva10g00061 589 SUPERFAMILY WRKY DNA-binding domain 241 301 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva10g00061 589 MobiDBLite consensus disorder prediction 198 246 - -
Bva10g00061 589 MobiDBLite consensus disorder prediction 137 174 - -
Bva10g00061 589 SMART WRKY_cls 242 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva10g00061 589 SMART WRKY_cls 414 473 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva10g00061 589 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 53 563 IPR044810 GO:0003700
Bva10g00061 589 MobiDBLite consensus disorder prediction 544 582 - -
Bva10g00061 589 MobiDBLite consensus disorder prediction 508 529 - -
Bva10g00061 589 MobiDBLite consensus disorder prediction 292 395 - -
Bva10g00061 589 MobiDBLite consensus disorder prediction 544 570 - -
Bva10g00061 589 MobiDBLite consensus disorder prediction 334 357 - -
Bva10g00061 589 ProSiteProfiles WRKY domain profile. 409 474 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva10g00061 589 Pfam WRKY DNA -binding domain 415 471 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva10g00061 589 Pfam WRKY DNA -binding domain 243 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva10g00061 589 Gene3D WRKY domain 228 302 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva10g00061 589 SUPERFAMILY WRKY DNA-binding domain 406 474 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva10g00061 589 Gene3D WRKY domain 401 467 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva10g00061 589 MobiDBLite consensus disorder prediction 198 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00061 Bva-Chr10 1921029 1924033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00061 69 588 WRKY Transcription Factor Family AT2G38470 45.725 3.40e-117 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva10g00061 WRKY 1.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00061 K13424 - gmx:100127393 805.438